Asterias amurensis (Northern Pacific seastar): 139953146
Help
Entry
139953146 CDS
T10870
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 39-like
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139953146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aamu03041
]
139953146
Spliceosome [BR:
aamu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
139953146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
139953146
NCBI-ProteinID:
XP_071808668
LinkDB
All DBs
Position
21:complement(10306752..10323282)
Genome browser
AA seq
513 aa
AA seq
DB search
MADTKTGVKRKLVDVPDDFSDSDDEIAPVKDPKVDKSRSCPYLDTINRRVLDFDFEKLCS
VSLSHLNVYACLVCAKYFQGRGRKSHAYTHSVQINHHVFLNLHTLKFYCLPDNYEIIDSS
LEDITYVLRPTFTKDDIENLDSNTKLSRAYDKTTYLPGIVGLNNIKANDYCNVLLHALAH
IVPLRNYFLEEKNYINIKLPPGDIMCLLSQRFGELMRKMWNPRNFKAHVSPHEMLQAIVL
CSKKRFQITKQGDPVEILSWFLNALHASLGGTRKAKSSIVYGTFQGRMKVFTKKIIPMDT
PEKDKEELLKTEEYKETVTETPFLYLTLDIPQAPLFKDELEQNIIPQIPLSSLMTKFDGV
SEKEYKTYKDSTIKRFQLTRLPPYLILCMKRFNKNLFFIEKNRTIVNFPIKNMDFTEYLS
KDPEVQKRNPSASYDLIANIVQDGEPGPGKGTYRAHVLHKSTGKWHEIQDLHVADILPQM
ITLSEAYIQIWERKDRKAEEGDEKPKTQRQPEN
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaccaaaacaggagtgaaacggaaactcgttgatgttccagacgatttctcc
gatagtgacgatgaaattgctccagtgaaggatcccaaagttgacaaaagcagaagctgc
ccttacctcgatacaatcaataggcgagtcttagattttgattttgagaaattgtgctca
gtctccctgtcccatctgaacgtgtatgcttgccttgtatgtgccaagtactttcaagga
cgagggaggaagtcccatgcctacacccacagtgttcagatcaaccatcatgtcttcctt
aatctacataccctcaagttctactgcctgccggataactatgaaattattgactcatca
cttgaagatattacgtacgtcctgagacccacctttacgaaggatgacattgagaatctt
gacagtaacaccaagttgtctagagcttatgacaagacaacgtatcttccgggcattgta
ggtctcaacaacatcaaagcaaatgactactgcaatgtgttgctccatgccctcgcacac
attgtccccctccggaactactttcttgaagagaagaactacattaacatcaagctccca
cctggtgacatcatgtgcctgctgtcgcagcgtttcggggagctcatgcgtaagatgtgg
aatccccggaacttcaaggcccatgttagtccacacgagatgctgcaggccatcgtcttg
tgcagtaagaagagattccagatcacaaaacagggtgatccagttgagatcctctcctgg
ttcctcaatgcccttcatgcttcgctcggcggaacaaggaaagccaagagtagcatcgtc
tacggtacattccagggtagaatgaaagtattcacaaagaaaatcatccccatggataca
ccggagaaagacaaagaagaactgctcaaaacagaagaatataaagagaccgtgacagag
accccctttttgtacctaacgttggacattcctcaagcgccactgttcaaggatgagctt
gagcagaacatcatcccacagattccattatcttcactcatgacaaagtttgatggagtt
tctgaaaaggagtacaagacctacaaagactcgaccatcaagagatttcagctgactcgt
ctacctccttacctcattctgtgcatgaaacgattcaacaaaaacctcttctttattgag
aagaatcggaccattgttaacttccctattaagaacatggatttcaccgagtacctatcc
aaggatcctgaggttcagaagagaaatccttcagccagctacgatctgattgctaacatc
gtacaagatggggaaccaggaccagggaaaggcacttacagggctcatgtattacacaaa
agtacgggtaaatggcacgagattcaagatcttcatgtagctgacattctaccccagatg
atcacattatcagaagcatatatacagatttgggagaggaaagatagaaaagctgaagaa
ggagatgagaaaccaaagacacaaagacaaccagaaaattga
DBGET
integrated database retrieval system
