Asterias amurensis (Northern Pacific seastar): 139953751
Help
Entry
139953751 CDS
T10870
Name
(RefSeq) histone deacetylase 6-like isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aamu01009
]
139953751
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamu03019
]
139953751
04131 Membrane trafficking [BR:
aamu04131
]
139953751
03036 Chromosome and associated proteins [BR:
aamu03036
]
139953751
Enzymes [BR:
aamu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
139953751
Protein phosphatases and associated proteins [BR:
aamu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139953751
Messenger RNA biogenesis [BR:
aamu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
139953751
Membrane trafficking [BR:
aamu04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
139953751
Chromosome and associated proteins [BR:
aamu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
139953751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
139953751
NCBI-ProteinID:
XP_071809403
LinkDB
All DBs
Position
2:17663956..17727579
Genome browser
AA seq
1139 aa
AA seq
DB search
MIEDTSTFPTMETPAVEPAGQDAQSKGEASPQQTSAQSQQDEHPPQGASDHQPTTEDKNC
GKRVSSGKKGSKMGTRSKSGIQAMKQKGREAVKRSGNEDDLAAQIAGMTISDTPKAFPQG
TGLVYDERLTQHACPFNSRHFQSENGERILQCHKRLQHYNLLDRCTRVPVRLASDEEVLT
KHSSEYLESVKSTQTMSDNELKDWANQVSDIFVNNHSYECAALAVGGMLDLTEKVVKGEL
RNGFAIVRPPGHHATRSKADGYSLFNTVAITAQTAKHQWNCERVLIVDWDVHHGQGVQYH
FEDDPSVLYFSIHRYEHQEFWPCLKDSDCDAVGKGKGVGFNINVPWNEIGLGDSEYLAAF
QQILLPVAYEFNPHLVLVCCGFDAAIGDPKGEMQVTPAGFAHLTHALMGLADGKVVLALE
GGYNLKVIGECAAMCTQTLLGDPCPVLPKTTEPSKSAVESILNVIKNIRPYWSSLKYQVD
PECLQSKVVSSSSLNEPLLRDDQSPESKTTTGPEPEEIDKLIDKLIAEIDLTVPKNRTCL
VYDEEMMRHKTALPWQLTTILVTGSVNFFSQHPERPDRIARIFSKHKELGLVQRCLRVES
RRATKNELHQCHSAKHIERLEAMQSNTPRELNKMQDDFKSIYLHQSSFDCARLAAGSTLN
VVDTVLSGQARNGVAIVRPPGHHAESHTAMGFCFFNTVAIAARYAQQKHGLKRVLILDWD
VHHGNGTQHMFENDPSVLYVSLHRYENGLFFPSSPDAGPDMAGEGAGEGFNVNIGWNVEV
MGDAEYLAAFMQVVMPIAYEFCPDLVLVSAGFDAAYGDPLGGYKVTPEGYAHMTHMLCNL
AKGKVIVVLEGGYNLNSISQSMAMCTRILLGDPCPAIDPGLPSHNAVKSILETLHVHRKY
WKSLKYQVNLPSLPPCEPVEVTSTKSETKCLPSSNLSEDVGGGDSEVSTTTSRMSPSDAI
PMQSSTEESPVTDPSPVSTVGGPVTGSDESQNLETLGAAASGAEAGAMAAGGKPATIVEL
FGPEAQLHAVVPLTWCPHLDSHVLPNPPSMPISSSDPCLECQDTSENWVCLHCYKVLCGR
YVNEHMLFHSIDTSHLMVLSYADLSVWCYGCDSYVHNEIVFPAKRAAHISKFGCDVPGM
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagacactagcacgtttccaaccatggagacaccggctgttgaaccagctgga
caggatgcacaatccaaaggagaagcgtcacctcagcagacctcagctcagtctcaacaa
gatgaacatccaccacaaggtgcatctgaccatcaaccgacaactgaggataagaactgt
gggaagagagttagttctgggaagaagggaagcaaaatgggtactcgctctaagtcaggg
attcaggccatgaagcagaaaggcagagaggctgttaaacgaagcggaaatgaagacgat
ctcgctgcacagattgctggaatgacaatttcagatacaccaaaggcttttccacaaggg
actggcctggtgtatgatgagcgtttaacccaacatgcatgcccctttaatagtaggcat
tttcaaagtgaaaatggcgagcgaattctacaatgtcacaaacgacttcaacactacaac
cttctggacaggtgcactagagtgccagtccgtttagcttctgatgaggaagttcttaca
aagcacagttcggaatacttggagagtgtgaaatctactcagaccatgtcagataatgag
ctgaaagattgggccaaccaggtttccgacatctttgtcaacaatcattcgtatgaatgt
gcggcgctagcagttggtggaatgctggatctgacagaaaaagtggtcaaaggagaactt
cgcaatggttttgctattgttcggccgcctggtcatcatgctacaaggagtaaagccgat
gggtatagtctttttaacactgtggctattacagctcagactgcaaagcatcaatggaac
tgtgaaagggtactgattgttgactgggatgttcaccatggacagggagtgcagtaccac
tttgaagatgacccaagtgtattatacttttccattcatcggtacgagcatcaggagttc
tggccttgtctaaaagattccgactgtgatgccgttgggaaggggaaaggtgttggcttc
aacatcaatgttccctggaatgagattggattgggggacagtgagtacctggctgccttt
cagcagatactcctgccagtggcatatgagttcaatccacatttggttcttgtctgctgt
gggtttgatgctgcaattggggacccaaagggtgaaatgcaagtgaccccagcaggattt
gctcatctcacccatgctctgatggggctagctgatgggaaagtggttttagcccttgag
ggtggatacaatttgaaggtgattggtgagtgtgctgctatgtgtacacagacattgctg
ggggatccctgcccagtgcttccgaaaaccactgaaccaagtaagagtgctgtggaatcc
attcttaatgtgattaaaaatatcagaccttattggagtagcttgaagtaccaagttgac
ccagagtgtttacaaagtaaggttgtgtcaagttccagtttaaacgagccactcctccga
gatgaccaatcacctgagagtaaaactaccacgggtccagagcctgaagagattgacaag
ttgattgacaagttgatagcggaaatagacttgaccgtccccaaaaacaggacctgtctc
gtatatgatgaggaaatgatgaggcataagacagctttaccatggcaactaacaaccatt
ctagtgactggttctgtcaactttttcagccaacacccggagagaccagacagaatagcc
aggattttttcaaaacacaaagaattgggccttgtccaaaggtgtctcagagttgagtca
agacgagcaactaaaaatgaacttcaccaatgccatagtgctaagcacatagagagacta
gaagcgatgcagtcaaacacacctcgagaactcaacaagatgcaagatgacttcaaatct
atctacctacaccagagttcttttgactgtgcacgtcttgccgctggttccacgctgaat
gttgtcgacactgttctctctggccaggcaagaaatggagtggccattgttcggccgcct
ggtcatcatgcggagtctcacactgcgatgggattttgtttcttcaacacagtagctata
gcagcacgctacgcccagcagaagcatggactcaaaagggtgttgatccttgactgggac
gtccaccatggtaatggtacccagcacatgttcgaaaacgaccccagcgttctgtatgtg
tcgttgcatcgctatgagaatggtttgttcttccctagttctccggatgccggaccggat
atggctggtgagggagccggtgaggggttcaacgtcaatattggatggaatgtggaagta
atgggagatgcagaatacctagctgcctttatgcaagttgtcatgccgatagcatatgag
ttctgtcctgacttggtgttggtgtctgctggttttgatgcggcgtatggtgatccactg
ggaggatacaaggtaacaccagagggctatgcccatatgacacacatgctgtgtaatctc
gcaaaaggaaaggttatcgttgttctagagggtggatacaatctaaactctatatcccaa
tccatggctatgtgtacaaggatccttcttggtgatccctgcccggccatcgacccaggg
ctccctagtcacaatgctgtcaaatctattttggaaacccttcatgttcatcggaaatac
tggaagagcctgaaatatcaagttaacctaccaagtctacctccctgtgaaccagttgaa
gtgacgagcacaaaatctgagaccaagtgtcttccatcatccaatctatcagaagacgta
ggaggtggtgattctgaggtatccaccaccacttcaagaatgtctccgagtgatgctatt
cccatgcagagttctaccgaagaatctcccgtcacggacccttccccagtgtccaccgtg
ggtggacctgtcacaggaagtgatgaaagccagaatcttgagacattgggcgcagccgcc
agtggagcggaggcgggggcaatggccgcgggtgggaagccggccacaatcgtagaactg
ttcgggccggaggcacagttacatgctgtagtgcccttaacctggtgcccgcatctagat
agtcatgtcttaccaaacccaccttcaatgcctataagttccagcgacccgtgtttagaa
tgccaggatactagcgaaaattgggtatgtctgcactgctacaaggtcctgtgtggtcgt
tatgtcaacgagcatatgctcttccacagcatagatacatcgcaccttatggtactgagc
tatgcagatttatcagtgtggtgctacggatgtgattcctatgtgcacaacgagattgtt
tttccagcgaagagggcagcacacatcagtaaatttggctgcgatgtccctggcatgtga
DBGET
integrated database retrieval system
