Asterias amurensis (Northern Pacific seastar): 139953917
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Entry
139953917 CDS
T10870
Name
(RefSeq) DNA topoisomerase 3-beta-1-like
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
aamu Asterias amurensis (Northern Pacific seastar)
Pathway
aamu03440
Homologous recombination
aamu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aamu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
139953917
03460 Fanconi anemia pathway
139953917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aamu03032
]
139953917
03400 DNA repair and recombination proteins [BR:
aamu03400
]
139953917
Enzymes [BR:
aamu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
139953917
DNA replication proteins [BR:
aamu03032
]
Eukaryotic type
DNA Topoisomerases
139953917
DNA repair and recombination proteins [BR:
aamu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
139953917
FA (Fanconi anemia) pathway
139953917
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
API5
Ig_Dlec1_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
139953917
NCBI-ProteinID:
XP_071809621
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Position
22:3902256..3922237
Genome browser
AA seq
858 aa
AA seq
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MKTALMVAEKPQLAHALAKILSRGNLNSRKASNGVCSVHEYIGVFRGESCKFKFTSVCGH
VMGLDFNSRFNNWDRVDPAELFDAPTEQKEANAKLSIPRVLQQEGRGVDYLILWLDCDKE
GENICFEVVDCVQPVMNKTSMSQQTVFRARFSAITDTDVRGAMDRLVEPNKNEALSVDAR
QELDLRIGCAFTRYQTKFFQGKYGDLDSTLISYGPCQTPTLGLCVNRHDKIQEFKPEPFW
IIHTEVAHPSGRNLTLDWDRVRMFDRDIAQMFLNLVKGQKDAKVTGVTQKEKVKQRPQAL
NTVELMRIASASLGMSPHHAMQIAERLYIQGYISYPRTETTHYPENFDLIGTLKQQLSGP
WNSEIRDLLNKGINRPRKGNDAGDHPPITPMRSASESEIGGEAWRLYEYIVLHFIATISY
DCKYLQKTITFLINEEKFSCTGKTVIDPGYTTFMKWQAMNTMETLPVVQTGDVCTLNEAK
LVERQTSPPDYLTESELITLMEKHGIGTDASIPVHIENICQRNYVKVESGRRLVPTRLGI
VLIHGYQKIDADLSLPTMRSNVEEQLNLIAHGKIDYHVVLRHTLDIFTRKFQYFVEQIQG
MDELFEVSFSPLAATGKPLSRCGKCHRFMKYISAKPCRLHCAQCEETYTLPQNGTIKLYK
EITCPLDDFELVMWSSGPKGKSYPVCPYCFSNPPFPEMRKGMGCNECTHPTCSHSIIKLG
VAQCIECENGVMVLDPSSAPKWRLACNKCNVIMNIFEDAHRITVDKNHCETCEASILNVD
FNKSKTPLANNETHHSGCMFCDPVLLPLIEAKHASIRRGGRGGRGGRGRGRGRGRGRGRG
RGGKAPKDKMSQLASYFV
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagctttaatggtggctgagaagcctcaacttgctcatgccttggccaaaatt
ttgtcgcgaggcaatctgaattcgaggaaggcgtcaaatggcgtatgctccgtgcatgaa
tacatcggcgtcttcaggggagagtcgtgcaagttcaagtttacctctgtgtgtggccat
gtgatgggcttggacttcaattcccgtttcaataactgggacagagttgacccagcggag
ttgtttgacgcccccactgagcagaaggaagccaatgctaagttgtcgatcccaagagtc
ctacagcaagagggtcgaggggtggactacctgatcttgtggcttgactgtgacaaagaa
ggggagaatatttgctttgaggttgtagactgtgttcagcccgtcatgaataaaacctca
atgagccaacagactgtattccgagctcgttttagtgccatcaccgatactgacgttagg
ggagcaatggacagacttgtcgaaccaaacaagaacgaggcgttgtccgtcgacgccagg
caggaattggaccttcggattggttgcgccttcaccagataccaaaccaaattcttccag
ggtaaatacggagatttagacagtactcttatctcgtacggtccgtgccaaactccaacc
ttgggtctgtgcgtcaaccgtcatgataagatacaggagttcaagccagaaccattctgg
atcattcataccgaggttgcccatccaagcggtaggaatctcactctggattgggacaga
gttaggatgtttgatcgagatatcgcacagatgttcctgaacctggtcaagggacaaaaa
gacgccaaggtaactggtgtgacacaaaaggagaaggttaaacagcgccctcaagcactg
aacacggtagagttgatgcgtattgcgagcgcctcgttaggtatgagtccccatcatgca
atgcagattgcggagaggttgtatattcaaggttacatcagctatccacgtactgaaaca
acgcactacccggaaaactttgatctcatcggaactcttaaacagcaactctccggccca
tggaactctgagatcagggatctactcaacaaagggatcaatcggccgaggaaagggaac
gacgcaggggaccatcctcccataacacccatgagaagcgcaagcgagagcgagatcgga
ggggaggcttggagactgtatgaatatatcgtcttacattttatcgctacgatcagttat
gactgcaagtatctccagaagaccatcactttcctgatcaacgaagagaagttttcttgt
acggggaagacggttattgatcctggatatacaacgttcatgaaatggcaagcaatgaac
acgatggagacacttcctgtggttcaaacaggagacgtttgcaccctcaacgaggctaag
ctcgtggagcgacagacaagtccaccagactaccttacagagagtgaattgattactcta
atggagaaacatggtatagggaccgacgccagcataccggtacacattgagaacatctgc
caacgtaactacgtaaaggtggagagtggacgacgactggtacccaccaggctgggtatt
gtgctcattcatggataccaaaagatcgatgcggacttgtctttgccgacgatgcgctca
aacgttgaagagcagctaaacctgatagctcacgggaagatcgactaccacgtggtgcta
cgccacaccctggacatcttcactaggaagtttcagtattttgtggagcagattcaggga
atggatgagctgtttgaggtgtcgttctctccgttggcggctaccgggaagccactatca
agatgtggtaagtgtcatcggttcatgaagtacatctcggccaagccttgtcgtctccat
tgcgcacaatgtgaggagacttacaccctaccccagaatggaaccatcaagctctacaag
gagatcacgtgcccactggatgactttgagcttgtgatgtggtcttcaggacccaaagga
aagagttacccagtctgcccgtattgcttcagcaaccccccgttccctgagatgaggaaa
gggatggggtgcaacgaatgcactcatccaacctgttcccattcaatcatcaaactgggc
gtggctcagtgcattgagtgtgagaatggagtcatggtactagatccctcatcagcgcca
aagtggagactcgcttgcaataagtgtaatgtgattatgaatatatttgaagatgctcat
cgaataacagttgacaagaaccattgtgagacgtgtgaagcatcaatactcaacgtcgac
ttcaataagtccaagacaccgttagcaaacaacgagacacatcactcaggctgcatgttc
tgtgatccagtacttcttccgttaatcgaagccaaacacgcaagcatccgccgtggagga
aggggcgggcgtggtgggaggggaaggggtagagggaggggtaggggaagagggcgtggt
cgaggggggaaggcacctaaggataagatgtctcagctagcttcttattttgtttag
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