Anoxybacteroides amylolyticum: GFC30_1056
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Entry
GFC30_1056 CDS
T04397
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB, AddB subunit
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
aamy
Anoxybacteroides amylolyticum
Brite
KEGG Orthology (KO) [BR:
aamy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aamy03400
]
GFC30_1056 (addB)
Enzymes [BR:
aamy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GFC30_1056 (addB)
DNA repair and recombination proteins [BR:
aamy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
GFC30_1056 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
KIX_2
Motif
Other DBs
NCBI-ProteinID:
ANB60835
UniProt:
A0A160F4W1
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All DBs
Position
1001413..1004901
Genome browser
AA seq
1162 aa
AA seq
DB search
MSLRLIIGRAGSGKTTQCFAEIRQQLRKQPAGSPIIYLVPEQMTFQSEYALVKTPGLGGM
IRAQVLSFTRLAWRVLQETGGMSRYHLNETGVRMLLRKIVEKKKEELVLFARAADKHGFI
EQLEEMLIECKRYCITPIQLEQTEKQLRYRASASEKVLADKLKDLRLIYEEFEHQLMQRY
VDSEDYLRLLAEKIQKSRYIQEADIYVDGFHHFTPQEYMVLEQLLCHAKRVTVALTVDAP
YNEHLPHDLHLFRMTGKTYHDLRNLALLNNVQIEEVEIRSENVRHGSESLRHLEKYYDVR
PAVAFPHACQSIQICQAANRRAEVEGIAREIIHLVRDEGYRYRELAVLVRNAEDYHDLVR
TIFTDYNIPYFIDEKESMMHHPLIELIRASLEAIHTNWRYEAIFRAVKTDLFFPLESDIH
AMREAIDQLENYVLAQGIYGTKWLERWTYRRYVGLDGISIPQTNEEKAMEEKLNEWREMI
AAPLHALQKRLKKAKTGRDMCEALYLYFEQLQIPKKLEKLREEAEQSGQLLQARYHEQAW
GAVIELLDQYVEILGDDTSPVKLFATIIDTGLESLQFSLVPPAIDQVLIAHFDRSRLTDV
KCVFIIGVNEGVIPAKKNDDGMLSEQDRELLEHFSVHVAPSSRKQLLDEPFSLYLALASP
SERLYVTYPLADEDGKSLLPSLMIKRIKEMFPAVVEKQWGNEPLSLSLEEQMSFITNYLT
TLPSLAMQLQAWKRQYRIEPIWWDVYNCYAENGEWKERAKKIVNALFYENKPKKLEKAIG
AKLYGKKIKASVSRVEQFNRCPFAHFVSYGLRLKERNIFRLEAPDVGQLFHYALKMITDR
IRIEKLNWATLSTQTCNQLAHDAVEQIAPYIQQEILLSSHRYHYVKRKLERIMARTTSVL
SEHAKRSGFAPLEVELQFGDDGPLPPLRIPLADGTVLELVGRIDRIDRAESSRGVLLRVI
DYKSSNKKLDFTEVYYGLTLQMLAYLDVILEYAEQLVGTNALPAGVLYFHIHNPIIKSTN
GLLKAEDAEQKIFESFKMNGLLLDDYETIQLMDTTMDAGKGSAIVPVKINKDGSVSKTSA
VVSEEEFALLRRHVRTIFQQVGAQMVDGVVDIAPYKRKDETACKYCEFKAVCQLDEALDQ
DRYRLLKNATLDALHKTEGENQ
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttcgcttaatcatcggaagagcgggaagtggaaaaacgactcaatgtttcgct
gaaattcgccaacagctcaggaagcaaccggctggctcgccaattatttatctcgtgcca
gaacaaatgacctttcaatcagagtatgcgcttgtaaaaacgccgggacttggcgggatg
attcgtgcccaagtattaagctttactcggcttgcgtggcgagtattgcaagaaacaggg
gggatgagccgctaccatttaaacgaaacgggcgtacgcatgttattaagaaaaatcgtt
gaaaaaaagaaagaagagcttgtgttgtttgcacgggcagcagataagcatggctttatc
gaacagttagaagaaatgctgattgaatgtaaacgatattgtattaccccaattcagctt
gagcaaacggaaaaacagttgcgttatcgtgcgagcgctagcgaaaaagtgctagccgat
aagctgaaagatttacggctcatttatgaagaatttgaacaccaactaatgcaacggtac
gtcgattcggaagattatttacggttattagcagaaaaaattcaaaaatcgcggtacata
caagaggccgatatctatgtggacgggtttcatcattttaccccacaagaatatatggtg
ctcgaacaactcttatgtcacgccaaacgagtaacggtggcgctaacggtcgatgccccg
tataacgaacatcttccacatgatttgcatttatttcgcatgacaggaaaaacgtatcat
gaccttcggaatctcgcgcttttaaataacgtacagatagaggaagtagaaatacgaagc
gaaaatgttcgccacggaagtgaatcgttgcgccatttagaaaaatactatgacgttcga
ccagccgttgcctttccacatgcttgccaatcgatccaaatttgccaagctgctaatcgt
cgcgcggaagtggaagggattgcgcgcgaaatcattcatcttgttcgcgatgaagggtat
cggtatcgcgaattggctgttttagtgcgcaacgccgaagactatcacgatttagttcgc
acgatttttactgattataatattccatattttatcgatgaaaaagaatcaatgatgcac
catccgttgatcgaactaattcgcgcaagtttagaagcgattcatacaaactggcgatac
gaagccatatttcgcgcagtgaaaacggacctcttttttccactagaaagcgatatccat
gcgatgcgtgaggcgatcgatcagctagagaactacgtcttagcgcaagggatttacgga
acaaaatggcttgagcgatggacgtatcgacgttacgtcgggcttgatggcatttccatt
ccacaaacgaacgaagaaaaagcaatggaagaaaagttaaacgaatggcgcgaaatgatt
gccgctccgcttcatgcactgcagaaacggctaaaaaaagcgaaaacagggcgtgacatg
tgtgaggcgctctatttatactttgagcaacttcaaatccccaaaaaattagaaaagctg
cgggaggaagcagaacaaagcgggcaattgcttcaagcgcgctatcacgagcaagcatgg
ggtgcagtgattgagctacttgaccagtacgtagaaattcttggcgacgacacatcgccg
gtaaaactatttgcgactattatcgatacgggattggagagtttgcaattttcactcgta
ccgccagccattgaccaagtgctcattgcccattttgatcgatcccgacttacggacgtg
aaatgtgtatttatcattggggtcaacgaaggagtcattcctgcgaagaaaaatgatgac
ggtatgttatcggaacaagaccgcgaattgctggaacatttttctgtgcatgttgctcca
tcaagccgaaagcaattattagatgagccgttttccctttatttagcgcttgcaagccca
agcgaaaggttgtatgtgacctatcctttagcagatgaagacgggaaatcactattgccg
tcgcttatgattaaacgaataaaagaaatgtttccggcagttgtcgaaaaacaatggggg
aacgaaccgcttagcctgtcgttagaagaacagatgtctttcattacaaactatttaacg
acgctcccatcactagcaatgcaactgcaagcatggaagcggcaatatcgtatcgaacca
atttggtgggacgtgtataactgctatgcagaaaacggcgagtggaaagaacgcgccaaa
aaaatcgtaaacgcccttttttatgaaaacaaaccgaaaaaactagaaaaggcgatagga
gcaaagctgtatggcaaaaaaataaaagcgagcgtatcacgggtggaacaatttaaccgc
tgtccgtttgctcattttgtttcttatgggcttcgcttaaaagaacggaatattttccgg
ttagaagcgccagatgttggtcagttatttcattatgcgttaaaaatgattacggatcga
attcgaatagaaaaactaaattgggcaacgttgtctacacaaacgtgtaaccagttagcg
catgacgcggtcgaacaaattgccccatatatccagcaagaaattttgcttagttcccat
cgctaccattacgtgaagcgaaagctagagcgaattatggcgcgaacgacgagtgtgttg
agtgaacatgcgaaacgaagcggttttgcaccgttggaagtagaattgcagtttggggac
gacggtcctcttccgccacttcgcattccgttagcggacggcacagtgctcgaacttgtc
gggcgcatcgaccgaattgaccgagcggaaagttcacgaggcgttttgttgcgtgtcatc
gactataagtcaagcaataaaaaactagactttacagaagtttattatggactgacgttg
caaatgctcgcatatttagatgtcattctcgaatatgcggagcaacttgtcgggacaaac
gcgcttccggcaggcgtgctatatttccatattcataatccaatcattaaaagtacgaac
ggactattaaaagcagaagacgcagaacaaaaaatatttgaaagctttaaaatgaacggg
ctgcttttagacgattacgaaacgattcaactcatggatacgacgatggacgctggcaaa
ggctctgcgattgtgccggtaaaaatcaacaaagacggatctgtgtcgaaaacgtccgca
gtggtgtcagaagaagagtttgcgctactacgccgccatgttcgcaccatttttcaacaa
gtcggtgcacaaatggtggacggcgttgtggatattgcaccgtataaacggaaagacgaa
acagcttgcaaatattgcgagtttaaagccgtttgtcaattagacgaggcgcttgaccaa
gaccgctaccgcctattaaaaaatgctacattggatgcgttgcacaaaacggagggggaa
aatcaatga
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