Anoxybacteroides amylolyticum: GFC30_1057
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Entry
GFC30_1057 CDS
T04397
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB, AddA subunit
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
aamy
Anoxybacteroides amylolyticum
Brite
KEGG Orthology (KO) [BR:
aamy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aamy03400
]
GFC30_1057 (addA)
Enzymes [BR:
aamy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GFC30_1057 (addA)
DNA repair and recombination proteins [BR:
aamy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
GFC30_1057 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Viral_helicase1
DEAD
AAA_12
AAA_30
ResIII
Med9
AAA_11
DUF2059
4HB_KIF14
Mod_r
Motif
Other DBs
NCBI-ProteinID:
ANB60301
UniProt:
A0A160F300
LinkDB
All DBs
Position
1004898..1008581
Genome browser
AA seq
1227 aa
AA seq
DB search
MKKREGVQWTDEQWRAIVTEGAHTLVAAAAGSGKTAVLVERIIQKIIDDEHPVDIDRLLV
VTFTNAAAAEMRQRIAERIERALAETPHSLHLRRQLSLLPKAAISTIHSFCLDVIRKYYY
LIHIDPVFRIADATEIELLKEEVMEELLEEQYAKEENEAFLSVVDRYTSDRTDADLQTMI
LRLYEFSRSHPDPDEWLRELVLLYDIAEGTTIDDLPFTRYLWQHIDFQLQAIRHLLEQAL
EQVHAPNGPMYLRETIETDLEKLKQLEEARHQSWQALHEAVQAFAWQTAKRKPKNETYDE
ALTELAKELRDKAKTKWKEMKDELFSFQPETWLRHLREMKPIVEVLVALVQQFAKQLQKR
KEEKGIVDFSDLEHYCLQILRAPSSTPTTLLPSDAALDYRAQFAEVLIDEYQDVNMVQET
ILRLVIHEEEAAGNLFMVGDVKQSIYRFRLAEPFLFLTKYRRFSPAGKGTGVRIDLAQNF
RSRREILDGTNFIFQQIMGETVGEIAYDDDAALKFGASYYPEKKQPIEWVIIDRGDQGEE
EDEEKELENAELEARWMAQKIKQLIEEPFYVYDRHLQKERRIMYRDIVILLRSMPWAAQI
MEEFRKQGIPLYAELSSGYFSTTEVSVMLSLLKVVDNPYQDIPLAAVLRSPIVGMDENEL
ALLRLEKPKGSFYEALSAFVTKDSPAELHRKAASFVRQLQTWRTTARQRSLAELIWTIYR
DTGFYDFVGGMPGGKQRQANLRALYEKARQFEKTSFRGIFRFLRFIERMQERNDDFGTAR
ALSEQEDVVRLMTIHKSKGLEFPVVFVAGLGKSFNKQDLRRNDLLDKDLGFTAHFVHPDL
RVSYPTLAQLAVKKKQSLELLAEEMRVLYVALTRAKEKLYLVGTTKKLENEKKKWQSIQR
HEDWLLPDYVRASAKNYLDWIGYALIRHADSFPLHQGKVQESDIATHPSCWSVQIVSASE
MYQQTEAPEQTTEQMNELLKQLAPVPLQSNFQEEVKRRMHWQYSYQLSTSFRAKQTVSEL
KRQREMFGVHGDQALMRPFRTEITERPRFMQMKKLSSAEKGTILHLVMQHVDLTKEISET
TLCEQLAKMVHGEWLTEEQAQEVDIASILTFFQTDIGRRLLQAAHVEREVPFSLALSANE
TYAQWNDGEETVLVQGVFDCVFEDEQGLVLIDFKTDHVRWANDVQALINERYRVQMELYR
RAIEHIWKKRVDECYIYVFDCAQLFPM
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacgagaaggagtgcaatggacagacgagcaatggcgagcgattgtcaccgaa
ggggcgcatacgctcgttgccgccgctgcaggttctggcaaaacagcggtgcttgtcgaa
cggattattcaaaaaattattgatgacgagcatccagtagatatcgaccggttgcttgtt
gtcacgtttacgaacgcagcagctgcagaaatgcgtcagcgaattgcggaaagaattgag
cgtgcgctagcagaaacaccgcattcgctccatttgcggcgccagcttagcttgttgcca
aaggcggcaatttctacaatccattcgttttgcctagacgtcattcgtaaatattactac
ttaattcacattgacccagtgtttcgaattgcggatgcaacagaaattgaactgttaaaa
gaagaagtgatggaagagttattggaagagcagtacgccaaagaagaaaacgaggcgttt
ttaagcgtcgttgaccgttatacgagcgaccggacagatgccgatttacaaacgatgatt
ttgcgtttgtacgagttttctcgctcgcatcctgacccagatgaatggcttcgcgaactt
gtgttgttatatgacattgcagaggggacaacgatcgatgatttgccatttactcgctat
ttatggcagcatatcgattttcaattacaagctataaggcatttgctagagcaagcgctc
gagcaagtgcatgcgccaaacggcccgatgtatttacgtgaaacgatcgaaaccgactta
gagaaactaaaacaattagaagaagcacgccaccaatcgtggcaagcgcttcatgaagca
gttcaggcgtttgcgtggcagacggcgaagcgaaaaccgaaaaacgaaacatatgatgaa
gcgttgacggaattagcgaaagagttgcgcgataaggcgaaaacgaaatggaaggaaatg
aaagacgaattgttttcattccagccagaaacatggcttcggcatttgcgggaaatgaaa
ccaatcgtggaagtgcttgttgctctcgttcaacagtttgcaaaacagctacaaaaacgg
aaagaagaaaaagggattgtcgatttttctgacttagagcattactgtttgcaaatttta
cgcgccccttcctcgacgccaacaacgcttcttccttccgacgctgcgcttgattaccgc
gcccagtttgcggaagtgctcatcgacgaataccaagacgtcaacatggtgcaagaaacg
attttacggctagtcattcacgaggaagaagcagcaggcaacttatttatggtgggggat
gtgaagcagtcgatttaccgctttcgtttggccgaaccgtttctctttttaacgaaatac
cgccgattttctccagcaggaaaagggacgggtgttcggattgatttagcgcaaaatttc
cgcagtcgccgggaaattttagacggcacgaattttattttccaacaaatcatgggagaa
acggtgggggaaatcgcgtatgacgacgatgcagcactgaaattcggagcatcctattac
ccggaaaaaaaacagccgatcgaatgggtcattattgaccgcggtgaccaaggggaagaa
gaggatgaggagaaggaactagagaacgcggagctagaggcacgctggatggcgcaaaaa
attaagcaattaattgaggaaccgttttatgtgtatgaccgccatttgcaaaaagaacgg
cgcattatgtatcgcgatatcgtgattttgcttcgttctatgccgtgggctgcacaaata
atggaagagttccgaaaacaaggaataccgttgtatgcagagctgtcgtcaggctatttt
tcgacaacggaagtatccgtgatgctttctttgctaaaagtagttgataacccgtaccaa
gatattccgctcgccgccgtacttcgttccccaattgtcgggatggacgaaaatgaatta
gcgttattgcggctagaaaaaccgaaaggctctttttatgaagcactttctgcttttgtc
acaaaggactcgccagcagaattgcatcgtaaagctgcttcttttgttcgccaattgcaa
acgtggcggactacagcgcggcaacgctcgttagctgaattgatttggaccatttaccgc
gatacagggttttacgattttgttggtggaatgccagggggcaagcaacggcaggcgaat
ttgcgggcgctgtatgaaaaagcgcggcaatttgaaaaaacatcctttcgcggcattttc
cgctttttgcgatttattgagcgcatgcaagagcgaaacgacgattttgggacagcgcgg
gcgctcagtgagcaagaagatgtcgtgcggctcatgacgattcataaaagcaaaggctta
gagtttccagtcgtctttgttgctggattaggaaagagttttaataagcaagatttacgg
cgaaacgacttattagataaagaccttggctttacagcgcattttgttcatccagattta
cgcgtgagttatccaacgctcgcacaattagcggtgaaaaaaaagcaatcgcttgaattg
ttggcagaagaaatgcgtgttttatacgtggcgttaacaagagcgaaagaaaagctatat
ttagtagggacaacaaaaaagctagaaaatgagaaaaaaaagtggcaatcgatacagcga
catgaagattggctgttgccggactacgtgcgcgcttccgcgaaaaattatctcgactgg
attggttatgcacttatccgtcatgccgatagtttcccgcttcatcaagggaaggtacaa
gaaagcgatattgccactcatccgtcttgctggagcgtacaaattgtttctgcttcggaa
atgtaccagcaaacagaagcaccggaacaaacaacagagcaaatgaacgaattattaaaa
caactagcgcccgttccgctacaaagcaattttcaagaagaagtgaagcggcgcatgcat
tggcaatattcttatcagctgtctacttcgtttcgggcgaaacagacagtttccgagtta
aagcggcagcgggaaatgtttggcgttcatggcgaccaagcactgatgcgcccatttcgc
acggaaattacggagcgtcctcgttttatgcagatgaaaaaattaagttcggcggaaaaa
ggaacgattttgcatcttgtgatgcaacacgtcgatttaacgaaagaaatttcagaaaca
acactctgtgaacaactggccaaaatggtgcacggagaatggctgaccgaggagcaagca
caggaagtggatattgctagcattctaacattttttcaaaccgatatcggtcgacggctt
cttcaggcggcacacgtggaacgtgaagtgccatttagcttagcgctttctgccaacgaa
acatatgctcaatggaacgacggggaagaaacggtgctcgttcagggggtattcgactgt
gtttttgaagacgaacagggattagtgctcatcgatttcaaaacggaccatgtgcgctgg
gcaaacgatgtacaagccttaatcaatgaacgttaccgtgtacaaatggaactgtatcgc
cgtgcaatcgaacacatttggaaaaaacgggtcgatgagtgctacatttatgtatttgat
tgtgcgcaactgtttccaatgtag
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integrated database retrieval system
