Anoxybacteroides amylolyticum: GFC30_1560
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Entry
GFC30_1560 CDS
T04397
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aamy
Anoxybacteroides amylolyticum
Brite
KEGG Orthology (KO) [BR:
aamy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aamy03016
]
GFC30_1560 (truB)
Enzymes [BR:
aamy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GFC30_1560 (truB)
Transfer RNA biogenesis [BR:
aamy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GFC30_1560 (truB)
Prokaryotic type
GFC30_1560 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ANB60188
UniProt:
A0A160F1Z4
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All DBs
Position
1494991..1495899
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AA seq
302 aa
AA seq
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MDGVLLLHKPAGMTSHDCVFRIRRLFQTKKVGHTGTLDPDVSGVLPICIGKATRIAEFLT
GATKTYEGEVTLGKATTTEDASGEIVATKPIDRAIPRTEIEHVFQQLTGEIRQTPPMYSA
VKVHGKKLYEYARAGIAIERPSRIVTIHELTLLDDRTVFTGENISFRFRVTCSKGTYVRT
LAVMIGEQLGFPAHMSHLVRTASGAFTLEQCVTFSEIEERIVRGEGECLLLPIEKALFHL
PKYQMHDKVAEKVKNGAILPLPAELQSLEGPVLMVNEKNKAVALYYKHPAKPHLFKPLKV
FS
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
gtggacggggtattattgttacataaaccagccggcatgacgtcacacgattgtgttttt
cggattcgccgtttgtttcaaacaaaaaaagtcggtcatacaggcacactcgacccagat
gtttctggcgtattgccgatttgcattggcaaagcgacaagaattgcggaatttttaaca
ggagcaaccaaaacgtacgaaggggaagtgacgttagggaaggcgacaacaacagaagac
gcttctggagaaatcgttgcgacaaaaccgattgatcgggcgattcctcgtacggaaatt
gagcatgtttttcagcaactaaccggcgaaatccggcaaacaccgccgatgtactccgca
gtgaaagtacacggcaaaaaattgtacgaatacgcgcgggctggcatcgcgattgaacgt
ccgtcgaggatcgtgactattcacgaattgacgttattggacgatcgaacagtttttaca
ggagaaaatatttcctttcgttttcgtgtgacatgcagcaagggaacatacgtccgtaca
ttagcggtgatgattggcgaacagcttggctttcctgcgcatatgtcgcatttagttcga
accgcatcaggggcgtttacgcttgagcaatgtgttacattttccgaaatagaagagcgc
atcgtccgcggagaaggagaatgtttgctacttccgatcgaaaaggcgctttttcatttg
ccgaaatatcaaatgcatgataaagtagcagagaaagtaaaaaacggtgctattttacct
cttccagcggaattacaatcacttgaaggtcctgtattaatggttaatgaaaaaaataaa
gcggttgccctttactataagcatccggccaaaccgcatttattcaagccattaaaagta
ttttcgtga
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