Anoxybacteroides amylolyticum: GFC30_1995
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Entry
GFC30_1995 CDS
T04397
Name
(GenBank) phoH-like family protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aamy
Anoxybacteroides amylolyticum
Pathway
aamy03420
Nucleotide excision repair
aamy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aamy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GFC30_1995
03430 Mismatch repair
GFC30_1995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aamy03400
]
GFC30_1995
Enzymes [BR:
aamy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GFC30_1995
DNA repair and recombination proteins [BR:
aamy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GFC30_1995
MMR (mismatch excision repair)
Other MMR factors
GFC30_1995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
SLFN-g3_helicase
PhoH
AAA_30
DEAD
NACHT
AAA_16
TMF_DNA_bd
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ANB59898
UniProt:
A0A160F1A5
LinkDB
All DBs
Position
1913937..1916225
Genome browser
AA seq
762 aa
AA seq
DB search
MKERQQEQARLDRVMETITDQIHILEKETIQRREEVIDIRKYFWDDVKVNTDTFDDYLET
IISLRQQAQALSVSQSTHRQAVKKLSTLRRMKEVPYFGRIDFLEEGTFTTEQIYIGISTL
MDGENILIYDWRAPISSVYYDYLLGPAEYMTPEGIVRGLLEKKWQYMIRGGVIESMFDTS
LTIGDDILQQVLGKNTDNYMHNIVASIQQEQNRIIRHDRGKLLIVQGAAGSGKTSAALQR
VAYLLYKYRNMTSDQIILFSPNSMFNHYVSNVLPELGEENMQQVTFQEYVNHRLSNEFQV
EGPYEQMEEMLTASGDEAEIRKASIRFKASAHFFETIKAYSRSLESAGMLFKDVVFRGKP
IITAKQIEEKFYSDTSTGLSHRLEKLAEWLMKQVDEVEKRERTKPWVQEEMELLSNEDCQ
KVYAHLQKRRGFEASFNAYEKALARLVVQRKMRPLRQWIRTFRFVDMKGIYKQLFVQPML
IKQWIEGEVPKEWDDICRLTVNMLEEGKLCYEDATPYLFLRELIHGFQTNLSIKHVFVDE
AQDYSPFQFEFLKHLFPSARMTVLGDFNQAIFPHASDTVDFHTLTNLYGSDQTEIITLTR
SYRSTKPIIEFTRRLVADGERITPFERDGERPVLTLVDNRAELHHSIASKVEDLRKRYNT
IAIICKSAAESTLAYEALIDVEGIKLMKSESTAYEQGVMVIPAYLAKGIEFDAVIIYNAS
AQVYGDECLRRLFYTACTRAMHYLQLYSVGEPSPFLHHAEKS
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaacgtcagcaagagcaagcacgattagatagggttatggagacgattacagat
caaatccatatactcgaaaaagagaccatccaacgccgagaggaagtaatcgatattcgc
aaatatttttgggatgacgtgaaagtaaatacggatacttttgacgattatcttgaaacg
atcatcagcttaaggcaacaggcacaagctttgtctgtcagccaaagcacccataggcaa
gctgtcaaaaaattgtccacgctacgccgtatgaaggaagttccttatttcggccgcatc
gattttctcgaagaaggaactttcaccactgagcaaatatatatcggcatttccacgctc
atggatggggaaaacatcctcatctacgactggcgggcgccgatttcaagtgtctactac
gattatttgcttggtccggctgaatatatgacccctgaagggatcgtgcgtggcttgtta
gagaaaaagtggcaatatatgattcggggcggcgtcatcgaatcaatgttcgatacgagt
ctcaccattggcgacgatattttacaacaagtgcttgggaaaaatacagacaactatatg
cacaacatagtagcctccattcaacaggaacaaaaccgaatcattcggcacgatcgcggg
aaattgcttattgttcaaggagctgctggaagcggaaaaacttcggctgcgttgcaacgg
gtagcttatttgctttataaatatcggaacatgacatccgatcaaattattttattttcg
cctaactcgatgtttaatcactacgtgtccaatgtactgcctgaacttggcgaagagaat
atgcagcaagtcaccttccaagaatatgtaaaccatcggctgagcaacgagtttcaagta
gagggaccttacgagcaaatggaagagatgttgaccgcatccggtgacgaagcagagatt
aggaaagcgagtatccggttcaaggcatcagcacacttttttgaaacgattaaagcatac
agccggtctctagaatcagctggtatgttgtttaaagatgtagtttttagaggaaagccc
ataattactgctaaacaaatcgaggaaaagttttatagcgacacgtcgactggtctttct
cataggctagaaaagttagcggaatggctaatgaaacaagtagatgaagtggagaaaagg
gaacgaacgaagccgtgggtacaagaagagatggagttgcttagcaacgaggattgccaa
aaagtttatgcccacttacaaaaaaggcgcggttttgaagcttcgtttaatgcttatgaa
aaggcgcttgctcgtttggtcgttcaacgaaaaatgaggccgttgcgccaatggattcga
acgtttcgtttcgtcgatatgaaaggaatatacaagcaacttttcgttcagccaatgcta
atcaaacaatggatagaaggggaagtgccgaaagagtgggacgatatttgccgattgact
gtgaatatgttagaggaaggaaaattgtgttatgaagatgcaacgccgtatttatttttg
cgagagcttatccatgggtttcaaacaaatctttccatcaaacacgtgtttgtagatgaa
gcacaagattattctccgtttcaatttgagtttttaaagcatttatttccttctgcgcgg
atgacggtgcttggcgattttaaccaagcgatatttccacatgcaagtgatacggtcgat
tttcatacgcttactaacttatatggatctgatcaaacggagatcatcactttgacccgt
agctaccgttccaccaaacccatcattgaatttacacgccgactcgtggcggacggtgaa
cggattaccccttttgagcgcgatggcgaacgaccggtattgacactagtggataatcgt
gcggaattacaccattcaattgcttcgaaagtggaagatttgcggaaacgatataacacg
attgcgattatatgcaaatccgccgcagaaagtactttagcctacgaagcattgatcgat
gtcgaaggaataaagcttatgaaaagcgaatcgactgcatatgaacaaggggttatggtt
atcccggcgtatttagcgaaagggattgagttcgatgccgttatcatttataacgcctcc
gcgcaagtatatggcgatgaatgcttgcgcagattgttctacaccgcctgcacgcgagca
atgcattacttgcagctttacagtgtaggcgaaccgagtccgtttttgcatcatgctgaa
aagtcttga
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