Anoxybacteroides amylolyticum: GFC30_2448
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Entry
GFC30_2448 CDS
T04397
Name
(GenBank) ATP-dependent DNA helicase, RecQ family protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aamy
Anoxybacteroides amylolyticum
Pathway
aamy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aamy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GFC30_2448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamy03019
]
GFC30_2448
03400 DNA repair and recombination proteins [BR:
aamy03400
]
GFC30_2448
Enzymes [BR:
aamy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GFC30_2448
Messenger RNA biogenesis [BR:
aamy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GFC30_2448
DNA repair and recombination proteins [BR:
aamy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GFC30_2448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
NGO1945_C
DUF6858
Motif
Other DBs
NCBI-ProteinID:
ANB59961
UniProt:
A0A160F281
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All DBs
Position
complement(2356185..2357645)
Genome browser
AA seq
486 aa
AA seq
DB search
MYLEQRLYETFGYRTFRLGQKEIIEDVLAKNDVLAMLPTGGGKSVCYQLPGYMLPGSVLI
VSPLVSLMEDQVQQLKMRGEKRVIALNSFLPDEQKKRALMNLHHFRFIYASPEILQSPLW
QKALRNVAISLFVVDEAHCISQWGHDFRPDFLKLGAIRRELGDPPCLALTATATQEVRSD
IIETLQLTNVRQHLYSVDRPNIAIQVECVDSVEEKVARVLHYAKTLQGPGMIYVSSRQWA
EVLAQKLAAEGIEGVAYYHGGMDSEQRLLVQHQFLCDQLQIVCCTNAFGMGVNKENVRYV
VHFHLPSQLEAYVQEIGRAGRDGKNSLAILLYTHGDEDMVQSLIEAELPTEEQVRLFIAY
RNDVRSMVEINDVQWRLLHYMIEKEQTKAQTVEEIIANIQAAIEARKHWKRSKLTQMRSF
LFRPHCRREQIVAYFQQRLEKKPINCCDRCAFSLDSYQLKQQDESIRMFRGWKEELKRIF
WNEEYT
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
gtgtatcttgaacaacggttatatgaaacgttcggctaccgtacgtttcgcttaggacaa
aaagaaattatcgaagacgtcctcgcgaaaaacgacgtattagcaatgcttccgacaggc
ggagggaagtcggtttgttaccagctgccaggctatatgttgccagggagtgttttaatt
gtgtctcctctcgtttctttaatggaagaccaagtgcagcagctaaaaatgcgcggggaa
aagcgggtgatcgctttaaacagttttttgccggacgaacagaaaaaacgggcacttatg
aatttacatcactttcgctttatttacgcatctccagaaattttgcaatctccactttgg
caaaaggcgttaagaaacgtggcgatttccctatttgttgtcgatgaagcgcattgtatt
tcgcaatgggggcatgatttccgacccgactttcttaaattaggggcgattcgccgcgag
ttaggggatcccccgtgtctagcgctgacggcgacggcaacgcaagaggtgagaagcgac
attatcgaaacactacaattaacaaacgttcgccagcatctttattccgttgaccgaccg
aatattgccattcaagtagaatgtgttgattccgtcgaggaaaaagtagcgcgcgtcttg
cattatgcgaaaacgcttcaaggaccgggcatgatttacgtatcaagcaggcaatgggca
gaagtgctagcgcagaagttagcggcagaagggattgaaggggtcgcgtattatcacggt
ggaatggattcagaacagcgcctgctcgtacaacatcagtttttatgcgatcagttgcag
atcgtttgctgtacgaacgcgtttggcatgggcgtcaataaagaaaacgttcggtacgtt
gttcactttcatttgcctagccaacttgaggcgtacgtgcaagaaatcggacgtgctggc
cgcgatgggaaaaatagcctcgccattttactatatacgcacggcgatgaagacatggta
caatcacttatagaagcagaattgcctaccgaagaacaagttcgcttgtttatagcatac
agaaacgatgtgcgttcgatggtcgaaataaatgacgtacaatggcgtctcttgcactat
atgatagaaaaagaacaaacgaaggcacagacagtcgaagaaatcatcgccaatattcaa
gcggcaatcgaagcgagaaagcattggaagcgaagcaagcttacacaaatgcgttcgttt
ttgtttcgcccgcattgccggagggaacaaattgtcgcatattttcaacagcgattagaa
aagaagccaataaactgttgcgaccgctgcgcattttcgctagacagctaccagcttaag
caacaagatgagtcaatacgaatgtttcgcggctggaaagaagaactaaaacgaatattc
tggaatgaggaatatacatga
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