Anoxybacteroides amylolyticum: GFC30_2478
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Entry
GFC30_2478 CDS
T04397
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase dacB
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
aamy
Anoxybacteroides amylolyticum
Pathway
aamy00550
Peptidoglycan biosynthesis
aamy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aamy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GFC30_2478 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aamy01002
]
GFC30_2478 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
aamy01011
]
GFC30_2478 (dacB)
Enzymes [BR:
aamy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
GFC30_2478 (dacB)
Peptidases and inhibitors [BR:
aamy01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
GFC30_2478 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
aamy01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
GFC30_2478 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
PBP5_C
Motif
Other DBs
NCBI-ProteinID:
ANB61925
UniProt:
A0A160F777
LinkDB
All DBs
Position
complement(2384136..2385275)
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AA seq
379 aa
AA seq
DB search
MRQRKRLLACIVMLAMIFSCIPQRTKAQDVSAQSAILMEQTSGRVLFEKDAHTKRRIASI
TKIMTAILAIESGKLDETVTVSARAVRAEGSSIYLKEGEKIKLRDLVYGLMLRSGNDAAV
AIAEHVGGSMEGFVFLMNQKAAEIGMRDTHFANPHGLDDAENHYSTAYDMALLMRYAMHN
KTFRKISGTKVYRAPNPDENWDRIWRNKNKLLTNLYEYCTGGKTGYTKRAKRTLVTSAEK
DGLELIAVTLNAPDDWNDHISMYEYGFDHYVLAKVSKERIGKRVNDKFYRNHLQASRDLV
YPVKKDEMEKLRVRIHLLRPKKQWKEERALIPIVVGKAVLYLDGQPVDEVPLLYKQSQSK
QTNASIWKLVFFLGVGHDG
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgcggcaaaggaaacggttgcttgcttgcattgtgatgctggcaatgattttttcatgc
attccgcagcggaccaaagcgcaagacgtcagcgcgcaaagcgcgattttaatggaacag
acgtcagggcgagtattgtttgaaaaagacgcccatacgaagcgacgcattgccagcatt
acaaaaattatgacggccattttggcgattgagtcagggaaactagatgaaacagtgacg
gtaagcgcccgcgcggtacgagcggaaggttcttccatatatttgaaagaaggggaaaaa
attaaattacgcgacctcgtctatgggcttatgctccgttcagggaacgatgctgctgtg
gcgattgcggaacatgtcggcggcagtatggaaggctttgtgtttttaatgaaccaaaaa
gcagccgaaatcgggatgcgcgacacgcattttgccaatccacacgggcttgacgatgcg
gaaaatcattattcgaccgcttatgatatggcgctattaatgcgctatgcgatgcataac
aaaacgtttcgaaaaatttccggtacgaaagtatatcgtgctccgaatccggatgaaaat
tgggatcggatctggcgcaataaaaacaaattgttaacgaacttgtacgaatattgtaca
ggcggaaaaacaggctatacgaaacgggccaaacggacgcttgtgacgagtgcagaaaaa
gacggtctagaattaatcgctgtgacactcaacgcccctgatgattggaacgaccatatt
tccatgtacgaatacggatttgaccattatgtgcttgcgaaagtaagtaaagagcgaatc
gggaaacgtgtaaacgacaagttttatcgaaaccatctgcaagcatctcgcgatttagta
tatccagtcaaaaaagacgaaatggaaaaattgcgtgtgcgtattcatcttcttcgtcca
aaaaaacaatggaaagaagagcgagcgcttattccgatcgttgttggaaaagcagtgcta
tatttagatggacaaccggtcgatgaagtaccacttttgtataagcagagccagagcaaa
caaacgaacgcttccatttggaaacttgtgttctttttaggtgttgggcacgatggttaa
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