Anoxybacteroides amylolyticum: GFC30_2709
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Entry
GFC30_2709 CDS
T04397
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
aamy
Anoxybacteroides amylolyticum
Pathway
aamy03030
DNA replication
aamy03430
Mismatch repair
aamy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aamy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GFC30_2709 (holA)
03430 Mismatch repair
GFC30_2709 (holA)
03440 Homologous recombination
GFC30_2709 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aamy03032
]
GFC30_2709 (holA)
03400 DNA repair and recombination proteins [BR:
aamy03400
]
GFC30_2709 (holA)
Enzymes [BR:
aamy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GFC30_2709 (holA)
DNA replication proteins [BR:
aamy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GFC30_2709 (holA)
DNA repair and recombination proteins [BR:
aamy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GFC30_2709 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HP_1247_M
HTH_Tnp_Tc5
SR-25
Motif
Other DBs
NCBI-ProteinID:
ANB59954
UniProt:
A0A167TBV2
LinkDB
All DBs
Position
complement(2586555..2587580)
Genome browser
AA seq
341 aa
AA seq
DB search
MGLDFFKKINGQALVPLYLVYGTETFLVNEAVKRLVNTALTEEERDFHLAVYDCEETPVE
VAVEEAETLPFFGEKKVVVVKNPIFLTAEKGKEKVEHDLKKLEEYIASPSPFSIVVFTGA
YEKLDERKKITKRLMKEAEVFVALPLNEKELYRWVEECAQEHGATITDRAKERVLALAGT
NLTILSNELEKLSLYVGQAGTITEETVEILVSRTLEQNAFVLVEKVVNRKIEEALQVFYD
LLENQEEPIKIVSLLASQFRLLYQVKALATKGYGQQQIASILKVHPFRVKLALGQIALFS
EQELLSIVHDLAEADYQMKSSAMDKQLIIELLLVKWSKKPA
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggggttagatttttttaagaaaatcaatgggcaagcacttgtgccgctttatttagta
tatggaacggaaacatttttagtaaacgaagcggtcaaacggcttgtcaacacagcatta
acggaagaggaacgcgattttcatttagcagtgtatgattgcgaggaaacgccggtggaa
gtagcggtggaagaggcggaaacgttgccgttttttggggagaaaaaagtagttgtcgtg
aaaaaccctatttttttaacggcggaaaaaggaaaagagaaggtggagcacgacctaaaa
aagcttgaggaatacatagcttctccttcccctttttcgattgttgtttttacgggagca
tatgaaaaattagacgagagaaaaaaaataacgaagcgcttaatgaaggaagcggaagta
ttcgtcgcgttgccgctgaatgagaaggaattgtaccgctgggtcgaggagtgtgctcag
gaacatggcgctaccataactgacagggcaaaagaaagagtgttggcattggcagggacg
aatttaacgatactttcgaatgaattagagaagttatcgctatacgtcgggcaagcggga
acgattaccgaggaaacagtggaaatacttgtatcgcgcacgttggagcaaaatgcgttt
gtgcttgtggaaaaagtggtcaatcgtaaaattgaagaggcgttgcaagtgttttatgat
ttattagaaaatcaagaagaaccaattaaaattgtctcgcttcttgcttcccaattccgc
ctcttgtatcaagtaaaagcattggcgacgaaagggtatgggcagcagcaaatcgcttct
attttgaaagtgcatccgttccgagtaaaattagcgctcggacaaatcgccttattttcc
gaacaagaactgttaagcatcgttcacgatttggcggaagcagactatcaaatgaaaagt
agcgcgatggacaaacagctaattatcgagttgttacttgtaaaatggagcaaaaagccg
gcatag
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