Anoxybacteroides amylolyticum: GFC30_3058
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Entry
GFC30_3058 CDS
T04397
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aamy
Anoxybacteroides amylolyticum
Pathway
aamy03030
DNA replication
aamy03430
Mismatch repair
aamy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aamy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GFC30_3058 (dnaE)
03430 Mismatch repair
GFC30_3058 (dnaE)
03440 Homologous recombination
GFC30_3058 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aamy03032
]
GFC30_3058 (dnaE)
03400 DNA repair and recombination proteins [BR:
aamy03400
]
GFC30_3058 (dnaE)
Enzymes [BR:
aamy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GFC30_3058 (dnaE)
DNA replication proteins [BR:
aamy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GFC30_3058 (dnaE)
DNA repair and recombination proteins [BR:
aamy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GFC30_3058 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
CcmE
Motif
Other DBs
NCBI-ProteinID:
ANB62336
UniProt:
A0A160F707
LinkDB
All DBs
Position
pDSM15939_1:complement(86633..89947)
Genome browser
AA seq
1104 aa
AA seq
DB search
MGFVHLHVRSGYSLLNGTAKINDLVKKASDLCFHALALTDENVLYGAIPFYQECKKYGIK
PIIGMIARVKLEKEGYPLVLLAKNDIGYRHLLKISSTIQTKAQDGIPEKWLKHYREGLIA
LTPGNDGQIETLLAQNEWEQAREVANTYKRLFTSDFYIAIQRHGKEETWQRELIRLSKEA
SIPLVATNNVHYLEKEDAFVHECLLAIHRGTKIHGEGNRLESGEYYLKSAEEMDSLFSDI
PEAIINTEKIAAQCHIDIPFGERKLPKYPVPNNENVHDYLRKLCFEGLQKRVPLPTPPYV
ERLEYELAMIKEMNFSDYFLIVWDFMNFARKQGIMTGPGRGSVAGSLVAYTLYITNVDPI
PYGLLFERFLNPARISMPDIDIDFPDDRRDEVIQYVAKKYGNQHVAQIITFGTFGARAAL
RDVAKVMGATAKEIEQLLKYLPNKLGVTLQGAYDEVPAFRKEVHASERMHQLFMTALRLE
GLPRHTSTHAAGVVISERPLSDIVPLQQGHGDIYLTQYSMDVLEQLGLLKMDFLGLRTLT
LIGNIQKLIEQKTKQSVDLTNIPLDDKKTYELLSNGDTSGIFQLESEGIKQVLRQLKPSQ
FEDIVAVNALYRPGPMEFIPVYIRRKHGEEAVTYLHEDLQPILQPTYGVLIYQEQIMQIA
AKMAGFSLGQADLLRRAVGKKKKEILDEERTHFVNGCIECGYSETVAHELYDLIVRFANY
GFNRSHAVAYSLLAYQLAYLKAHYPFYFYVALLTSVIGDEKKLAEYIQEMRKRRIRLLPP
SINGSYYSFAIEDGHIRFSLAGIKHVGAIAVKAIVDERKKRPFSDLFDFCARLSKKAVNR
KTIESLILAGCFDEFGVDRSVLLATLDAALEHAELIGPYIGEDIFAGELSFKPKYVEAPP
LSLEEKLVHEKELLGVYVSPHPISAKIERLQAAGATAIADALKERSDQYVRVGAYVVSER
KTRTKNGEEMAFFTVSDESGEAEVVAFPAVYRRYQSLLKRGEIVLIEGKVEARGGNGKII
MRSVIALSEETLFIKICPHHLPKLASLKQLLQRYRGTVPVVLYYEQERKTVKLSPDYYVN
ASNECIMNLKTLIGEQYVALRRVD
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
ttggggttcgttcaccttcatgtacggagtggatatagtttattaaacgggacagcgaaa
atcaatgatttagtgaaaaaagcaagcgatttatgtttccatgcgctagcattgaccgat
gaaaacgtattgtacggtgcgattccgttttatcaagagtgtaaaaaatatggaattaag
ccgattattggaatgattgctcgtgtgaaattagaaaaagaaggatacccgcttgtgctg
ttagcaaaaaacgacatcggctatcgtcatttactgaaaataagcagcactattcaaacg
aaagcgcaagacgggattcctgaaaaatggctaaagcattaccgggaaggacttattgcg
ctaacgcccggaaacgatggacagattgaaacgttgcttgcccaaaatgaatgggagcaa
gcaagggaagtagcgaatacatataagcgactatttactagcgatttttatatcgccatt
cagcgacatggaaaagaagaaacgtggcagcgcgagctaattcgtttaagcaaagaagca
agcattccactcgttgcaacgaataatgttcattatctcgaaaaagaagacgcgtttgtg
catgagtgccttcttgccattcaccgcgggacaaaaatccatggagaaggaaatcggcta
gaaagtggcgaatactatttaaaatcagcagaggaaatggattctttattttctgatatt
ccagaggcgattatcaatacggaaaaaattgcggcccaatgccatatcgatattccgttt
ggggagaggaagctaccaaaataccctgtacctaacaatgaaaatgtccatgattattta
cggaaactatgtttcgaagggttgcaaaagcgtgttccattgccgacgccaccatatgtc
gaacgactcgaatatgagttagcaatgattaaagaaatgaatttcagcgattatttttta
attgtttgggattttatgaactttgcgcgaaagcaaggaataatgactgggccaggacgc
ggttcggtggccggttcgcttgttgcgtataccctctacatcacaaacgttgaccccatt
ccatatggactactgttcgagcggtttttaaatcccgcacgtatttcgatgccggatatt
gacattgattttcctgacgaccggcgggatgaagtgattcaatacgttgcaaaaaagtat
ggaaaccagcatgttgcacaaattattacatttggcacgtttggtgcgcgagctgcactg
cgagatgtggcaaaagtgatgggggcgacggctaaagaaatcgaacagctactaaagtat
cttccgaacaaattaggggtgacgctacaaggagcgtatgacgaagtgcctgcatttcgg
aaagaagtacacgcttcggaacgaatgcaccagctctttatgacggcgttgcgtcttgag
ggacttccgcgccatacgtcaacccatgcagcaggggtagtgattagcgagcggcccctt
tcggacatcgttccgttgcagcaagggcacggggacatttatttaacacaatactcgatg
gatgtattagaacagcttggcttattaaaaatggattttcttggtctccgcacactaacg
ttgattggcaacattcagaaattgattgagcaaaaaacaaaacaatcggtcgatttaacc
aatatcccattagatgacaaaaaaacgtatgagctgttaagtaatggggatacgagcggc
atttttcaactcgaatcagaagggataaagcaagtgcttcggcagctgaaaccgtcccaa
tttgaagacattgtcgcggttaatgcgctttaccggccaggaccgatggaatttattccg
gtatacattcgccgcaaacatggcgaagaagcggtgacgtacttgcatgaagaccttcaa
ccaattttacagccaacttatggggtgcttatttatcaagagcaaattatgcaaatcgca
gcaaaaatggcaggtttttcgttaggacaagcggatttattgcggcgggcggttgggaag
aagaaaaaagaaattcttgacgaagaacgaacccattttgttaatggctgcatcgagtgt
gggtatagcgaaacggttgctcatgaactatacgatttgattgttcgttttgctaactac
ggatttaaccgaagccatgcagtcgcttatagtttgcttgcctatcaattggcgtatttg
aaagcgcactatccgttttatttttacgtggcactattaacgagcgttattggggatgaa
aaaaaactagcggagtatattcaggagatgcgcaaaagacgtatccgcctgctcccgcct
tctattaatggaagctactattcttttgccatcgaggacggacatatccgctttagcctt
gctggtataaaacatgtcggtgcgatagcagtaaaagcgattgtcgacgaacggaaaaag
cgtccattttccgatttattcgatttttgtgcccgattgtctaaaaaagcagtcaaccgc
aaaacgattgaatcgctgattttagcggggtgttttgatgaatttggcgttgatcggtca
gtgttgcttgcaacgttagacgcagcgctcgaacacgcagaattaataggaccgtatatt
ggtgaagacatattcgcgggcgaattgtcgtttaaaccgaagtatgtggaagccccaccg
ttgtcgttggaggaaaaacttgtgcacgaaaaagaactgttaggggtgtatgtttctccg
caccctatttccgctaaaatagagcgtttgcaggcagcgggagcgacggcgattgctgac
gcgctaaaagaacgaagcgatcaatacgttcgcgtcggggcttacgtggtaagtgaacga
aaaacaaggacaaaaaacggagaagaaatggcgttttttaccgttagtgatgagagcgga
gaagcagaggtggtcgcatttccagcggtatatcgccgctatcaatcgttgttaaaacga
ggagaaatcgtgctgattgaagggaaagtcgaagcacgcggcggaaacggaaaaattatc
atgagaagtgttatcgcacttagcgaagaaacgctttttattaaaatttgccctcatcat
cttcctaagctggcatcattgaagcaactcttgcagcgatatcgtggaaccgttccagtt
gtgctttattacgagcaagagcgaaaaacggtaaagctatcgccggattattacgtgaac
gcttcaaatgaatgtataatgaatctgaaaacattgattggcgagcaatatgtcgccctc
agacgtgttgattaa
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integrated database retrieval system
