Anoxybacteroides amylolyticum: GFC30_345
Help
Entry
GFC30_345 CDS
T04397
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
aamy
Anoxybacteroides amylolyticum
Pathway
aamy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aamy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GFC30_345 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aamy03021
]
GFC30_345 (rho)
03019 Messenger RNA biogenesis [BR:
aamy03019
]
GFC30_345 (rho)
Transcription machinery [BR:
aamy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
GFC30_345 (rho)
Messenger RNA biogenesis [BR:
aamy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GFC30_345 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
OB_RNB
ATPase_2
AAA_22
AAA
AAA_25
NACHT
Motif
Other DBs
NCBI-ProteinID:
ANB61473
UniProt:
A0A160F6J2
LinkDB
All DBs
Position
338148..339419
Genome browser
AA seq
423 aa
AA seq
DB search
MELTISVLENMKLKELYELARQYKISYYSKLTKKELIFAILKARAEQDGLMFMEGVLEII
QSEGFGFLRPINYSPSTEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYYGLLHVEAV
NGEDPEIAKERVHFPALTPLYPSRQMKLETTPDKLSTRIIDLIAPVGFGQRGLIVAPPKA
GKTMLLKEIANSITTNHPDVELIVLLIDERPEEVTDIERSVNGDVVSSTFDEVPENHIKV
AELVLERAMRLVEHKRDVVILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFFG
AARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRSLAERRIFPAIDIRR
SGTRKEELLIPREHLEKLWAIRKTMSDTPDFIDRFLNKLRQTKSNEEFFAMLDEEWKSMG
NRK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggaattaacgatttccgtattagaaaatatgaaactaaaagagttgtacgagcttgct
cggcaatataaaatttcgtattacagcaaactaacgaaaaaagagcttattttcgcgatt
ttaaaagcacgggcagaacaagatggactcatgtttatggaaggcgtcctcgaaattatc
caatcggaagggttcggttttttacgtccaattaactactcgccaagcacggaagatatt
tatatttccgcttcccaaattcgccgctttgatttgcgcaacggcgataaagtatcggga
aaagtgcgtcctccgaaagaaaacgagcgttattatggcttattgcacgtggaagcagtg
aacggagaagacccggaaattgcgaaagaacgtgtgcatttcccagcgttgaccccgctt
tatccgagccggcaaatgaagctagaaacgacaccggataaattatcgacgcgcattatt
gatttaattgccccagttgggtttgggcagcgcggcttaattgtcgcaccgccaaaagcg
ggaaagacgatgctgttaaaagaaattgccaatagcattacgacgaaccatccagatgta
gaacttattgtgctattaattgacgaacgtccggaggaagtgacggatattgaacgttcc
gtcaacggtgatgtcgtcagctctacgtttgacgaagtgccggaaaaccatattaaagtg
gcggagcttgtgttagagcgggcgatgcgccttgtggagcataagcgcgatgtcgttatt
ttaatggacagcattacgcgcttagcgcgtgcatataacttagtcattccaccgagcggc
cgtactctttccggagggattgacccagctgcgtttcaccgtccgaaacggtttttcggt
gctgcgcgcaatattgaagaaggcggcagcttaacgattttagcgaccgcgcttgtcgat
acaggctcgcgtatggacgatgtcatttacgaggaatttaaaggaacgggcaacatggag
ttgcacctcgaccgttcgctcgcggaacggcgcattttcccagccatcgatattcgccgc
tctggtacacgtaaagaagagttgcttattccccgtgaacatttggaaaaattatgggcg
attcgcaaaacgatgtctgataccccagactttatcgaccgctttttaaacaaactgcgc
caaacaaaatcaaacgaagaattttttgcgatgttggatgaggaatggaaaagtatgggg
aatagaaaataa
DBGET
integrated database retrieval system
