Anoxybacteroides amylolyticum: GFC30_776
Help
Entry
GFC30_776 CDS
T04397
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
aamy
Anoxybacteroides amylolyticum
Brite
KEGG Orthology (KO) [BR:
aamy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aamy03009
]
GFC30_776 (rumA)
Enzymes [BR:
aamy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
GFC30_776 (rumA)
Ribosome biogenesis [BR:
aamy03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GFC30_776 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
Methyltransf_15
TRM5-TYW2_MTfase
MTS
Cons_hypoth95
PrmA
Methyltransf_11
RrnaAD
Methyltransf_12
PCMT
TRM
N6_Mtase
UPF0020
N6_N4_Mtase
Ubie_methyltran
Methyltransf_4
Methyltransf_23
BORCS6
Motif
Other DBs
NCBI-ProteinID:
ANB60332
UniProt:
A0A160F3E2
LinkDB
All DBs
Position
753490..754869
Genome browser
AA seq
459 aa
AA seq
DB search
MAKVEAPVAKNEYYDVIFEDLTHDGAGVAKIDGFPIFVANGLPGEKAKIKVIKVKKGYGY
GRLIELYEPSPDRVDAPCPIYKQCGGCQLQHLSYEGQLKAKYKHVKEVLARIGKIEDVAV
HPVLGMSDPWRYRNKAQVPVGEREGGLVAGFYKERSHDIIDMDACLIQQEMNDIVVQTVK
QICEQYNIPAYNEQTHKGVLRHIMARYGATTKEVMVVLITRTEELPHKKKIIEAIIDRIP
NVKSIVQNINPKRTNVIMGEDTRVLWGSEHIYDYIGDIRFAISARSFYQVNPEQTKVLYE
KALEYAELTGEETVIDAYCGIGTISLFLAKKAKKVYGVEVVPEAIEDAKRNAALNGITNV
EFAVGEAEAVIPRWYEQGVKADCIVVDPPRKGCDETLLQTMIAMKPKRIVYVSCNPSTLA
RDLRILEDDGYKTLEVQPVDMFPHTVHVECVVLMSRVEK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagtagaagctccagttgcaaaaaacgaatactatgatgtcatttttgaagat
ttgacgcacgatggcgccggcgtggcaaaaattgacggttttccgattttcgtggcgaac
gggctaccgggggaaaaagcaaaaattaaagtcattaaagtgaaaaaaggctatggctat
gggcgtttaattgagctatatgaaccgagcccggatcgcgtcgacgctccgtgtccgatt
tacaagcaatgcggaggctgccaactgcaacatttaagctatgaagggcagctaaaggcg
aagtataaacatgtaaaagaagtgcttgcgcgcatcggaaagattgaagatgtcgctgtt
catcctgtcctcggcatgagtgatccgtggcggtaccgcaataaagcgcaagttcctgtt
ggtgagcgtgaagggggactcgttgccggtttttacaaagagcgcagccatgacattatc
gatatggacgcgtgtttgatccaacaggaaatgaacgatatcgtcgttcaaacggtgaag
cagatttgcgagcaatataacatcccagcctacaacgaacaaacgcataaaggtgtcctt
cgccacattatggctcgctatggggcaacgacgaaagaggtaatggtcgttttgattaca
cgcacggaagagttgccgcataaaaagaaaattattgaggcgattattgatcgcatccca
aatgtaaaatcgattgtgcaaaatattaacccgaagcgaacaaatgtcattatgggggaa
gatacgcgcgttctttggggttcggaacacatttacgattatatcggtgacattcgtttt
gctatttctgctcgttcgttttatcaagtgaaccctgaacaaacgaaagtgttgtatgaa
aaagcgcttgaatatgccgaattgacaggagaggaaacggtcattgacgcctattgcggc
atcgggacgatttcgctctttttagcgaaaaaagcaaagaaagtgtatggagtcgaagtt
gttccggaggcgattgaggatgcaaagcgaaatgcagcgctaaacggcattacaaacgtc
gaatttgccgttggcgaagcggaagcggtcattccgagatggtatgaacaaggggtgaaa
gccgattgcatcgtcgtcgacccgccgcgcaaaggctgtgacgaaacgctattacagacg
atgatcgccatgaaaccgaagcgcatcgtctatgtttcatgcaacccatccaccctcgcc
cgcgatttgcgtatcctcgaagacgatggatacaaaacacttgaagtccagccggtcgac
atgttcccacacaccgtgcatgtggagtgcgtagtattgatgtcaagggtggagaaatga
DBGET
integrated database retrieval system
