Aggregatibacter actinomycetemcomitans D7S-1: D7S_00059
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Entry
D7S_00059 CDS
T02046
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aan
Aggregatibacter actinomycetemcomitans D7S-1
Brite
KEGG Orthology (KO) [BR:
aan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aan03032
]
D7S_00059
03400 DNA repair and recombination proteins [BR:
aan03400
]
D7S_00059
Enzymes [BR:
aan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
D7S_00059
DNA replication proteins [BR:
aan03032
]
Prokaryotic type
DNA Topoisomerases
D7S_00059
DNA repair and recombination proteins [BR:
aan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D7S_00059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
DUF4795
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AFI85942
LinkDB
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Position
61595..64201
Genome browser
AA seq
868 aa
AA seq
DB search
MSKSLVIVESPAKAKTINKYLGNNYVVKSSVGHIRDLPTVGSSTGEKAKAISTKGLSAEE
KQAIKHKKEQEALVKRMGIDPYHSWKANYQILPGKEKVVAELKSLAKKVDHIYLATDLDR
EGEAIAWHLREVIGGDDERYSRVVFNEITKNAIKQAFEHPEHLNMDRVNAQQTRRFLDRV
VGFMVSPLLWKKVARGLSAGRVQSVAVKLIVEREREIKAFVPQEYWEVSVLTNTPKGDEI
RLDVAQFKGKKFEPKNAEQAQSAVDFLSKSDYVISDLETKPTSSRPRAPFITSTLQQTAS
TRLGFGVKKTMMLAQRLYEAGYITYMRTDSTNLSQDALNMVRGYIEKQYGQTYLPAKPNF
YSSKENAQEAHEAIRPSDINVGLDDLAGMEKDAVRLYDLIWRQFVACQMPAAQYDSTTLT
VTAGDYSLTAKGRILRFDGWTKVLPQQSKSAEDQALPAVSVNDKLNLSEVQPQQYFTKPP
ARFSEAALVKELEKRGIGRPSTYAAIISTIQERGYVRTENRRFYAEKMGEIVTDRLNQSF
ADLMNYDFTANMEDVLDQIASGDKNWKTELNQFFKDFSTQLTKAELDELEGGMRPNNLVE
TDICCPTCGRNMAIRTASTGVFLGCTGYALPPKARCKTTINLIPEAELLNVLDDASETKA
LMERKRCPKCGTAMDSYIIDPHRKLHICGNNPNCDGYLVEEGKFKIKGYDGPIVECDKCG
GDMHLKLGRFGKYMACTQCDNTRKILKNGEVAPPKEEPIHFPELKCEKSDAYFVLRDGAG
GVFMSAHNFPKSRETRAPKVAELALYRNRLPEKFSYLADAPQTDPEGSEAIIRFSRKEKR
QYVTSEKNGKATKWIVDFVDGKWVERKK
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatccttagttattgtggagtcgccggcaaaggcgaaaaccattaataaatat
ttaggaaacaattatgtagtgaaatccagcgtggggcatattcgcgatttgccaactgtg
ggttcctccaccggagaaaaagccaaagccatttccaccaaagggctcagtgcggaagaa
aaacaggcgataaaacacaaaaaagaacaggaagctttagtcaaacgcatgggcattgac
ccttatcacagttggaaagccaactatcagattctccccggcaaagaaaaagtggttgcc
gaactgaaatctctcgcaaaaaaagttgatcatatttacctcgccaccgatttggataga
gaaggagaggcgattgcctggcatttgcgtgaagtcatcggcggcgatgatgaacgttat
agccgcgtggtgtttaatgaaattaccaaaaacgccattaaacaagcctttgaacacccc
gaacatttgaatatggatcgcgttaacgcacagcaaacccgccgctttttggaccgcgtg
gtaggctttatggtctcaccgttactttggaaaaaagtggcgcgcggtttatctgccggt
cgtgtgcaatcggtggcggtgaagttaatcgttgagcgtgaacgtgaaattaaggctttc
gtgccacaggaatattgggaagtctccgtgctcaccaatacaccgaaaggcgatgaaatt
cgcttggatgtggctcaatttaaaggcaaaaaatttgaaccgaaaaatgccgagcaggcg
caaagtgcggtggattttttaagtaaatccgactatgtgatttccgatttggaaaccaag
ccgaccagttcccgcccaagagcgccgtttattacctcaactttacaacaaaccgctagc
acccgtttaggcttcggtgtgaaaaaaaccatgatgttagcgcaacgtttgtatgaagcc
ggttacatcacttatatgcgtaccgactccaccaatttaagccaggatgcgctgaatatg
gtacgcggctacattgaaaaacagtacggtcaaacctatttgccggcaaaaccgaatttt
tattccagcaaagaaaatgcgcaggaagcccatgaagctattcgtccgtccgatatcaat
gtgggcttggatgacttagcgggcatggaaaaagacgcggtgcgtttatatgatttaatc
tggcgtcaatttgtggcatgtcaaatgcctgcggcacaatatgacagcacaacattaacc
gtaacagcgggggattacagtttaaccgcgaaagggcgtattttacgttttgacggttgg
accaaagtgttaccgcaacaaagtaaatccgcagaagatcaggcgttaccggcggtttcc
gttaacgataaacttaacttgtcggaagtacaaccgcagcaatatttcaccaaaccgccg
gcacgtttctctgaagcagcgttggtaaaagaattggaaaaacgtggtatcggccgtcct
tccacgtatgcggcaattatctctacgattcaggaacgcggttatgtacgcaccgaaaat
cgtcgtttctatgcggagaaaatgggggaaatcgtaacggatcggttgaatcagtctttc
gccgatttaatgaactacgatttcaccgctaatatggaagacgtgctggaccaaattgct
tccggggataaaaactggaaaaccgaattaaaccaattcttcaaagatttctcgacccaa
ttgaccaaagcggaattagatgaattggagggcggtatgcgcccgaataatttggttgag
acggatatttgttgcccgacttgcggtcgcaatatggcgatcagaaccgccagtacaggc
gtattcttaggctgcaccggctatgccttaccaccgaaagcacgttgcaaaaccaccatt
aacctgattcctgaagcggaactattaaatgtgttggacgacgcgtcggaaaccaaagcg
ctaatggaacgtaaacgctgcccgaaatgcggtacggcgatggatagttatattatcgac
ccacatcgtaaattgcatatttgcggcaataacccgaattgcgacggctatttagtcgaa
gaaggtaagtttaagattaaaggttatgacggcccaatcgttgaatgcgataaatgcggc
ggtgatatgcaccttaaactggggcgcttcggtaagtatatggcgtgtacacaatgcgat
aatacgcgcaaaattctgaaaaacggcgaagtggcgccaccgaaagaagaaccgattcat
ttcccggaattaaaatgcgaaaaatccgatgcttatttcgtcttgcgcgacggtgcgggc
ggggtgtttatgtccgcgcataatttcccgaaatcccgtgaaacccgtgcacctaaagtg
gcggaattggcgttgtaccgtaatcggttgccggaaaaatttagctatctggctgacgca
ccacaaacggatccggaaggcagtgaagctatcattcgctttagtcgtaaagaaaaacgt
caatatgtcacctccgaaaagaatggcaaggcgacaaaatggatagtggattttgttgat
gggaagtgggtagagcgaaagaaataa
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