Aggregatibacter actinomycetemcomitans D7S-1: D7S_00066
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Entry
D7S_00066 CDS
T02046
Symbol
sbcB
Name
(GenBank) exonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
aan
Aggregatibacter actinomycetemcomitans D7S-1
Pathway
aan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
D7S_00066 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aan03400
]
D7S_00066 (sbcB)
Enzymes [BR:
aan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
D7S_00066 (sbcB)
DNA repair and recombination proteins [BR:
aan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
D7S_00066 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D7S_00066 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D7S_00066 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Csf1_mid_RBG
Chromo_2
ECT2_BRCT0
Motif
Other DBs
NCBI-ProteinID:
AFI85949
LinkDB
All DBs
Position
complement(69312..70739)
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AA seq
475 aa
AA seq
DB search
MMAKNDFSFFIYDYESFGVNPAKDRPAQFGGIRTDADFNIIGEPIVLYCKQTNDYLPAPE
AVLVTGITPQECNEKGLSEPEFAAKILQEFSRPNTCVMGFNNIRYDDEMTRYTFYRNFID
PYEYSWKNGNSRWDLLDLVRACYALRPDGIEWPLDDEGMPSFRLEKLTEANGIAHDNAHD
AMSDVYATIEMAKLIKQKQPKLFQYFFENRGKKEVEKLIDTAEMTPLVHVSGMLGNYRGN
TTLIASLAWHPTNKNAVIVCDLTANIDDLLTKSVEELRENLYTKKETLLAAGALPVPLKL
IHINKCPIVAPAKTLLPQNAERLGIDQELCAKNRQRLQEARDIRQKVMDIFHQEREFDAS
DNVETKLYNGFFSDADKNNMAILRSLEPEKLAKHNLSFQDPRIPELLFHYRARHFYRTLN
RAEQIKWQKYCRKKLDAEALQFEQRLQELAEQYSNNEENLMLLQKVYEYGAQIIG
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaaaaaacgactttagtttttttatttatgattacgaaagctttggggttaat
cccgcaaaggatcgcccggcacaattcggtggcattcgtaccgacgcagattttaatatt
atcggtgagccgattgtcctttattgcaagcaaactaacgattatttgccggcaccggaa
gcggttttagtcaccggaattacaccacaggaatgcaacgaaaaagggctgtcggaaccc
gaatttgccgccaaaattttacaggaattcagccgtccgaatacttgcgtgatgggcttt
aataacattcgttatgacgatgaaatgacccgttatacgttttaccgtaattttatcgat
ccttatgaatacagctggaaaaacggcaattcccgttgggatttgctggatttggtgcgt
gcttgctatgcgttgcgtccggacggtattgaatggcctttagatgatgaaggtatgccg
agtttccgcctggaaaaactgacagaggccaatggaatagcgcacgataatgcgcatgat
gccatgtcagatgtgtatgccactattgaaatggcaaagctcatcaagcagaaacagcct
aaattattccaatatttctttgaaaatcggggtaaaaaagaggttgaaaagctcatcgat
actgcagaaatgacaccattggtacatgtatcgggaatgttggggaattatcgcggaaat
accacgttaattgcatctttagcctggcatccgacgaataaaaatgccgttattgtgtgt
gatttaactgccaatattgatgatttattaacaaaatcggtagaggagttgcgtgaaaat
ctttacaccaaaaaagagaccttattggctgccggtgcattgccagtgccattgaagctc
attcatatcaataaatgtccgattgttgcaccggctaaaactttattgccgcaaaacgcc
gaacgtctaggcattgatcaggaattatgcgcaaaaaatcgacaacgtttgcaggaagca
agagatattcgccaaaaagtaatggatatttttcatcaggaacgtgaatttgacgcttcc
gataatgttgaaaccaaactgtataacggcttttttagtgacgccgataaaaacaatatg
gcgattttacgcagtttggaacccgaaaaattggctaaacataatcttagttttcaagat
ccacgaattcctgaattactgttccattatcgtgccagacatttctatcgtacattgaac
cgtgcggaacaaattaaatggcaaaaatactgccgtaaaaaattagatgccgaggctttg
caatttgaacaacgtcttcaagaattagccgaacaatattccaacaatgaagaaaatctt
atgttattgcaaaaggtctatgaatatggagcccaaataatcggttaa
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