Aggregatibacter actinomycetemcomitans D7S-1: D7S_00349
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Entry
D7S_00349 CDS
T02046
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aan
Aggregatibacter actinomycetemcomitans D7S-1
Brite
KEGG Orthology (KO) [BR:
aan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aan03016
]
D7S_00349
Enzymes [BR:
aan01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
D7S_00349
Transfer RNA biogenesis [BR:
aan03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
D7S_00349
Prokaryotic type
D7S_00349
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Nrd1-Seb1_dom2
Motif
Other DBs
NCBI-ProteinID:
AFI86210
LinkDB
All DBs
Position
complement(355127..356047)
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AA seq
306 aa
AA seq
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MSKPRKRGRDIHGVFLLDKPQGMSSNDIMQKVKRIFHANKAGHTGALDPLATGMLPICLG
EATKFSQFLLDADKRYLVTAKLGERTDTSDAEGQVVETRPINVKTPEILTALEAFRGDIL
QVPTMFSALKHNGKPLYEYARAGITVEREARPITIFELNFIEYNAPYLTLEVHCSKGTYI
RTLVDDLGEVLGCGAHVTMLRRTAVADYPTEKMMSWDDLQALAEQQQDLAVLDALLLPMD
TAIAKLSALILDESQTQGIGFGQRIKFDNPSKRQGQVRLFSHENRFLGVAVIDENNVIRP
QRLVVY
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccgcgtaaacgtgggcgtgatattcacggcgtgtttttgctggataaaccg
caaggaatgtcttccaacgacatcatgcaaaaagtgaaacgcatttttcatgcgaacaaa
gcggggcatacgggtgcattggatccgttagccacgggaatgttgcctatctgcttgggc
gaagccaccaagttttcccagtttttgttggacgccgataaacgttatttggtcacggcg
aaactaggcgagcgcaccgatacctccgatgcggaaggacaggtggtggaaacccgcccc
attaacgtaaaaacacctgaaattttgaccgcacttgaggcttttcgtggtgatattttg
caagtacccaccatgttttccgccttgaagcataacggtaagcccctttatgaatatgcc
cgtgccggtattacggtggaacgggaagcgcgccccattacgatctttgaattgaacttt
attgaatacaacgcgccttatttaaccctagaagtgcattgctccaaaggcacttacatt
cgtaccttggtggatgatttaggcgaagtccttggctgtggcgcgcacgtcaccatgcta
cgtcgcacggcagtggcggattacccgacggaaaaaatgatgagttgggacgacttacaa
gccttggcggaacaacaacaagatttagcggtgttggatgcacttttgttaccgatggat
accgccatagcgaaactctcggcgttaatcttggatgaaagccaaacccaaggtatcgga
ttcggtcagcgtataaaattcgataacccgtcaaaacgacaaggtcaagtgcggttattt
tcccatgagaatcgctttctcggcgttgcggtgattgatgagaataatgtgattcgacca
cagcgattggtggtgtattga
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