Aggregatibacter actinomycetemcomitans D7S-1: D7S_00882
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Entry
D7S_00882 CDS
T02046
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
aan
Aggregatibacter actinomycetemcomitans D7S-1
Brite
KEGG Orthology (KO) [BR:
aan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aan03032
]
D7S_00882 (gyrB)
03400 DNA repair and recombination proteins [BR:
aan03400
]
D7S_00882 (gyrB)
Enzymes [BR:
aan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
D7S_00882 (gyrB)
DNA replication proteins [BR:
aan03032
]
Prokaryotic type
DNA Topoisomerases
D7S_00882 (gyrB)
DNA repair and recombination proteins [BR:
aan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D7S_00882 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AFI86678
LinkDB
All DBs
Position
complement(837907..840327)
Genome browser
AA seq
806 aa
AA seq
DB search
MSTNTPETYGANSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGYC
DDIVVTIHSDNSVSVQDDGRGIPVDIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLH
GVGVSVVNALSDKLQLTIRRQGKVHEQFYSLGDPQAPLVVIGETTQTGTTVRFWPSPTIF
TNIEFEYDILAKRLRELSFLNSGVSIRLIDERTDKQDHFHYEGGIQAFVEYINRGKTPIH
PKSFYFSAEKDGIGVEIALQWNDGYAENIYCFTNNIPQRDGGTHLAGFRGAMTRTLNNYM
ENEGYTKKSKVATSGDDAREGLVAVISVKVPDPKFSSQTKDKLVSSEVKSAVESLMNEYL
QTYLLENPNDVKIIVTKIIDAARAREAARKAREMTRRKGALDLGGLPGKLADCQERDPAL
SELYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSAEVGTLITALGCG
IGRDEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGYVYIAQPPLYKV
KKGKQEQYIKDDEAMAEFELAIALENAALYVNESAPGMQGVALQNLASEYLAVQKMIARL
TRYYPESVLKELIYQPALTTALMQQESAVNSWADSLVATLNMKETDGRHYSYRLQFNAER
NLYEVVLTVRTHGIDTDYFLNFQFATGSEYTRLIALGEKLVGLLEDSAYVMRGERKVAVG
SFEQAIEWLMKESRRGLMIQRYKGLGEMNPEQLWETTMDPNIRRMLKVSIKDAVAADQLF
TTLMGDEVEPRRDFIESNALRANLDI
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaaatactcctgaaacttatggtgcaaacagtattaaagtgctgaaagggctt
gatgcagtgcggaaacgtcccggaatgtatatcggtgacacagacgatggaacgggttta
caccatatggtttttgaagtggtggataacgccattgatgaagccttggcagggtattgc
gacgacatcgtagtcactattcattccgacaattccgtttccgtgcaagatgatgggcgc
ggtattccggtagatattcacccggaagaaggcgtttccgctgccgaagtgatcatgact
gtgttacacgccggaggtaaatttgacgataactcctataaagtatccggcggtttgcac
ggcgtgggggtatccgtggtaaacgcgctgtccgacaagttacagctcaccattcgccgt
caaggcaaggtgcatgagcaattttacagcctcggcgatccgcaagcgccgttagtcgtc
atcggcgaaaccacgcaaaccggtaccaccgtgcgtttctggccaagcccgactatcttc
accaacattgaatttgaatacgatattttagccaagcgcttaagagagttgtctttttta
aattccggcgtgtccattcgtttaattgacgaacgtaccgacaaacaagaccacttccat
tacgaaggcggtattcaggcgttcgttgaatatatcaaccgcggtaaaaccccgattcat
ccgaaatctttctatttttccgctgaaaaagatggcattggtgtagaaattgcgttgcaa
tggaacgacggttacgcggagaacatttattgtttcaccaacaacattccgcaacgggac
ggcggtacgcacttagccggtttccgtggcgcaatgacccgcaccttgaacaactacatg
gaaaacgaaggctacaccaagaaatccaaagtggcgacttccggcgatgacgcccgtgaa
ggcttggtggcggtgatttccgtgaaagtaccggatccgaaattctcttctcaaacaaaa
gacaaactggtttcctccgaagtgaaaagtgcggtggaatccctgatgaacgaatattta
caaacctatttgttggaaaacccgaacgatgtaaaaatcatcgtgaccaaaattattgat
gccgcgcgtgcccgtgaagccgcccgcaaagcccgcgaaatgacccgtcgtaaaggcgcg
ttggatttaggcggtttaccaggtaaattagcggattgtcaggaacgcgatccggcgttg
tccgaactttacatcgtagagggggactctgcgggcggttccgcaaaacaagggcgtaac
cgtaaaaaccaagcgattttgccgttaaaagggaaaatcctgaacgtggaaaaagcccgt
ttcgacaaaatgttgtcttctgcggaagtgggcacattaattaccgcgttgggttgcggt
atcggtcgtgacgaatataatcccgacaaattacgctatcacagcatcatcatcatgacc
gatgcggacgtggacggttcgcacattcgtactttgttgttgacgttcttctatcgccaa
atgccggaactgattgagcgtggctatgtttatattgcccagccgccgctctataaagtg
aaaaaaggcaaacaggaacaatacattaaagatgacgaagcgatggcggaatttgaactg
gcgattgcgttggaaaatgctgcgctttatgtgaatgaaagtgcaccgggtatgcaaggc
gtggcgttgcaaaacttggcgtccgaatatcttgccgtacaaaaaatgattgcccgctta
acccgctattatccggaaagcgtgttaaaagaattgatttatcaaccggcgttgaccact
gcactgatgcagcaggaaagtgcggtcaattcctgggccgattctttggttgccacctta
aatatgaaagaaaccgacggcagacattatagctatcgtctgcaatttaacgccgaacgg
aatttgtatgaagtggtattaacggtgagaacgcacggtattgatacggattatttcctc
aatttccaattcgccaccggtagcgaatatacccgcctaatcgccctcggcgaaaaatta
gttggcttgttggaagacagcgcctatgtgatgcgtggtgagcgcaaagtggcggtgggc
tcttttgaacaagccattgaatggttaatgaaagaatcccgtcgcggcttaatgatccaa
cgttataaaggcttgggcgagatgaatcctgagcaactttgggaaaccaccatggatccg
aatatccgccgtatgttgaaagtatcgattaaagatgccgtggcggcagatcaacttttc
accaccttaatgggtgacgaagtggaaccgcgtcgcgatttcatcgaaagcaatgcgtta
agagcaaatctggatatttaa
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