Aggregatibacter actinomycetemcomitans D7S-1: D7S_01081
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Entry
D7S_01081 CDS
T02046
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
aan
Aggregatibacter actinomycetemcomitans D7S-1
Pathway
aan03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D7S_01081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aan03400
]
D7S_01081
Enzymes [BR:
aan01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
D7S_01081
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
D7S_01081
DNA repair and recombination proteins [BR:
aan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
D7S_01081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_IS1595
NFACT_N
Zn_ribbon_6
Zn_ribbon_8
Zn_ribbon_TiaS
DZR
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
AFI86868
LinkDB
All DBs
Position
complement(1032087..1032902)
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AA seq
271 aa
AA seq
DB search
MPELPEVETAVRGVSPYLKDYVIEKIVVRQPKLRWAVSPELAELHHVKILDLTRRAKYLV
IHTEQGYIIGHLGMSGTVRIVSHGSPIDKHDHFDIVMNNGKLLRYNDPRRFGAWLWTEKL
DEFHLFLKLGPEPLSEEFNAEYLFKKLYKKTTALKTVLMDNTVVVGIGNIYANESLFLCG
LHPLKLAANLTRKQCERLVDTIKSVLAKAIEQGGTTLKDFLQPDGRPGYFAQELLVYGNK
GKPCPKCGTKIESLVIGQRNSFYCPTCQKKG
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgcctgaagtggaaaccgccgtacgcggtgtgagtccttatctgaaagat
tatgttattgaaaaaattgtagtccgccagccgaaactgcgctgggctgtatcgcctgaa
ttggcagagttgcatcatgtaaaaattttggatttaacccgtcgcgccaaatatctggtt
attcacaccgaacagggttacatcatcggacatttggggatgtcgggaacggtgcgtatt
gtgtctcatggcagcccgattgataaacacgatcattttgatattgtgatgaataacggc
aaattactgcgttataacgatccccgccgtttcggtgcctggctctggacggaaaaattg
gatgaattccatttattcttaaaactgggacccgaaccgctatcagaggaattcaatgca
gagtacttgtttaaaaaattatacaaaaaaacaaccgcacttaaaaccgtattaatggat
aacaccgtggtggttggtattggcaacatttatgccaatgaaagtctatttctgtgcggg
ttacatcctttgaagctcgccgctaatctaactcgaaaacaatgcgaacgcttggtggat
accatcaaatcggtgcttgccaaagccattgaacaaggcggcaccacgctaaaagatttt
ctccagcccgacggcagaccgggttattttgcacaagaattactagtttacggcaacaaa
ggcaaaccctgtccaaagtgcggtacaaaaatcgagagtttagtcatcgggcaacggaat
agtttttattgcccgacgtgccagaagaagggataa
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