Aggregatibacter actinomycetemcomitans D7S-1: D7S_01191
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Entry
D7S_01191 CDS
T02046
Name
(GenBank) RNA helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
aan
Aggregatibacter actinomycetemcomitans D7S-1
Pathway
aan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D7S_01191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aan03019
]
D7S_01191
Enzymes [BR:
aan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
D7S_01191
Messenger RNA biogenesis [BR:
aan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D7S_01191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AFI86967
LinkDB
All DBs
Position
1121377..1122633
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AA seq
418 aa
AA seq
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MQQNYLSSARFADLALHPLVLQALNDKGFDFCTPIQALSLPITLRDKDVAGQAQTGTGKT
IAFLTALFHHLLTYPKQTEVNQPRALILAPTRELAVQIEHDAQIFLKTTKFKTALAYGGD
GYDKQLKAIENGVDVLIGTTGRVIDYVRQGVIRLDQIQTVVLDEADRMFDLGFIRDIRYL
LRKCPPPQQRLTMLFSATLSYKVRELAFEDMNSPEYVEIEPEQKTGQQIKEELFYPSNRD
KIPLLLTLLEEEWPERCIVFANTKHKCEEIWGYLAADGHRVGLLTGDVAQKKRLSLLKQF
TDGDLDILVATDVAARGLHIAEVTHVFNYDLPDDREDYVHRIGRTGRAGESGISISFACE
QYAMNLPAIEEYIGHSITVSQYDPNALLQDLPKPYRLKRQTNFSAQNNNRRKPFRTKR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagaattatttaagttcggcacgtttcgccgatttagccctacatcctttggtg
ttacaggcgttgaacgacaaaggatttgatttttgtacgccgattcaggcgctctcgctg
cccattacgttacgagacaaagatgttgccggacaggcacaaaccggcaccggaaaaaca
atcgcgtttttgaccgcacttttccatcatttattaacctacccgaaacaaacggaagtc
aatcaaccgcgtgctttgattctggcgccaacccgcgaattggcggtgcaaattgaacac
gacgcgcagattttcttaaaaacaacgaaatttaagaccgcacttgcctacggcggtgac
ggctatgacaagcaactcaaagccattgaaaacggcgtggacgtgcttatcggcaccacg
gggcgcgtaattgattatgtgagacagggcgtgattcgtttggatcagattcaaacggtg
gtgctggacgaagcggatcgtatgttcgatttgggttttatccgtgatattcgctatttg
ttacgcaaatgcccgccgccacaacaacgcttgaccatgttgttctccgccaccttgtct
tacaaagtgcgtgaactggcttttgaagatatgaatagcccggaatatgtggaaatcgaa
cctgaacaaaaaaccgggcagcaaattaaagaagaattattttacccgtccaatcgggac
aaaataccgttgttgctgacgctgttggaagaagaatggccggagcgctgtattgtgttt
gccaacaccaaacataaatgcgaggaaatctggggctatttggcggcggacgggcatcgc
gtgggcttattaaccggcgatgtggcacagaaaaaacggctttccttattgaaacaattt
accgacggcgatttggatattttagtggcgaccgatgtggcggcgcgcgggctgcatatt
gcggaagtgactcatgtgttcaattacgatttgccggacgatcgggaagattatgtgcac
cgcatcgggcgtaccggacgtgccggcgaaagcggcatttccatcagcttcgcctgcgag
caatacgccatgaatttgccggcgattgaagaatatatcggacacagcattaccgtgagc
caatacgatccgaacgcgttattacaggatttgccgaagccttatcgattaaaacggcaa
accaatttcagcgcacagaataacaatcgccgcaaaccgtttcgcacaaaacgctag
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