Aggregatibacter actinomycetemcomitans D7S-1: D7S_01650
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Entry
D7S_01650 CDS
T02046
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
aan
Aggregatibacter actinomycetemcomitans D7S-1
Brite
KEGG Orthology (KO) [BR:
aan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aan03009
]
D7S_01650
Enzymes [BR:
aan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
D7S_01650
Ribosome biogenesis [BR:
aan03009
]
Prokaryotic type
rRNA helicases
D7S_01650
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UvrA_inter
AAA_19
WSD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AFI87389
LinkDB
All DBs
Position
complement(1546614..1547945)
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AA seq
443 aa
AA seq
DB search
MTNLIQFADFDLAPELLNALQKKGYQRPTAIQQETIPAAMGGGDVLGSAPTGTGKTAAFL
LPAIQHLLDYPRRKPGAPRVLVLTPTRELAMQVAEQAKELACFTKLSIATITGGVAYQNH
GEIFNKNQDIVVATPGRLLQYIKEENFDCRTVEILIFDEADRMLQMGFGQDAEKIAAETR
WRKQTLLFSATLEGDLLEDFAARTLNEPVKIEAEPSRRERKKIQQWYYHADSHEHKFKLL
ARFIEQEQVSKGIVFVRRREEVRELAENLRKRGIRSAYLEGEMAQTQRNNAIDKLKNGVV
TVLVSTDVSARGIDIDDVSHIMNFDLPYSADTYLHRIGRTARAGKKGTAVSFVEAHDYRL
LGKIKRYTGELLKARVIEGLEPRTKAPKDGEIKTVSKKQKAKKLEKREARKKADKKVKQR
HQDRKNIGKRRKPSASTTAAAVK
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacctcatccaatttgcagattttgatctcgcgcccgaattactcaacgccctt
cagaaaaaaggttaccaacgccccactgcgatccagcaggaaaccattccggcggcgatg
ggaggcggtgacgtattgggttccgcgcccaccggcaccggtaaaacggcggcgtttctg
ttgccggcgattcagcatttgctggattacccacgtcgtaaaccgggtgcgccgcgcgtg
ttggtgttaacgccgacccgtgaacttgccatgcaggtagcggaacaggcgaaggagctt
gcctgcttcaccaaactcagtatcgcgactattacgggcggtgtggcgtatcaaaatcac
ggggaaattttcaataaaaatcaagatattgtagttgccacgccgggacggttgttgcaa
tacattaaagaagaaaattttgattgccgcacggtggagattcttattttcgatgaagcg
gacagaatgttgcaaatggggttcgggcaggatgcggaaaaaattgcggcggaaacccgc
tggcgcaagcaaaccttgttgttctccgcaactcttgaaggcgatttgctggaggatttt
gccgcacgtactttaaacgaaccggtgaaaattgaggcggaaccgagccgccgtgaacgc
aagaaaattcagcaatggtattatcacgccgacagccatgagcataaattcaaattgctg
gcacgcttcattgagcaggaacaggtgagcaaaggtattgtgttcgtgcgtcgccgcgaa
gaagtgcgcgaactggcggaaaatttgcgtaagcgtggtattcgcagcgcctatctggaa
ggcgaaatggcacaaacccagcgcaataatgccatcgacaagctgaaaaacggcgtggta
accgtgttggtttccacggatgtctccgcacgtggcattgatattgatgatgtcagccac
attatgaatttcgatttgccgtacagcgccgacacgtatttgcaccgcatcggtcgcacc
gcacgcgccggcaaaaaaggcacggcggtatcttttgtggaagctcacgattaccgcctg
ctcggtaaaattaaacgttataccggcgaactcttaaaagctcgtgtcattgaaggcttg
gaaccacgcaccaaagcaccgaaagacggcgaaatcaagaccgtcagcaagaaacaaaaa
gcgaagaaactcgaaaaacgtgaagcgcggaaaaaagcggataagaaagtcaaacagcgc
catcaagatcgtaaaaacattggtaagcgccgcaaaccgagcgcttcaaccacggcagca
gccgttaaataa
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