Aggregatibacter actinomycetemcomitans D7S-1: D7S_02311
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Entry
D7S_02311 CDS
T02046
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
aan
Aggregatibacter actinomycetemcomitans D7S-1
Pathway
aan03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aan00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
D7S_02311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aan03019
]
D7S_02311
03009 Ribosome biogenesis [BR:
aan03009
]
D7S_02311
Messenger RNA biogenesis [BR:
aan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
D7S_02311
Ribosome biogenesis [BR:
aan03009
]
Eukaryotic type
Pre-60S particles
RNases
D7S_02311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
HIGH_NTase1_ass
Apc13p
Motif
Other DBs
NCBI-ProteinID:
AFI88010
LinkDB
All DBs
Position
complement(2178454..2179002)
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AA seq
182 aa
AA seq
DB search
MSFDKQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAIHQPDELLNKMSE
WCVKTHMANGLIERVKASKLTERAAELQTLDFLKKYVPKGTSPICGNSVAQDKRFLFKYM
PELADYFHYRHLDVSTLKELAARWKADILNGFNKQNTHLALDDIRESIKELAYYREHFLK
MD
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcgataaacaaaatctgatttggattgatttagaaatgaccgggcttgatccg
gaaaaagaacgtattattgaaatcgccaccatcgtgaccgataaaaatttaaacatcctt
gccgagggccctgtccttgctattcaccagcccgacgagctactgaataaaatgagtgaa
tggtgtgtaaaaacccacatggcaaacggcttgatcgaacgtgttaaagccagcaaactc
accgaacgtgcggcagagctacaaacacttgatttcttaaaaaaatacgttccgaaaggc
acctccccgatttgtggcaacagcgttgcgcaggacaaacgcttcctgtttaaatacatg
cctgaacttgccgactattttcattatcgccaccttgacgtcagcaccttaaaagaactt
gccgcccgctggaaagcggacattttaaacggctttaataagcaaaatacgcatttggcg
ctggacgatattcgtgaatctatcaaagagttagcctattatcgtgaacattttttgaag
atggactaa
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