Halarcobacter anaerophilus: AANAER_0175
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Entry
AANAER_0175 CDS
T06853
Name
(GenBank) mRNA degradation ribonuclease J1/J2 (metallo-beta-lactamase superfamily)
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
aana
Halarcobacter anaerophilus
Pathway
aana03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aana00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AANAER_0175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aana03019
]
AANAER_0175
Messenger RNA biogenesis [BR:
aana03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AANAER_0175
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_6
MupG_C
Motif
Other DBs
NCBI-ProteinID:
QDF27686
LinkDB
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Position
complement(165686..167626)
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AA seq
646 aa
AA seq
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MENNKANNQENEIAKKTTKPEGNQTEKRKPSPKKETSEKKPSPNRRRRNPNNRAKTNNSK
ANNSWINDLRKAHSINEKSHKDRLNPHNKLNLSTNAKVRITPLGGLGEIGGNMMVIETEK
SAIIVDVGMSFPDEDMHGVDILIPDFTYLRQIKDKIAAVIITHGHEDHIGAMPYLFKEMQ
FPIYGTSLPLEMIGSKFDEHKMREHRKLFRPIEKRVPIKIGDFEIEWIHITHSIIDSSSL
AIKTEAGTIIHTGDFKIDHTPIDGFPTDLHRLAYYGEQGVLLLMSDSTNSHSPGFTKSER
AVAPTFDRIFSSAKGRVIMSTFSSNIHRVSQAIEYGLKYGRKVCVIGRSMEKNLEIAMNL
GYIKFPRDQFIEAHEVNKYNDKEVLIVTTGSQGESMSALYRMSIHEHRHVKIKPGDQIIL
SAKAIPGNEASVSGIINHLLKAGATVAYQDFSEIHVSGHAAQEEQKLMLRLVKPKFFMPI
HGEYNHAVKHAKTGIACGVLERNTYIMSDGEQIEVSPKYLKKVKTVKTGKVYIDNQLNHK
ISDDIVIDRQTMANEGVVIIVAHINANDRTIVDRPKVTSFGLVSDRYDKHFAKEIEELLE
TFLKNAKEGIFKNNRILEDEIRKTVRKHCIRKYKKYPMIVPTLFVQ
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaacaaagctaataatcaagaaaacgagatagctaaaaaaactacgaagcca
gaaggtaatcaaacagaaaaaagaaaaccttctcctaaaaaagagacaagcgagaaaaaa
ccaagtcctaacagacgaagaagaaacccaaacaacagagcaaaaacaaataattcaaaa
gcaaacaactcttggattaatgatttaagaaaagctcacagtataaatgaaaaatctcat
aaagatagattaaatccccataataaattaaacctctcaactaatgcaaaagtaagaatc
actccattaggaggattaggtgaaatcggtgggaatatgatggtaatagagacagaaaaa
tctgcaattatcgttgatgttgggatgagtttccctgatgaagatatgcacggtgttgat
attttaatcccggattttacatatctaagacaaataaaagataaaattgcggctgtaatt
attacacatggtcatgaagatcatataggtgcaatgccttatctttttaaagagatgcaa
ttccctatttacggaacttcattaccccttgaaatgattggttcaaaatttgatgaacat
aaaatgagagaacatagaaaactttttagacctattgagaaaagagttcctataaaaata
ggcgattttgaaatagaatggattcatattacccactctattattgattcatcttctttg
gcaataaaaaccgaagccggtactattattcatacaggtgactttaaaatcgaccatact
ccaattgacggattccctacagatcttcatagacttgcatattatggggaacaaggtgta
ttattgttgatgtccgattcaacaaactctcattcaccgggatttacaaaatcagaaaga
gccgttgctcctacttttgatagaatattctcatctgcaaaaggtagagttattatgtct
actttctcttcaaatattcacagagtctcacaagcaattgaatatggcttgaaatacgga
agaaaagtttgcgtaatcggaagatcaatggaaaaaaaccttgaaattgccatgaacttg
ggatatataaaatttccaagagatcaatttattgaagctcatgaagtaaataaatacaat
gataaagaagttttaatcgtaactactggaagtcaaggtgaatcaatgagtgccttatat
agaatgtcaattcatgaacacagacatgtaaaaataaaaccgggagatcaaattattctt
tcagcaaaagcaatccccggaaatgaagctagtgtttcaggaattattaatcatcttctt
aaagcaggagcaactgttgcttatcaagatttcagcgaaattcatgtttcaggtcacgca
gcccaagaagaacaaaaattgatgcttcgattagttaaacctaaattctttatgcctatt
cacggagagtataatcatgctgtaaaacatgcaaaaacaggtattgcatgcggagtttta
gaaagaaatacttatattatgagtgacggtgagcaaatagaagtaagcccgaaatatctt
aaaaaagtaaaaacagttaaaacagggaaagtttatatagataatcaactaaatcataaa
atatcggatgatatagtaatagatagacaaacaatggcaaatgaaggtgtagttattatt
gttgcacatattaatgcaaacgacagaacaatcgtagatagacctaaagttacatctttt
ggattagtttcggatagatatgacaaacattttgcaaaagagattgaagagttattagag
actttcttgaaaaatgcaaaagaaggtatctttaaaaataatagaatcttagaagatgaa
ataagaaaaactgtaagaaaacattgtattagaaaatataaaaaataccctatgattgta
cctacactttttgtacaataa
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