Halarcobacter anaerophilus: AANAER_0402
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Entry
AANAER_0402 CDS
T06853
Name
(GenBank) UvrD/REP family helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aana
Halarcobacter anaerophilus
Pathway
aana03420
Nucleotide excision repair
aana03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aana00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AANAER_0402
03430 Mismatch repair
AANAER_0402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aana03400
]
AANAER_0402
Enzymes [BR:
aana01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AANAER_0402
DNA repair and recombination proteins [BR:
aana03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AANAER_0402
MMR (mismatch excision repair)
Other MMR factors
AANAER_0402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
eIF3_p135
Motif
Other DBs
NCBI-ProteinID:
QDF27904
LinkDB
All DBs
Position
398189..400243
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AA seq
684 aa
AA seq
DB search
MSENFLNSLNKSQQIAAQHIDGALLILAGAGSGKTKTITTRLAYLISIGIDPSSILTLTF
TNKAATEMRERAFSMIDPNMINTPPLLCTFHKFGLLFLKFYMTELGRKNSFIIIDNDDKK
RILKSIDKEITTSLLVSEISKYKNTLLTPSEAKAAAQLKLYQQIADIYEKYEAYLLKNNL
VDFDDLLLLPYLILEKNEQLAKQISEKYQYVMVDEYQDTNELQYKLLRKLCFTHENLCVV
GDDDQSIYGWRGATIKNILNFADNFKDTKVIKLEENYRSTDTILEHANQLIEHNRDRLGK
KLIGTRQKGDSVKVYESQDETEETRKIIDDIKKLIIEGESAKDIAILFRVNALSRSLEEG
FNKAGINYKLIGGMKFYERAEIKDLIAYFRILTNSTDNFSFKRVVNKPKRGIGKTTIEKL
DAKSIELKKPIFSIIEESSPEELTAIVGKKNSRTLKVFIASIMDLRDTLEESKMRFLDLF
EDTFDYRASFDSVPDGFDRQANIDEFYGYIRDFFIQNPHLNLEDFLNEIALESEQGELND
QAVSMMSIHSSKGLEYKHIFIIGLEEGFFPIIGEGSNIEEERRLGYVAITRAMDRLTLSF
VHSRFYKGKRATLLKSRFLSESGLIKGSLTIEKQSSYKKGDLVQHKIFGMGRVQKASKAG
KDYKLTINFGGTRRDILSSFVEKI
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaaattttttaaattcactaaataaatcacaacaaattgcggcacaacatata
gacggtgcgctgttgattttagcaggtgcaggttcagggaaaacaaaaactattacaaca
agactcgcttatttaatctccataggaatcgatcctagctctattttgactcttactttt
acgaacaaagctgccacggaaatgagagaaagagctttttcaatgattgatcctaatatg
ataaatactcctcctttgttatgtactttccataaattcggtctgctttttttaaaattt
tatatgacggaattaggtagaaaaaactcttttataataattgataatgatgataaaaaa
agaattttaaaatctattgacaaagagattacaacctctttattggtatcggaaatctca
aaatataaaaatactcttttaaccccaagtgaagcaaaagcagcagcacaattaaaactt
tatcaacaaatagcggatatatatgaaaaatatgaggcatacttattaaaaaacaatttg
gtagattttgatgatttacttcttcttccttatttaattttggagaagaatgagcaatta
gccaagcaaataagtgaaaaatatcaatatgtgatggttgatgagtaccaagatacgaat
gaactgcaatacaaacttctaagaaaattatgttttactcatgaaaatttatgtgtagta
ggagatgacgaccaatcaatttacggctggcgtggagcaaccataaaaaatattttgaat
tttgcagataactttaaagatacgaaagttataaaactagaagagaattatagatctaca
gatacaatcttagagcatgctaatcaactaatagaacataacagagaccgtttaggtaaa
aaacttataggaactagacaaaaaggcgacagcgtaaaagtttatgagtctcaagatgaa
actgaagagacaagaaaaattatagacgatataaaaaaacttataatagaaggtgaatct
gcaaaagatatagcaatactttttagagttaatgccctttcaagatctttagaagagggc
tttaacaaagcaggaatcaactataaactaataggcggtatgaagttctacgaaagagcg
gagattaaagatttaatcgcatattttagaatattaactaattcaaccgataatttctct
tttaaaagagtagtaaataaaccaaaaagaggaatcggaaaaaccactatagaaaaactt
gatgcaaagtctattgagttaaaaaaacctattttctcaattattgaagagagttcacct
gaagaacttactgcaatagtaggtaagaaaaactcaagaacacttaaagtttttattgct
tcaataatggacttaagagatactttagaagaatcaaaaatgagatttttggatcttttt
gaagatacttttgattatagagcctcttttgattccgttccagacggttttgacagacaa
gcaaatatcgatgagttttacggatatatcagagatttctttatacaaaatcctcatctt
aatttggaagattttttaaatgagattgctttagaatccgaacagggtgaattaaacgat
caagctgtttcaatgatgagtattcactcttcaaaaggtttagagtataaacatatcttt
ataatagggcttgaagagggattttttcccattatcggggaaggaagcaatattgaagaa
gagagaagattaggatatgtcgcaattacgagagcaatggacagattaactctatctttt
gttcactcaagattttataaaggtaaaagagcaaccttgctaaaaagcagattcttaagt
gaatcgggacttattaaaggcagtttgactattgaaaaacaatcttcttataaaaaagga
gatttggtacaacataaaatttttggaatgggaagagttcaaaaagcatcaaaagctgga
aaagattataaactaacaattaattttggcggaactagaagagatatcctttcatctttt
gttgaaaaaatctaa
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