Halarcobacter anaerophilus: AANAER_1849
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Entry
AANAER_1849 CDS
T06853
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
aana
Halarcobacter anaerophilus
Brite
KEGG Orthology (KO) [BR:
aana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aana03019
]
AANAER_1849
Enzymes [BR:
aana01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AANAER_1849
Messenger RNA biogenesis [BR:
aana03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AANAER_1849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
Helicase_C
ResIII
Flavi_DEAD
AAA_30
AAA_19
Cas3-like_C_2
GAD
HA2_N
Cortex-I_coil
Tantalus
Motif
Other DBs
NCBI-ProteinID:
QDF29322
LinkDB
All DBs
Position
complement(1860969..1863500)
Genome browser
AA seq
843 aa
AA seq
DB search
MKNLPIHDVLDDIKSRLNHNSTLILQAPPGAGKSTVVPISLLNESWLEGKMIIMLEPRRV
AARMVAEQMARLLNEKVGQSVGYQVKMDSCFSKSTKLLVVTEAILVRKLQNDQALEDVAM
VIFDEFHERSIHTDLSLALSLQVQELLRDDLKLLIMSATLDSSELQNLLGKVPVITSKGK
AYSVENIYLEANIKQPDIKSINTTILNTIFKALEGDDGDILVFLAGSKEIRRLKTLLEER
LKNKKEKEIEVFPLYSALSKIEQDRAIRKSKKRKIILATNIAQTSLTIEGVKVVIDTGLE
KLALYNYSTGMNHLNLSFISEDSAIQRAGRAGRLSEGKCYRLWHKSKILQKATKPEILRC
DLSSFFLDLALWGTKDIKELNFLDYPQKEVEAGSKEMLQELKMLDENYEITSIGKKALSL
GVHPRFAFMILKANDLGFAYEASLLSSLLSEKDIFKNTYTDSDIYLRFIHLYEKEFDNTY
INSYLAKNILKQAQFFYSKLKAIQTVNVNKTKIDEETLAVLLLFAYPDRLAHQREKNENR
YKLSNGKGAILNPEDSLFNEEFLIAPVLNAQNKNSYINLALKISLHTIEEKFASYIKRKK
SIIYNKENKKFDTKEEYYFYELKLYSKPISLESEYDFSKLLLDLIKKEGLELLTWSKKAN
DLKNRINFINENMDIALPSFETTSLLDTMQEWLTPYLNEIKTIKQLEALDLYSILLGRLS
WENQQLIDTLAPSYIKVPSGSNIKIDYSNSKTPILAVKIQEIFGLKQTPKILDNKIALQI
HLLSPAQRPIQITYDLKSFWENSYEEVRKELFSKYKKHYWPENPFEAVATNKTKKNMMKD
KRL
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatttacctatccatgatgttttagatgatataaaaagcagattaaatcacaac
tcgactttgatacttcaagcacctccaggagcagggaaaagtacggttgttcctatctct
ttattaaatgagtcttggcttgagggaaaaatgattattatgcttgaacctcgcagggtt
gctgcccgtatggttgcagagcaaatggctagacttttaaatgaaaaagtagggcaaagc
gtcggttatcaagttaaaatggatagttgcttctctaagagtacaaaactacttgtggta
acagaggctattttagtgagaaaacttcaaaatgaccaggctttggaagatgttgctatg
gttatttttgatgaatttcatgaaagaagtatacatactgatctctctttagccttatct
ttacaagttcaagagcttttaagagatgatttaaaactgcttattatgtctgcaactctt
gattcatctgagctacaaaatcttttaggaaaagttcccgttataacttcaaaaggcaaa
gcctatagtgtagaaaatatttatcttgaagcaaatataaaacaacctgatataaaaagt
ataaatacaactattttaaatactatatttaaagccttggaaggcgatgatggggatatt
ttagtctttttagcaggttcaaaagagattagaagacttaagactttgcttgaagagaga
ttaaaaaataaaaaagaaaaagagatagaagtctttcctttatattctgctcttagtaaa
atagagcaagatagagccataaggaaatcaaaaaaaagaaaaataatattagctacaaat
atagcccaaacctcattgacaatagagggtgtaaaagttgtaattgatacaggcttagag
aagttggcactttataactattctactggaatgaatcatttaaatctctcttttatatca
gaagatagtgcaattcaaagagcaggtagagccggaagattaagtgaaggaaagtgttat
agactttggcacaaaagtaagattttgcaaaaagcaactaaacctgaaatattaagatgt
gatttaagttcatttttccttgatttggctctttggggtactaaagatataaaagagttg
aactttttagactatcctcaaaaagaggtggaagccggttcgaaagagatgttacaagag
cttaaaatgttagatgaaaattatgaaataacatcaataggcaaaaaagctctaagtttg
ggagttcatcctagatttgcttttatgatattaaaagcaaatgatctaggttttgcttat
gaagcttctcttttatcttcacttttaagtgaaaaagatatttttaaaaatacttatact
gacagtgatatttatttaagatttatacatttgtatgaaaaggagtttgataatacttat
ataaactcatatctagcaaaaaatattttaaaacaagctcagtttttttattccaaatta
aaagctatacaaacagttaatgtaaataaaacaaaaatagatgaagaaactttagctgtt
ttgcttctttttgcctatcctgacaggttggcacatcaaagagaaaaaaatgagaataga
tataaactaagtaacggcaaaggtgctattttaaatcccgaagattcactttttaacgaa
gagtttttaatagcacctgttttaaatgcacaaaataaaaactcatatataaatcttgct
cttaaaatatctttgcacactatagaagaaaagtttgcttcatatataaagagaaaaaaa
tcaattatctataacaaagagaataaaaagtttgatacaaaagaagagtactatttttac
gaactaaaactatattccaaacctatctccttggagtcagaatatgatttttcaaagctt
cttttagatttgattaaaaaagagggcttagaacttttaacttggagcaaaaaagcaaat
gatttaaaaaacagaattaattttataaatgaaaatatggatattgctttacctagtttt
gaaacaacttcattgttagataccatgcaagagtggcttactccttatttaaatgaaatc
aaaacaataaaacaactcgaagctttggatctctattctattttattaggaagactttct
tgggaaaatcaacagcttatagatactttagccccaagttatataaaagtgccaagcggt
tcaaatataaagattgattactcaaacagtaaaacgcctatattagcggtaaaaatacaa
gagattttcggtttaaaacaaactccaaaaatattggacaataaaattgcactgcaaata
catcttttaagtcctgcacaaagacccatacaaataacatatgatttaaaaagtttttgg
gaaaattcatatgaagaagttagaaaagagctgttttcaaaatacaaaaagcattattgg
ccggaaaatccttttgaagctgttgcaacaaataaaaccaaaaaaaatatgatgaaagat
aaaaggttgtaa
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