Halarcobacter anaerophilus: AANAER_1990
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Entry
AANAER_1990 CDS
T06853
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aana
Halarcobacter anaerophilus
Pathway
aana03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aana00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AANAER_1990 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aana03019
]
AANAER_1990 (recQ)
03400 DNA repair and recombination proteins [BR:
aana03400
]
AANAER_1990 (recQ)
Enzymes [BR:
aana01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AANAER_1990 (recQ)
Messenger RNA biogenesis [BR:
aana03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AANAER_1990 (recQ)
DNA repair and recombination proteins [BR:
aana03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AANAER_1990 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
HTH_40
ResIII
Helicase_Sgs1
DUF1539
Motif
Other DBs
NCBI-ProteinID:
QDF29461
LinkDB
All DBs
Position
complement(1993895..1996006)
Genome browser
AA seq
703 aa
AA seq
DB search
MNNKFEVLKNVFGHESFRSFQEDVVDTILSKQDVLTILPTGGGKSLCYQLPALLMSGITV
VISPLIALMQDQVKALNDLNINAAMISSASNNEENTQTLQMLLKGELKFIYVAPERFTSN
EFVGVLQRVEINYFVIDEAHCVSGWGHEFRAEYRNLNILKRLFPNTSIAAFTATATKRVE
TDIDQSLKLQNAKHFRAKTIRDNLEIKVEPRISNGKPQILNFLKKHKNLCGIIYTFTRKE
AESLADFLCEKGFSAKAYHAGLSSEVKNRVFEDFVYEKIDIVVATIAFGMGIDKSNIRFV
IHTSLPKTLENYYQEIGRAGRDGEMSYTYLLYSKSDEVKRKIQIQEAIDSSYKQIGLEKL
EAMYRYCVSNSCRHRLIAEYFEDKVDDCKTLCDNCTKGEVEQIDVSVDAQKLLSAVYRSE
QRFGFNHIIDILRASKNKKLLEFGHDKLSVYGIGINKSKNEWIAIVDRLIDIKALSFGEF
RALKITNLGFKILKAEEKLFIDSDKLGIAKKVEEEQEELTFDEQLYERFKELRRKIALDI
EVPAYMVFSDKSLKEFASKLPVTKEQMIDINGVGLVKFEKYGEEFLELSKALKEEFSKEL
ENHTPLKKLTKTYLDTLELINEGKSLEEISEIRALAITSILSHLTLLYEHKKLTKEKKEE
LLKPLEIPEEIKKWIESGLKLQSAKELRQYLYLYEYLAKESDI
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgaataataaatttgaagtattaaaaaatgtttttggtcatgaaagtttcagaagcttt
caagaggatgttgtagatacgattttatcaaagcaggatgttttgactattttgccgaca
ggcggcggtaagtctttgtgttatcagcttcctgctttgcttatgagtggaattacggtt
gttatttctcctcttattgcacttatgcaagatcaagtgaaagctttaaatgatttaaac
ataaatgcagcaatgataagttctgcttcaaacaatgaagagaatactcaaactctgcaa
atgcttttaaagggtgaattaaaatttatttacgtagctcccgaaagatttacttcaaat
gagtttgtaggagttttacaaagagtagagataaactattttgtaatagatgaagctcac
tgcgtaagcggttggggacatgaatttagagcagaatatagaaatttaaatattttaaaa
agacttttcccaaatacttcaattgccgcttttactgcaactgctacaaaaagagttgaa
acagatatagatcaaagcttaaaacttcaaaatgcaaaacatttcagagcaaaaactatc
agagataatcttgaaattaaagttgagcccagaatatcaaacggaaaacctcaaattctg
aattttttaaaaaaacataaaaatttgtgcggaattatttacacgtttaccagaaaagaa
gcagagagcctggctgattttttatgcgaaaaaggttttagtgcaaaagcttatcatgca
ggtttaagcagtgaagtaaaaaaccgggtatttgaagattttgtatatgaaaaaatagat
atagttgttgcaacgattgcttttggaatgggtatagataaatcaaatatcagatttgta
attcatacaagcctgccgaaaactttggaaaactattatcaggaaataggtagagcagga
agagacggtgagatgtcttatacttatcttttatactcaaaatcagatgaggtaaaaaga
aaaatacaaattcaagaggcaatagacagctcctacaaacaaataggtttggaaaaacta
gaagctatgtacaggtattgcgtaagtaacagttgccggcatagacttattgccgaatat
ttcgaagataaggttgatgattgtaaaactttgtgtgataattgtacaaaaggtgaagtt
gaacaaattgatgtaagcgtagatgcacaaaaattgttaagtgcagtttacagaagtgaa
caaaggtttggctttaatcatattatagatatattaagagcttcaaagaacaaaaagctt
ttagaattcggtcatgataaattaagcgtatacggtataggaattaataaaagcaaaaat
gagtggatagcaatagttgatagacttattgatataaaagctttgagtttcggggagttt
agagccttaaaaataacaaatttgggttttaaaatattaaaagcagaagagaaacttttt
atagacagcgataaattgggaattgccaaaaaagtagaagaagagcaagaagaactgact
tttgatgaacagttgtatgaaaggtttaaagagttaagacgaaaaatagctttagatatt
gaagttcctgcttatatggtattttcagataagagtttaaaagagtttgcttcaaaactt
cctgtaacaaaagagcaaatgattgatataaacggagtagggcttgtaaaatttgaaaaa
tacggtgaagaatttttagagttgtcaaaagcattaaaagaggaattttccaaagagtta
gaaaatcatacacctttaaaaaaacttacaaaaacatatttagataccttagagcttata
aatgagggcaaaagtttggaagagatttccgaaattagagctttggcaataacttctata
ctttctcatttaactttgttatatgaacataaaaaacttacaaaagagaaaaaagaagag
cttttaaaacctcttgaaattcccgaagagattaaaaaatggattgaaagcggtttaaaa
cttcaaagtgcaaaagagttgagacaatatttatatttatatgaatatttagcaaaagag
agtgatatttaa
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