Halarcobacter anaerophilus: AANAER_2486
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Entry
AANAER_2486 CDS
T06853
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
aana
Halarcobacter anaerophilus
Pathway
aana03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aana00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AANAER_2486 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aana03021
]
AANAER_2486 (rpoB)
03400 DNA repair and recombination proteins [BR:
aana03400
]
AANAER_2486 (rpoB)
Enzymes [BR:
aana01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AANAER_2486 (rpoB)
Transcription machinery [BR:
aana03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AANAER_2486 (rpoB)
DNA repair and recombination proteins [BR:
aana03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AANAER_2486 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QDF29942
LinkDB
All DBs
Position
complement(2482594..2486739)
Genome browser
AA seq
1381 aa
AA seq
DB search
MLNSLKSGNRLRVDFAKNPQQIEIPNLLQLQQSSYENFLMIGKDDRTEAGIEKVFKSVFP
IHDAQNRITLEYIGSEVGKPKYDVRESMVRGLTYSIPLKINIRLTLWDLDEKTGEKIGVK
DMKEQSLFIREIPLMTDRTSFIVNGVERVVVNQLHRSPGVIFKEEESNTAGNKLIYTGQI
IPDRGSWLYFEYDAKDVLYVRINKRRKVPVTILFRALGYSKEDIIKLFYPILNVKIKNNK
FLTEFNPDDFTGRVEFDIKDDKGNLVIAAGKRLTARKAKALVDGGLKLVEYPVDLLMDRS
TANTIYDPESGEVLFDALTPLDELKLKKLLDLGFDNFDIANDLAPSVDDSIINAFKADAE
SLKLLKQTEQIDDENDLSAIRIYKVMRPGEPVTKEAAKEFVRKLFFDPERYDLTKVGRMK
MNHKLGVSVPEYVTVLTYEDIIKTVQYLVKVKSGHGHIDDRDHLGNRRIRAIGELLANEL
HSGLIKMQKAIRDKMTTLSGTLEDIMPHDLVNSKMITSTITEFFTSGQLSQFMDQTNPLS
EVTHKRRLSALGEGGLVKERAGFEVRDVHPTHYGRICPVETPEGQNIGLINTLSTFSKVN
DLGFIEAPYKKVIDGVVTDEIEYYTATQEEGKTIAPGSTKVDDNGKIIEPLIEARQDGEI
LLVERSKVNLIDISSQMVMGVAASLIPFLEHDDANRALMGSNMMRQAVPLLRPNAPIVGT
GLEKIVARDAWEAIKAKRGGIIEKADAKNIYIRGEDETGAFIDHYEVNKNVRTNNNTSFG
QRTAVKEGDVVEKGQVIADGPSMDNGELAVGVNAMVAFMPWNGYNYEDAIILSRRLIKED
AFTSVHIYEKEVECRELKHGNEEITRDLPGVKEESITHLDNSGIIKVGTYVKPGMILVGK
VTPKGEIKPTPEERLLRAIFGEKAGHVINKSLYCPTSMEGVVVDVKVFTKKGYEKDERAI
TEIEAEKAELDLKHHDKLLMLDREEILKINDLLSKSPLSKDVEVEGTVYKKGDSIPVDIL
AGVNRFAMKKVVSSYSGDVEKKYNDIKEYFIKQKATLREEHEEKIQVLEHDDILPSGVIK
QVKVYVATKRKIKVGDKMAGRHGNKGIVSNIVPQVDMPYLENGTTVDVILNPLGVPSRMN
IGQILEVHLGLAGRKLGYQIQEIFDAKKADFITELRTKMAEIADVAKLMNGKKFMENLSD
DELINYARDWSKGVRFATQVFDGAKEAEFKKLFELAKIDSDGKSTLYDGKTGEKMKERVN
VGYMYMLKLHHLVDEKVHARSTGPYSLVTQQPVGGKALFGGQRFGEMEVWALEAYGATNV
LKEMLTTKSDDVEGRTKAYRAIANGENVPSSGVPETFFVLTKELKALGLDVEIFEEVEDD
E
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atgttaaactctttaaaatctggtaatagacttagagttgattttgcaaaaaatcctcaa
caaatcgaaattccaaatttattacaattacaacaaagttcatatgaaaattttctaatg
ataggaaaagatgatagaactgaagcgggtattgaaaaagtattcaaatcagtgttccca
attcatgatgctcaaaatagaataacattagagtatataggcagcgaagtggggaaacct
aaatatgatgtaagagaatcaatggtaagaggacttacttactctattccgttaaaaatt
aatattagacttacattatgggatttagatgaaaaaaccggtgaaaaaatcggtgtaaaa
gatatgaaagagcaatctttattcatccgagaaattcctctaatgacagacagaacttca
tttattgtaaatggtgttgaaagagttgttgttaatcagttacacagatctccgggtgta
atttttaaagaagaagaatcaaatacagcaggtaacaaattaatttatacagggcaaatt
attcctgatagaggttcttggttatattttgaatatgatgcaaaagatgtattatatgta
agaatcaacaaaagaagaaaagttcctgttacaattctttttagagctttaggttactca
aaagaagatattatcaaacttttttatcctatattaaatgtaaaaattaaaaacaataaa
tttttaactgaattcaatcctgatgattttacgggaagagttgaatttgatattaaagat
gataaaggtaatttagtaattgcggcaggaaaaagattaactgctagaaaagcaaaagct
ttagtagacggcggattaaaacttgttgaatatccagttgatttattaatggatagaagt
acagcaaatactatttatgatcctgaatcaggtgaagttttatttgatgctttaacaccg
cttgatgaattaaaacttaaaaaacttcttgatttaggatttgataattttgatatagca
aatgatttagctcctagcgttgatgattctattattaatgcttttaaagcagatgctgaa
tctttaaaattattaaaacaaacagaacaaattgatgatgagaatgatttatcagctatt
agaatttataaagttatgagaccgggtgaacctgtaacaaaagaagcagctaaagagttt
gttagaaaactattttttgatcctgaaagatatgacttaacaaaagtcggtagaatgaaa
atgaatcataagttaggtgtaagtgttcctgaatatgttactgtattaacttatgaagat
attataaaaacagttcaatatttagttaaagttaaatctgggcacggtcatattgatgat
agagaccacttaggaaacagaagaattagagcaatcggggaacttcttgcaaatgagttg
cactctggacttattaaaatgcaaaaagcaattagagataaaatgactacattaagtgga
acattagaagatattatgccacacgatttagttaactctaaaatgattacttcgacaatt
accgagttctttacatctgggcaattatctcaatttatggatcaaacaaacccattatct
gaggttactcataaaagaagactttctgcacttggtgaaggtggtttagtaaaagagaga
gctggatttgaagtaagggacgttcacccgactcactacggaagaatctgtccagttgaa
actccagagggacaaaatattggacttataaatactttgtcgactttttcaaaagttaat
gatttaggatttatcgaagctccttataaaaaagttattgatggtgtagttactgatgaa
attgaatactatactgcgactcaagaagaggggaaaactattgctcctggttcaacaaaa
gttgatgacaacgggaaaattatcgaacctctaattgaagctagacaagacggtgaaatc
ttgttagttgagagaagtaaagttaatttgattgatatctcttctcaaatggtaatgggg
gttgcagcttcacttattcctttcttggaacacgatgatgccaacagagccttgatggga
tcaaatatgatgagacaagccgttcctttacttagaccaaatgcacctattgtaggaaca
gggttagaaaaaatcgtagcaagagatgcttgggaagcaattaaagccaaaagaggcggt
attattgaaaaagccgatgcaaaaaatatttatatcagaggtgaagatgaaacaggagct
ttcatcgatcactatgaagtaaataaaaacgttagaacaaataataacacatcttttgga
caaagaacagctgtaaaagagggtgatgttgtagaaaaaggtcaagttattgctgacgga
ccgtctatggataacggagaattagcagtaggtgttaatgcaatggttgcctttatgcct
tggaacggttataactacgaggatgcgattatcctttctagaagattgattaaagaagat
gctttcacctctgttcatatttatgaaaaagaagttgagtgtagagagttaaaacacggt
aatgaagagataacaagagatcttccgggtgtaaaagaagagtctattactcatctagat
aattcaggtattattaaagtaggaacatatgttaaaccaggaatgatacttgtaggtaaa
gtaactcctaaaggtgaaatcaaaccaactcctgaagagagattgttaagagcaattttc
ggtgaaaaagcaggacatgttataaataaatctttatactgtccgacatcaatggaaggt
gtagttgttgatgtaaaagtattcactaaaaaaggttatgaaaaagacgaaagagctatt
accgaaatagaagcagaaaaagcagaacttgatttaaaacatcatgataaacttttaatg
cttgatagagaagagattctaaaaatcaatgatttattatctaaatctcctttatcaaaa
gatgtagaagtagaaggaactgtttataaaaaaggtgacagtattcctgttgatatttta
gccggtgtaaacagatttgctatgaaaaaagttgtatcatcatattcaggtgatgttgag
aaaaaatataatgatattaaagagtattttataaaacaaaaagcaactttaagagaagaa
catgaagaaaaaattcaagttctagagcatgatgatattttaccaagcggtgtaattaaa
caagttaaagtttatgtagcaacaaaaagaaaaatcaaagtcggggataaaatggcagga
cgacacggtaataaaggtatcgtttcaaacattgttcctcaagttgatatgccgtattta
gaaaacggaactacagttgacgttattcttaacccgctaggggttccttcaaggatgaat
atcgggcaaatcttagaagtacacttaggacttgcaggtagaaaactgggatatcaaatt
caagagatttttgatgctaaaaaagcagattttattactgaacttagaacaaaaatggca
gagattgccgatgttgctaaattaatgaacggtaaaaaatttatggaaaatttatctgat
gatgagctaataaattatgcaagagattggtcaaaaggtgttagatttgctactcaagta
tttgatggagcaaaagaagcagagtttaaaaaattgtttgaattagcaaaaatcgattct
gacggtaaatcaacactttatgacggtaaaactggtgaaaaaatgaaagagagagtaaac
gtaggttatatgtatatgttgaaacttcaccacttagttgatgaaaaagttcacgcaaga
tctacaggaccttactcacttgtaacacaacaaccagttggtggtaaagcactatttggt
ggacaaagattcggggaaatggaagtttgggcacttgaagcatatggtgctacaaatgta
ttaaaagagatgcttacaacaaaatcagatgatgttgaaggtagaacaaaagcttataga
gctatcgcaaacggtgaaaatgttccaagttctggtgttccagaaacattcttcgtatta
actaaagagttaaaagctttagggttagatgtagagattttcgaagaggtagaagacgat
gagtaa
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