Halarcobacter anaerophilus: AANAER_2644
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Entry
AANAER_2644 CDS
T06853
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
aana
Halarcobacter anaerophilus
Pathway
aana03030
DNA replication
aana03430
Mismatch repair
aana03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aana00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AANAER_2644 (holA)
03430 Mismatch repair
AANAER_2644 (holA)
03440 Homologous recombination
AANAER_2644 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aana03032
]
AANAER_2644 (holA)
03400 DNA repair and recombination proteins [BR:
aana03400
]
AANAER_2644 (holA)
Enzymes [BR:
aana01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AANAER_2644 (holA)
DNA replication proteins [BR:
aana03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AANAER_2644 (holA)
DNA repair and recombination proteins [BR:
aana03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AANAER_2644 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
Sigma54_activ_2
Motif
Other DBs
NCBI-ProteinID:
QDF30090
LinkDB
All DBs
Position
complement(2647090..2648070)
Genome browser
AA seq
326 aa
AA seq
DB search
MYKNEFDNLLNQNVTFSAYMFYGQSNFLIEYYTDLLANRLGSFDEIEKLYFDDFDFKYAK
DKLLQSSLFASNNILVIKLEKKLNKNEVTQLIEACNINKDSKVVFCCMDDSEFKTMAGYF
TKKLNAVSVRMFNPFPNEAIRLIENHAKALNMRYELSAFNNLYFMHRQDLSLCINDLKKL
AILDEVITSDLVYKHCFGIGAVNFEDFLHNLFASQDISDELEGLFEGGMNEIYLLNQISS
FVQQLFMISSYIRVYGTANAKEILGFVPPKNVWEKKTRLAMNIKPEKFSEILQYLLNIEL
ELKSSKISNQNLYLQASLRKISVLIR
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaaatgaattcgataatctgttaaatcaaaacgtaacttttagtgcttatatg
ttttatgggcaatcaaactttttaattgagtattatactgatttgcttgcaaatagactc
ggaagtttcgatgaaatagaaaagctctattttgatgattttgattttaaatacgcaaaa
gacaaattacttcaatcttcgctttttgcttcaaataatattttggttataaaattggag
aaaaagcttaataaaaacgaagttactcagttaatagaagcttgtaatataaataaagat
tctaaagttgttttttgttgtatggatgacagtgaattcaaaactatggcaggatatttt
acaaaaaaattaaatgcggttagcgtacggatgtttaatccttttcccaacgaagcaata
agacttatcgaaaatcatgcaaaagctttaaatatgagatatgaactttcagcttttaat
aatctttactttatgcacagacaagatcttagtttatgtataaatgatttaaaaaaatta
gctattttagatgaggttataacttctgatttagtatataaacactgctttggaataggg
gcagtcaattttgaagattttttgcataatctttttgcttcccaagatataagtgatgaa
ttagaaggactttttgaaggagggatgaatgaaatttatcttttaaatcaaataagttct
tttgttcaacagctttttatgataagctcttatataagagtttacggaactgcaaacgcc
aaagagattttaggttttgtacctcctaaaaacgtatgggaaaagaaaactaggcttgct
atgaatataaaacctgaaaagttttcggaaattcttcaatatcttcttaatattgaactt
gaactaaaatcctcaaaaatctcaaatcaaaatctatatctgcaagcttctcttaggaaa
atttcagttttaattagataa
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