Halarcobacter anaerophilus: AANAER_2883
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Entry
AANAER_2883 CDS
T06853
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aana
Halarcobacter anaerophilus
Pathway
aana03030
DNA replication
aana03430
Mismatch repair
aana03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aana00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AANAER_2883 (dnaE)
03430 Mismatch repair
AANAER_2883 (dnaE)
03440 Homologous recombination
AANAER_2883 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aana03032
]
AANAER_2883 (dnaE)
03400 DNA repair and recombination proteins [BR:
aana03400
]
AANAER_2883 (dnaE)
Enzymes [BR:
aana01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AANAER_2883 (dnaE)
DNA replication proteins [BR:
aana03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AANAER_2883 (dnaE)
DNA repair and recombination proteins [BR:
aana03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AANAER_2883 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QDF30324
LinkDB
All DBs
Position
2918403..2921948
Genome browser
AA seq
1181 aa
AA seq
DB search
MSQTPEFTHLHLHTEYSLLDGANKITPLAKKVKELGMKSVAMTDHGNMFGAIYFYNAMRK
EGIKPIIGMEAYIHNSEEISDKTTRQRFHLCLYAKNDTGYKNLMYLSSQAYMHGFYYYPR
INKKILRENSEGLVCSAACLQGEVNWHLNTNNERNVKFGAKGYERAKEIALEYKEIFGDD
FYLEIMRHGIADQLFIDDMILKISKETGIKVVATNDTHYLEQKDALAHEAFMCIAMNKLY
DDPNRLRHSVHEFYLKSPEQIAKLYADIPEAIATTQEIADKCNLEIKLGNPTPPNFKFTR
QKLTELGLEIPEPEEEYSLENDTALFVHVSREGLEKRLKIVPKEKHEEYRQRLQKEIDII
TGMKFPGYMLIVWDFVRAAKEMKIPVGPGRGSAAGSLVAFSMEITDIDPMPYGLLFERFL
NPERVSMPDIDMDFCQSRRGEIIDYVVKQYGRNNVAQIITFGKLLAKGVIRDVARVLDMP
YSKADAMAKLIPDELGIDLKSSWEKEPKIKELYDSDPQAKRVWDFALALEGLNRNAGTHA
AGVVISNDPLWKKTPLFKPSGMETIATQYNGKFVEDVDLIKFDFLGLKTLTVIDEANKLV
EKRHGKKIDFIQIDVNDKGVYDLVQSGDTIGLFQIESAGMQDLCKRLKPSSFEDLVAILA
LYRPGPMESGMLDDFIDRKHGRAKIDYFHDELEPALKPILENTYGVIVYQEQVMQIVQSV
GGFSLGGADLVRRAMGKKIKAEMDRLKGEFADGAEKKGFTRAYAEELFDLIVKFAGYGFN
KSHSAAYALVTFYTCYLKCYYPTEFMAALLTLEKDNTDKVVKYVDEVKRLDIELFPPDIN
KSDLVFSATKIDDKEVVMFGMGAIKGAGDVAINSILKERNKNGIFKDLADFVSRIDGSKV
NKRVIESLAKAGALDCFEYSRRALLEQIELIGEAVGKAMQLKKQTTSSLFGDDKEMLTVD
IDLEHLPEFDQKEILEFEKASLGFYVSGHPLDSYREELDKISYTLSSELDEVADGSQALI
IGKIEEITEKISKKGNKFGIANILDLHGNIEVMLFENRLKEIREEFDINEPIAFKVKVSR
DGDFTRLSILKIESLKDAQKEKVKTKHKEKEEPPLTVAVPYIEKEDTMYKLFDLIAHNQG
RRELKVIIKTKLADIELETDFRVTSNMEEYIKQIEGAHVVA
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaactcctgaatttacacatttacatctacataccgaatactctttgcttgat
ggagcaaataagattacacctttggcaaaaaaggtgaaagaattaggaatgaaaagtgtt
gctatgacagaccatggaaacatgtttggagcaatctatttctataatgccatgagaaaa
gagggaataaagccgattataggaatggaagcctatatccacaactcggaagaaatatcc
gataaaactacaaggcaaagattccacctctgtctttatgcaaaaaacgacacaggatat
aaaaacttaatgtatctaagctcacaagcatatatgcacggtttttattattatccaaga
atcaacaaaaaaatattaagagaaaattccgaaggtttggtttgcagtgctgcctgcctt
caaggagaagtaaactggcacctaaatacaaataatgaaagaaacgtaaaatttggggca
aaaggttatgaaagagcaaaagagatagccttagagtataaagaaattttcggagatgat
ttttatttggaaataatgagacacggtattgccgaccaactctttattgatgatatgatt
ttaaaaatttcaaaagagacggggataaaagtagttgccacaaacgacacccactatttg
gagcaaaaagatgccctagcacatgaagcttttatgtgtattgcaatgaataaactttat
gatgatccaaacagattaagacacagtgttcatgaattttatctaaaatctccggaacaa
atagcaaaactctatgcagatattcctgaagcaattgcaacaacgcaagagattgcagat
aaatgtaacttagagataaaattaggaaatcctacaccgccgaattttaaatttacaaga
caaaaacttacggaactaggacttgaaatacctgaacctgaagaagagtattcactagaa
aacgataccgctttatttgtacacgtatcaagagaaggtttggaaaaaagacttaaaata
gttccaaaagagaaacatgaggaatatagacaaaggcttcaaaaagagatagatatcata
acaggtatgaaattcccgggatatatgcttatcgtttgggatttcgtaagagctgcaaaa
gagatgaaaatccctgttggtccgggaagaggaagtgccgcaggaagtttggttgctttt
agtatggaaattaccgatatcgatcctatgccttacggacttctttttgagagatttcta
aatcctgaaagggtatcaatgccggatatcgatatggacttctgccaaagtagaaggggt
gaaattattgattatgttgtaaaacagtacggtagaaacaatgttgcccagattatcacg
ttcggtaaacttcttgcaaaaggggttataagagatgttgcaagagttcttgatatgcct
tattcaaaagcagatgctatggcaaaacttattcccgatgaacttgggattgatttaaaa
tcttcttgggaaaaagaaccgaaaataaaagagctgtatgacagtgatcctcaagcaaaa
agagtatgggattttgctttagctttagaaggtttaaatagaaatgcaggtacgcatgca
gcaggtgttgttatctcaaatgatcctttatggaaaaaaacacctttgtttaaaccctct
ggaatggaaacaatagcaacccaatataacggtaaattcgtcgaagatgtcgacttaatt
aaattcgacttcttgggacttaaaactttaacagtaattgatgaggcaaataaacttgtt
gaaaaaagacacggcaaaaaaattgattttatccaaatagatgtaaatgacaagggagtc
tacgacttagttcaatcaggagatacaatcggattattccagatagaatcggcaggaatg
caagatttgtgtaaaagattaaaaccttcaagctttgaggaccttgtcgcgatacttgct
ttgtatagaccgggacctatggagtcaggaatgcttgatgactttattgacagaaaacac
ggacgtgcaaaaattgactacttccatgatgaactcgaacctgcactaaaacctattttg
gaaaatacttacggggtaattgtttaccaagaacaggttatgcagattgtacaaagcgtc
ggtggcttttcacttggaggtgcagacttagttagacgggcaatgggtaaaaaaattaaa
gctgaaatggacagactaaaaggtgaatttgcagacggagcagagaaaaaaggttttaca
agagcttatgctgaagagcttttcgaccttattgtaaaatttgccggttatggatttaat
aaatcccactcggctgcttatgctctggttactttttatacttgttatttaaaatgctac
tatccaactgaatttatggcagctttacttactttggaaaaagataatacggacaaagtt
gttaaatatgtagatgaagtaaaaagattggatattgagttatttccgcctgatataaat
aaatccgatcttgttttctctgcaacaaaaattgatgataaagaagtagtaatgtttggt
atgggtgccattaaaggtgccggtgatgtggctattaactcaattttaaaagagagaaat
aaaaacggcattttcaaagatttagcagattttgtttcaagaatcgacgggtctaaagta
aataaaagagtaatcgaatctttggcaaaagcaggtgctttggattgttttgagtattca
agaagagcattacttgaacaaatagaactaataggtgaagccgtaggaaaagcaatgcag
ctgaaaaaacagactacatcttcacttttcggggatgataaagagatgttaacagtagat
atagatcttgaacatcttcctgaatttgaccaaaaagagatattagagtttgaaaaagcc
tctttaggattttacgtatccggtcaccctcttgattcttatagagaagagctagataaa
atctcatacacattaagttcggagcttgatgaagttgcagacggttcccaagctcttatt
ataggaaaaattgaagagataaccgaaaaaatctctaaaaaaggtaataaattcggtatt
gcaaatattcttgaccttcacggaaatatcgaagtaatgctctttgaaaacagattaaaa
gagataagagaagagtttgatatcaatgaacctattgcctttaaagtaaaagtttcaaga
gacggagattttacaagacttagtattcttaaaattgaaagcctgaaagatgcacaaaaa
gagaaagtaaaaacaaaacataaagagaaagaagagccgcctcttaccgttgctgttcct
tatatagaaaaagaggacactatgtataaactttttgatttgattgctcataatcaagga
agaagagaattaaaagttattataaaaacaaaacttgcagatatagaacttgaaacggat
tttagggtaacttcaaatatggaagagtatataaaacagattgaaggagcacatgtagta
gcatga
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