Anguilla anguilla (European eel): 118207188
Help
Entry
118207188 CDS
T07545
Name
(RefSeq) collagen alpha-1(II) chain isoform X1
KO
K19719
collagen type II alpha
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang04510
Focal adhesion
aang04512
ECM-receptor interaction
aang04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118207188
04518 Integrin signaling
118207188
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118207188
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aang00536
]
118207188
Glycosaminoglycan binding proteins [BR:
aang00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118207188
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
118207188
NCBI-ProteinID:
XP_035236415
LinkDB
All DBs
Position
11:1189429..1228339
Genome browser
AA seq
1421 aa
AA seq
DB search
MFSFVDSRTLLLLAATQVLLLAFVKCQEEDDRPLGAKGQKGEPGDITDVVGPRGPAGPMG
PPGEQGIRGDRGAKGEKGSPGPRGRDGEPGTPGNPGPPGPPGPNGPPGLGGNFAAQMAGG
IDEKAGGAQMGVMQGPMGPMGPRGPPGPSGAPGPQGFQGNPGETGEPGAAGPIGPRGPPG
PSGKAGDDGEAGKPGKSGERGPPGPQGARGFPGTPGLPGIKGHRGYPGVDGSKGESGAAG
AKGEAGAPGENGAPGPMGPRGLPGERGRPGASGAAGARGNDGLAGPAGPPGPVGPAGAPG
FPGSPGAKGEAGPTGARGPEGAQGPRGESGTPGSPGPAGAGGNPGTDGIPGSKGSAGGPG
IAGAPGFPGPRGPPGPQGATGPLGPKGQQGDPGIPGFKGEAGPKGELGPAGPLGAPGPAG
EEGKRGARGEPGAAGPNGPPGERGAPGNRGFPGQDGLAGPKGAPGERGVAGVGGPKGANG
DPGRTGEPGLPGARGLTGRPGDAGPQGKVGPTGAAGEDGRPGPPGPQGARGQPGVMGFPG
PKGANGEAGKAGEKGLVGAPGLRGLSGKDGETGAGGPPGPAGPAGERGEQGQPGPSGFQG
LPGPPGPPGEGGKPGDQGVPGEGGAAGAVGPRGERGFPGERGGAGPQGLQGPRGLPGTPG
TDGPKGAIGPGGSPGAQGPPGLQGMPGERGASGISGPKGDRGDNGEKGPEGAPGKDGSRG
LTGPIGPPGPAGPNGLKGESGPSGPTGAAGARGAPGDRGETGPPGPAGFAGPPGADGQPG
AKGELGEGGQKGDAGAPGPQGPSGAPGPQGPTGVIGPKGARGAQGAPGATGFPGAAGRVG
PPGPNGNPGAAGPAGPAGKDGPKGVRGDGGPPGRQGDAGLRGAAGAPGEKGEPGEDGPSG
PDGPSGPQGLAGSRGIVGLPGQRGERGFPGLPGPSGEPGKQGGPGGAGDRGPPGPVGPPG
LTGPSGEPGREGTPGSDGPPGRDGATGIKGDRGNTGPAGAPGAPGAPGGPGPVGPTGKQG
DRGESGAQGPSGPPGPAGARGMAGPQGPRGDKGEAGETGERGQKGHRGFTGLQGLPGPPG
SPGDQGAAGPAGPSGAKGPPGPVGPGGKDGANGIPGPLGPPGPRGRSGETGPSGPPGNPG
PPGPPGPPGPGIDMSAFAGLSQPEKSPDPLRYMRADQASGNLRQHDAEVDATLKSLNSQI
ENIRSPEGSKKNPARTCRDLKLCHPEWKSGEYWIDPNQGCTVDAIKVFCNMETGETCVHP
RPASIPRKNWWSSKGKERKHIYFGETMNGGYSFSYGDDSMAPNTASIQMTFLRLLSTEGS
QSLTYHCRNSVAYMDQASGNLKKALLLQGSNDVELRAEGSSRFTYSVLEDGCTKHTGQWG
KTVIEYKTQKTSRLPIVDIAPLDIGGADQEFGVDIGPVCFL
NT seq
4266 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgtggattccaggacgcttctgctactcgcagcaacgcaagtcctttta
ttagcctttgtcaaatgccaggaagaggatgaccgaccacttggtgctaagggacagaaa
ggagagccaggagacatcacagacgtcgtaggaccacgtggaccagcaggccccatgggc
cccccaggagagcagggcattcgcggagacagaggtgcaaagggggagaagggaagtcct
ggcccccgaggaagagatggagagcccggtacccctggaaaccccggaccccccggaccc
ccaggacccaacggaccgccaggacttggaggaaactttgctgcacagatggcgggtgga
atcgacgagaaggctggaggcgcacagatgggggtgatgcagggaccgatgggccctatg
ggtccccgtggtccacctggccccagcggagcacctggtccacaaggtttccaaggcaac
cccggggagaccggagaacctggcgcagctggccccatcggcccccgcggcccccccgga
ccctctggaaaagccggagatgatggtgaagctggaaagccaggtaaaagcggagagcga
ggaccacctgggcctcagggcgcgcgcggtttccccgggacacccggacttcctgggatc
aagggacacaggggctacccaggtgtggatggatcgaagggagagtctggagctgcagga
gctaagggcgaggcaggtgctcccggtgagaacggcgcccccggaccaatgggtccacga
ggtctgcctggtgagagaggtcgtcctggagcctcaggagccgctggtgctcgtggaaat
gatggtttggctggccctgctggtcctcccggacctgttggacctgctggggctcctggt
ttcccaggttctccaggtgctaagggtgaggcaggtcccacaggagctcgtgggcctgaa
ggtgcacaaggaccccgaggagagtctggaacccctggatccccaggcccggccggtgct
gggggtaaccctggtactgacggcattcctggatccaaaggatctgcgggcggtcctggt
attgcaggtgctcctggtttccccggtccccggggcccccccggacctcagggagccaca
ggccctctggggcccaaaggacagcagggcgaccccggtatcccagggttcaaaggtgaa
gctggacccaaaggagagcttggccctgcaggtcccctgggagccccagggccagcggga
gaggaggggaagcgaggagccagaggagagcctggcgctgccgggccgaacggacctccc
ggcgagaggggcgctcccggtaaccgtggtttcccaggtcaggatgggctggctggtcct
aagggtgcccctggtgagcgaggggttgcaggtgttggaggacccaagggagccaacgga
gacccaggtcgtactggggagccaggcctgccaggtgctaggggtcttactggtcgccct
ggtgacgctggtcctcaaggcaaagttggtcctactggcgctgctggtgaagacggccgc
cccggaccacctggtccccagggagcccgcgggcagcctggagtcatgggattcccagga
cctaagggagccaacggagaggctgggaaagctggagagaagggacttgtgggagcacca
ggcctgaggggtctgtcaggtaaagatggagaaactggagcgggcggacctcctgggcca
gctggacctgcaggagagagaggggaacagggccagcctggtccctctggattccagggt
ctacctggacctccaggccccccaggtgaaggaggaaagcctggtgaccagggtgtccca
ggagagggtggtgccgctggtgctgttggacccagaggcgagcgaggtttccccggagag
agaggtggcgctggaccccaaggccttcagggaccacgtggtctccctgggactccaggg
accgacggacccaagggtgccatcgggccaggtggtagcccaggggcgcaggggcccccc
ggtctgcagggcatgcccggggagaggggcgcctccggaatctcaggacccaagggcgac
agaggcgacaacggcgagaaaggacctgagggagcgcctgggaaggacggttcaagaggt
ttgacaggtcccattggccctccgggtccagctggtcctaatggactgaagggtgaatct
ggaccttcaggcccaactggtgctgctggtgcacgtggagctcctggcgaccgcggtgag
accggaccccccgggcctgctgggttcgctggaccccctggtgctgacgggcagccggga
gccaagggcgagctcggagagggaggacagaaaggagacgctggagcacctggcccccag
gggccctccggagcccccggtccacagggccccaccggcgtcatcggacccaaaggcgca
cgcggtgctcaaggcgctcccggtgccactggtttcccaggtgctgctggcagagtcgga
cctcccggccccaacggtaaccccggtgctgcaggccctgctggtcctgcggggaaggat
gggcctaaaggagtgcgtggagacggcggtcctcctggtcgccagggagacgctggactg
cgtggggctgccggagccccaggagagaagggagagccaggcgaggatggaccctcaggt
ccagacggcccctcaggacctcagggtttggccggatctcgcggtattgtgggcctgccg
ggacagcgtggagagagggggttccctggccttccgggaccttctggtgaaccaggcaaa
cagggaggtccaggtggggcgggcgaccgaggaccccctgggcctgtggggccccctggc
ctgactggaccatcaggggaacctggcagagagggcacccctggatccgatggacctcct
ggcagagatggagctactgggatcaagggcgaccgtggtaacacaggacctgctggggct
ccaggagctccgggggcccctgggggcccgggacccgtaggccccaccggcaaacaggga
gacagaggagagtctggcgctcaaggaccctcagggcctccaggtcccgctggagccaga
ggcatggctggacctcaagggccacgtggagacaagggtgaggcgggcgagacaggcgag
cgagggcagaagggtcatcggggtttcactggcctgcagggtctgccaggacctcccggt
tcccctggtgaccagggtgctgctggacctgccggccccagtggagcaaaggggccccct
gggccagtgggccccggtgggaaggacggtgcgaacggcattcctggaccccttggacct
cccgggcctcgcggtcgctctggagaaactggaccttctggtcctcctggtaaccccggc
ccccctggaccgcctggccccccaggccccgggatcgacatgtcggccttcgctggcctg
tcccagccggagaagtccccggaccccctgcgctacatgagggccgaccaggcttccgga
aacctccgccagcacgacgccgaggtggacgccaccctcaagtccctcaacagccagatc
gagaacatccgcagccccgagggctccaagaagaaccccgcccgcacctgcagggacctc
aaactctgccatcccgagtggaagagcggtgaatactggatcgatccgaaccagggctgc
acagttgatgccatcaaggtcttctgcaacatggagactggagagacctgcgtgcacccc
aggcccgctagcatcccgcgcaagaactggtggtccagcaagggcaaggagcgcaagcac
atctatttcggggagactatgaacggaggctacagcttcagctacggcgatgacagcatg
gctcccaacacggccagtattcagatgaccttcctccgcctgctgtccacggagggctcc
cagagcctcacctaccactgccgcaacagcgtggcctacatggaccaggccagcggcaac
ctgaagaaggccctgctgctgcagggctccaacgacgtggagctgcgcgccgagggcagc
agccgcttcacctacagcgtgctggaggacggctgcacgaagcacacgggccagtgggga
aagacggtgatcgagtacaaaacgcagaagacgtcccgcctccccatcgtggacattgca
cctctggacatcggaggggcggaccaggagttcggcgtggacatcggccccgtctgcttc
ttgtaa
DBGET
integrated database retrieval system
