Anguilla anguilla (European eel): 118208892
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Entry
118208892 CDS
T07545
Symbol
ddx6
Name
(RefSeq) probable ATP-dependent RNA helicase ddx6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118208892 (ddx6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aang03019
]
118208892 (ddx6)
03036 Chromosome and associated proteins [BR:
aang03036
]
118208892 (ddx6)
Enzymes [BR:
aang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118208892 (ddx6)
Messenger RNA biogenesis [BR:
aang03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
118208892 (ddx6)
mRNA degradation factors
5'-3' decay
Decapping complex
118208892 (ddx6)
Chromosome and associated proteins [BR:
aang03036
]
Eukaryotic type
Gene silencing
piRNA pathway
118208892 (ddx6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
AAA_22
NA-iREase2
AAA
Motif
Other DBs
NCBI-GeneID:
118208892
NCBI-ProteinID:
XP_035239749
LinkDB
All DBs
Position
12:39477889..39491645
Genome browser
AA seq
484 aa
AA seq
DB search
MSTARTENPVILGLANQNGQIRGPLKPATAPPGGVGGSPQPQQTGQLNASSTINNGGSQP
LPMANTIKVGDDWKKNLKLPPKDMRMRTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKP
SPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERIDLKKDCIQAVGIVPTRELALQ
VSQICIQVSRHMGGVKVMATTGGTNLRDDIMRLDETVHVIIATPGRILDLIKKGVAKVDK
VQMIVLDEADKLLSQDFLQMMEEMLSFLPKQRQILLYSATFPLSVQKFMNAHLQKPYEIN
LMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGY
SCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLGETYL
HRIGRSGRFGHLGLAINLITYEDRFNLKGIEEQLGTEIKPIPGSIDKSLYVAEYHSENAE
EGKL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggcgagaacggagaacccggttatcctgggattagccaatcagaatggccag
attcgggggcctttgaaacctgcgacggccccccctgggggggtggggggcagtccccag
cctcagcagaccggccagctgaacgcctccagcacaatcaacaatggcggatcccaaccc
ctccccatggccaacaccatcaaggttggcgatgactggaagaagaatttaaagcttccg
ccgaaggacatgcggatgaggacttcggatgtgaccgcgaccaagggcaacgagttcgag
gactactgcctgaagagggagctgctgatggggatcttcgagatgggctgggagaagccg
tcccccatccaggaggagagtatccccattgctttgtctggaagggacattttggccagg
gccaagaatgggactggcaagagtggtgcctacctcatccccttacttgaacgaattgac
ctgaagaaggactgcatacaagctgtgggcattgtgcccaccagagaactggctctgcag
gtgagccagatctgcatccaggtcagcagacacatgggcggggtcaaagtcatggcaacc
acgggggggaccaacctccgtgatgacatcatgaggctggacgagacggtgcacgtcatc
atcgccactcctggaaggattctggacctcatcaaaaagggcgtggccaaagttgataaa
gtgcagatgattgtactagatgaggccgataagctcctgtcccaggacttcctgcagatg
atggaggagatgctgagcttcctgcccaaacagaggcagatcctgctctactcggccacc
ttccccctcagcgtgcagaagttcatgaatgcgcacctgcagaagccctatgagatcaac
ctgatggaggagctcacgctgaagggtgtgacccagtattacgcctacgtgactgagaga
cagaaggtccactgccttaacacgctcttctccaggctccagattaatcagtccataatc
ttctgcaactcttcccaacgcgtggagctgctggccaagaagatctcccagctgggctac
tcctgcttctacatccacgccaagatgagacaggagcatcgtaaccgagtgttccatgac
ttcagaaacggtctgtgccgaaatctggtctgcactgatctcttcaccagaggaatcgat
atccaagctgtgaatgtggtgatcaactttgacttccccaaactgggagagacgtacctg
caccgtatcggacgatctgggcgtttcgggcacctgggcctggccatcaacctgatcacc
tacgaggaccgcttcaacctgaagggcatcgaggagcagctgggcaccgagatcaagccc
atccccggcagcatcgacaagagcctgtacgtggcagagtaccacagcgagaacgccgaa
gagggcaagctgtga
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