Anguilla anguilla (European eel): 118209075
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Entry
118209075 CDS
T07545
Symbol
prpf8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118209075 (prpf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aang03041
]
118209075 (prpf8)
Spliceosome [BR:
aang03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
118209075 (prpf8)
Complex C
U5 SnRNP specific factors
118209075 (prpf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
118209075
NCBI-ProteinID:
XP_035240099
LinkDB
All DBs
Position
12:complement(8091201..8116143)
Genome browser
AA seq
2338 aa
AA seq
DB search
MAAAFPYRGVPGSMPTGIPTPGQIPDYMSEEKLQEKARKWQQLQAKRYSEKRKFGFVDAQ
KEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVP
VLYHITGAISFVNEIPWVIEPVYIAQWGAMWIMMRREKRDRRHFKRMRFPPFDDEEPPLD
YADNILDVEPLEAIQMELDPEEDGSVVDWMYEHQPLRDNTKYVNGTTYRRWQFTLPMMST
LYRLANQLLTDLVDYNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFN
DINKIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLIN
PISHRHSVKSQEPLPDDDEEFELPEYVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGR
TRRAIDIPLIKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFK
ATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKK
SRFGNAFHLCREVLRLSKLVVDSHVQYRLGNVDAFQLSDGLQYIFAHVGQLTGMYRYKYK
LMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLA
RQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSESW
RCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLG
RLTRLYLKAEQERQHNYLKDGPYITAEEAVAIYTTTVHWLESRRFSPIPFPPLSYKHDTK
LLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIE
FMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQ
GINNLQDVWETTEGECNVMLESRYEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVI
NYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDI
ATEGAHPIRLYCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRD
ARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRIL
PKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFT
KIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFY
TPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWES
EFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWR
VRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPT
WEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDL
TGIFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPR
KSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIE
RYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSGYGNWFPGGKPLIQQAMAKIMKAN
PALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGN
LTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQ
PKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLF
NLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWI
KVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQS
QLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDI
KETGYTYILPKNVLKKFICISDLRAQIAGYLYGTSPPDNPQVKEIRCIVMVPQWGTHQTV
HLPNQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTIIITCS
FTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPGQV
SWNYNFMGVRHDPNMKYDLQLSNPKEFYHEVHRPSHFLNFASLQEGEIYNADREDMYA
NT seq
7017 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgcgtttccatacagaggagtacccggcagcatgccgacgggcatcccgact
ccggggcagattcccgactacatgtcggaggagaagctgcaggagaaagcacgaaaatgg
cagcagctgcaggccaagcgctactcggagaagcgcaagttcggcttcgtggacgcgcag
aaggaggacatgccgccggagcacgtccgcaaaatcatcagggaccacggcgacatgacg
aacaggaagttccgccacgacaagagggtctatctcggtgctctgaagtacatgccccat
gcggtgctgaagctgctggagaacatgcccatgccctgggagcagatcagggacgtgccc
gtgctctaccacatcaccggcgccatctccttcgtcaacgagatcccctgggtgatcgag
cccgtctacatcgcccagtggggggccatgtggatcatgatgcggcgcgagaagagggac
cggcggcacttcaagcgcatgcgcttcccgccgttcgacgacgaggagccgccgctggac
tacgccgacaacatcctggacgtggagccgctggaggccatccagatggagctggacccc
gaggaggacggctcggtggtggactggatgtacgagcaccagccgctccgcgacaacacc
aagtatgtgaacggcaccacctacaggcgctggcagttcactctgcccatgatgtccacg
ctctaccgcctggccaaccagctgctcaccgacctggtcgactacaattacttctacctg
ttcgacctgaaggccttcttcacctccaaggccctgaacatggccatccctggagggccc
aagttcgaacccttggtcagagacatcaacctgcaggatgaagactggaatgagttcaat
gacatcaacaagatcatcatcaggcagccaatcaggacggagtacaaaattgccttcccg
tacctgtacaacaaccttccgcaccacgtccacctcacctggtaccacacccctaatgtg
gtcttcattaagacggaggatccagatctccccgcgttttactttgaccccctgatcaac
cccatctctcaccggcactctgtcaagagccaggagcccctgccagacgacgatgaggag
tttgagctgccggagtacgtggagcccttcctgaaggacacgcccctctacaccgacaac
acggccaatgggatcgctctgctctgggcgccccgccccttcaacctgcgatcggggaga
acccgtcgggccattgacatcccgctcatcaagaactggtaccgcgagcactgccctgca
ggccagccggtgaaggtgcgcgtctcctatcagaagctgctcaagtactacgtgctcaac
gccctcaaacacagaccccccaaagcccagaagaagcggtacctcttccgctccttcaag
gccaccaagttcttccagtcgacgaagctggactgggtggaggtggggctgcaggtgtgc
aggcagggctacaacatgctcaacctgctcatccacaggaagaacctcaactacctgcac
ctggactacaacttcaacctcaagcccgtcaagaccctcaccaccaaggaacgtaagaag
tctcgtttcgggaacgcgttccatctctgccgcgaggtgcttcgcctcagcaagctggtg
gtggacagccacgtgcagtacaggctggggaacgtcgacgccttccagctgtccgacggg
ctgcagtacatctttgcgcacgtgggtcagctgaccgggatgtaccgctacaagtacaag
ctgatgagacagatccgcatgtgcaaggacctgaaacacctcatctactaccgcttcaac
acggggccagtggggaagggccccgggtgcggcttctgggcccccgggtggcgggtgtgg
ctgttcttcatgaggggcatcaccccactgctggagcgctggctggggaacctgctggcc
aggcagttcgaaggtcgacactcgaagggcgtggccaagacggtcaccaagcagcgggtg
gagtcgcacttcgacctggagctgcgcgcggccgtcatgcacgacatcctggacatgatg
cccgagggcatcaagcagaacaaggcccgcaccatcctgcagcacctcagcgagtcctgg
aggtgctggaaggccaacatcccctggaaggttcctgggcttcccacgcccatcgagaac
atgatcctccgctacgtgaaggccaaagccgattggtggacgaacacggcccactataac
cgcgagcgaatcaggcgcggcgccaccgtggacaagacggtctgcaagaagaacctgggc
cgcctgacccgcctctacctgaaggccgagcaggagaggcagcacaactacctgaaggac
ggcccctacatcacggcggaggaggcggtggccatctacaccaccacggtgcactggctg
gagagccggcgcttctcccccatccccttccccccgctgtcctacaagcacgacaccaag
ctgctcatcctggccctggagcgcctcaaagaggcctacagtgtgaagtccaggctgaac
caatcgcagcgcgaggagctgggtctgatcgagcaggcctacgacaacccccacgaggcg
ctgtccaggatcaagcgtcacctgctgacccagcgcgccttcaaagaggtgggcatcgag
ttcatggacctgtacagccacctggtgcccgtgtacgacgtggagccgctggagaagatc
acggacgcctacctggaccagtacctgtggtacgaggccgacaagcgcaggctgttcccc
ccctggatcaagccggccgacaccgagccccctcccctgctggtgtacaagtggtgtcaa
gggatcaacaacctgcaggacgtctgggagacgacggagggcgagtgcaacgtcatgctg
gagtcgcgctacgagaagatgtacgagaagatcgacctgacgctgctcaacaggctgctc
cgcctcatcgtggaccacaacatcgccgactacatgaccgccaagaacaacgtggtcatc
aactacaaggacatgaaccacaccaactcgtacgggataatccgggggctgcagttcgcc
tccttcatcgtgcagtactacgggctggtgatggacctgctggtcctggggctgcaccgc
gccagcgagatggcgggaccgccccagatgcccaacgacttcctcagcttccaggacatc
gccacggagggcgcccaccccatccggctgtactgccgctacatcgaccgcatccacatc
ttcttcaggtttacagccgacgaggcccgagacctgatccagaggtacctgactgagcac
ccggaccccaacaacgagaacatcgtgggctacaacaacaaaaagtgctggcccagagat
gccaggatgaggctgatgaagcacgatgttaacctcggccgcgccgtcttctgggacatc
aagaaccgtctgccccgctcggtgaccacggtgcagtgggagaacagcttcgtctccgtc
tacagcaaggacaaccccaacctgctcttcaacatgtgcggcttcgagtgccgcatcctg
cccaagtgccgcaccagctacgaggagttcacgcacaaggacggcgtgtggaacctgcag
aacgaggtgacgaaggagcgcacggcgcagtgcttcctccgggtggacgacgagtccatg
cagaggttccacaaccgcgtccgacagatcctcatggcctccggctccaccaccttcacc
aagatcgtgaataagtggaacacggccctcatcggcctgatgacgtacttccgcgaggcg
gtggtgaacacgcaggagctgctggacctgctggtcaagtgcgagaacaagatccagacg
cgcatcaagatcggcctcaactccaagatgcccagccgcttcccccccgtggtgttctac
acccccaaggagctgggcgggctgggcatgctgtccatggggcacgtcctcatcccccag
tccgacctgaggtggtcgaagcagacggacgtgggaatcacgcacttccgctcgggcatg
agccacgaggaggaccagctgatccccaacctgtaccgctacatccagccctgggagagc
gagttcatcgactcgcagagggtctgggccgagtacgccctcaagaggcaggaggccatc
gcccagaaccggcgtttgaccctggaagacttggaggactcctgggacaggggcatccct
cgaatcaacaccctcttccagaaggaccggcacaccctggcctacgacaagggctggagg
gtcaggaccgacttcaagcagtatcaggttctgaagcagaacccgttctggtggacgcac
cagaggcatgatgggaaactgtggaacctgaataactaccgcacggacatgatccaggcg
ctgggcggcgtggagggcatcctggagcacacgctcttcaaggggacctacttccccacc
tgggagggtctcttctgggagaaggccagtggcttcgaggagtccatgaagtggaagaaa
ctgaccaacgctcagaggtccggtctgaaccagatccccaatcgacgattcaccctctgg
tggtcccccaccatcaaccgagcaaacgtgtacgtgggcttccaggtgcagctggatctg
accgggatcttcatgcacggaaagatccccaccctcaagatctccctcatccagatcttc
agagcccacttgtggcagaagatccatgagagcatagtcatggacctgtgtcaggtgttt
gatcaggagctggacgctctggagatagagacggtgcagaaggagaccatccaccccagg
aagtcctacaagatgaactcgtcctgtgcggacatcttgctcttcgcttcctacaagtgg
aacgtgtctcgcccctccctgttggctgattccaaggacgtgatggacagcaccaccacc
cagaagtactggatcgacatccagctgcgatggggagactacgactcgcacgatatcgag
cgctacgcccgcgctaagttcctggactacaccaccgacaacatgagcatctacccgtca
cccactggggtcctgattgccatcgatctggcctacaacctgcacagtggctacggtaac
tggttccccggcggcaagccgctgatccagcaggccatggcgaagatcatgaaggccaac
ccggcgctgtacgtgctgcgggagcgcatccgcaagggcctgcagctgtactcctccgag
cccaccgagccctacctgtcctcgcagaactacggcgagctcttctccaaccagatcatc
tggttcgtcgacgacaccaacgtgtaccgggtcaccatccacaaaacgttcgagggtaac
ctgaccaccaagcccatcaacggggccattttcatcttcaacccccgaaccgggcagctc
ttcctcaagatcatccacacctctgtgtgggcggggcagaaacgtctgggacagttggcc
aagtggaagacggccgaggaggtggcagccctgattcgctcgctgcccgtggaggagcag
cccaaacagatcatcgtcacccggaagggcatgctggacccgctggaggtccacttgctg
gatttccccaacatcgtcatcaagggctcggagctgcagctgcccttccaggcgtgtctg
aaggtggagaagttcggggacctcattctgaaggccaccgagccgcagatggtcctcttc
aacctgtacgacgactggctcaagaccatctcgtcctacacggccttctcccgtctcatc
ctgatcctcagggcgctccacgtgaacaacgaccgcgccaaagtcatcctgaagccggac
aagaccaccatcacggagccgcaccacatctggcccacgctgaccgacgaggagtggatc
aaggtggaggtgcagctcaaggacctcatcctggccgactacggcaagaagaacaacgtg
aacgtggcgtctctgacgcagtcggagatccgtgacatcatcctgggcatggagatctcc
gccccctcgcagcagaggcagcagatcgccgagatcgagaagcagaccaaggagcagtcg
cagctgaccgccacgcagacgcgcaccgtcaacaagcacggcgacgagatcatcacctcc
accaccagcaactacgagacccagaccttctcctccaagaccgagtggagagtcagggcc
atctctgcggccaacctccacctccgcaccaaccacatctacgtctcctcggacgacatc
aaggagacgggctacacctacatccttcccaagaacgtcttgaagaagttcatctgcatc
tctgacctgcgcgcacagattgcgggatacctgtacgggacaagcccccccgataacccc
caggtgaaggagatccgctgcatcgtcatggtgccccagtgggggacgcaccagaccgtg
cacctgcccaatcagctgccccagcacgagtacctgaaggaaatggagccgctggggtgg
atccacacgcagcccaacgagtcgcctcagctctccccgcaggacgtcaccacgcatgcc
aaggtcatggccgacaacccgtcgtgggacggagagaagaccatcatcatcacctgcagc
ttcacccctggctcctgcaccctgaccgcctacaagctgacccccagcgggtacgagtgg
ggcaggcagaacacggacaagggcaacaaccccaagggctacctgccgtcgcactacgag
cgcgtgcagatgcttctgtccgaccgcttcctgggcttcttcatggtgcctgggcaggtg
tcctggaactacaacttcatgggtgtccggcacgatccaaacatgaagtacgacttgcag
ctgtccaacccgaaggagttctaccacgaggtccaccgaccctcgcacttcctcaacttc
gcatccctgcaggagggcgagatctacaacgcagaccgcgaggacatgtacgcctag
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integrated database retrieval system
