Anguilla anguilla (European eel): 118209569
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Entry
118209569 CDS
T07545
Symbol
scaf8
Name
(RefSeq) SR-related and CTD-associated factor 8
KO
K13191
RNA-binding protein 16
Organism
aang
Anguilla anguilla (European eel)
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aang03021
]
118209569 (scaf8)
03041 Spliceosome [BR:
aang03041
]
118209569 (scaf8)
Transcription machinery [BR:
aang03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
118209569 (scaf8)
Spliceosome [BR:
aang03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
118209569 (scaf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
HEPPP_synt_1
DUF3525
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
118209569
NCBI-ProteinID:
XP_035240903
LinkDB
All DBs
Position
1:25180147..25220966
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AA seq
1214 aa
AA seq
DB search
MEAVKAFNGELYSLNEYKPPISKAKMTQITKSAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVVDSIVRQSRHQFGQEKDVFAPRFSKNIIATFQNLYRCPSDDKSKIVRVLNLWQKN
NVFKSDIIQPLLDMAAGLPPPSLTPVTASSAAPVNSTTPGTPTTPATPANMVQSLPDWAS
QISNTDTVAAVAQILQSPQGQQLQQLVQSLQLQQQKPQPSLLQALDAGLVVQLQALTAQL
TAAATANTLNPLEQRVSSFNKKLLGQFDFGSDSERSESSKKDTPSSQLPMVSDSINSSIF
HQLAEQLQQQNLEQFQKQFLEHQQQQQQQQQQQQQQQQQQKAMSTDGQEAIFGSESSATP
SQSRAQQHQEVETKMDDSIDNQQQDMDLDEGQDTVDEDMFEAEEKKTGSTRSRTRSRSRS
RSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIR
SKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYIGMVHRQDAYRA
RQKLSSGSFKIGSKVIKIAWALNIGVKQEYKQFWDVDLGVTYIPWEKVKLDDLAGFVEGG
MIDQETVNSEWEAARNAEPPKETPAQPASAEPSSLGSAQTEAFTQPVTMMPVQIPVAQGV
PAVGLIPPSFPVTMAMPPPGFGPPPPFLRAGFNTSQPPPGFMPPSVVPQTSVGSGVPSVP
TSLMQSSMSGAQEAPKSSPFGAMIPPVSTIPGSYIPQGVFNPVGTQPQLPADNKAGQPAE
SLDAAAELTLQGMQNAVRSGMGLLGMHPSASLTHPLHHPNLGGQRMPGLLPVEARPSLLQ
GAGGRFPLLMPNRLLHPNNSLAPNPALNPAQPAPPRAPAPSPYSEPDQFGRAQGVFGQPP
AQPSDGPAQPEARSPGRSDGVPQERDQDYRFPPPEKQGTGLLPTPPPENRQMREGPQGDG
GESQGRKEPLASFKHESRWGPPRGDFDERDLRGVPAGGPKGFQEERPGPRPNFTNRFENR
GGGGGGGGGGGGGGGGGGGGGGGGGGGPAWSRGGRPGEADLHQDFDDRRRPWDRQRDRDD
RDFDFRREMNGSRHGRDRERDRDRGRERNRERDRERDWDRDRDRERDQGRDRNRQAWAPP
APAPALAPAPSPPQAPSVPEKPADGPEQEKPQCVNGAGSNSAPAAPEPPEATPAAEEPRN
NLEKHASPKDGYGP
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgttaaagcatttaatggcgagctttactccttgaacgaatacaagccccca
atatccaaagcaaagatgacccagataacaaagtctgccataaaagccataaagttctac
aagcatgtcgtgcagagtgtggagaagttcattcagaaatgcaagccagagtacaaggtc
cccgggctctacgtggtcgactccatcgtgcgccagtcgcggcaccagttcggccaggag
aaggacgtgttcgcgccgcgcttcagcaagaacatcatcgccaccttccagaacctctac
cgctgcccttccgacgacaagagcaagatcgtgagggtcctcaacctctggcagaagaac
aacgtcttcaagagcgacataatccagcccctcctggacatggccgccgggctgccgccc
cccagcctgacccccgtcaccgccagcagcgccgcgcccgtcaacagcaccacccccgga
acccctacaacccccgccaccccagccaacatggtgcagagcctgcctgactgggcctca
cagatctccaacacggacaccgtggctgctgtggcccagatcctgcagagcccgcagggc
cagcagctgcagcagctggtgcagagcctgcagctccagcagcagaagccccagccctcc
ctgttgcaggctctggacgccggcctggtggtccagctgcaggccctcactgcccagctc
accgccgccgccaccgccaacacgctcaaccccctggagcagagggtgtcctccttcaac
aagaagctgttgggacagtttgattttgggagcgattctgaacgcagcgagagttccaaa
aaggacacgccgtcatcccagctgcccatggtctcagactccatcaacagctccattttc
caccagctggccgagcagctacagcagcagaacctggagcagttccagaagcagttcctg
gaacaccaacagcagcaacagcaacaacaacagcagcagcagcagcagcagcagcaacag
aaggcgatgtccacggacggccaggaggcaatcttcggttccgagagctcggccacgccc
tctcagagccgcgcccagcagcaccaagaggtcgagaccaagatggacgactccatcgac
aaccaacagcaggacatggatctggacgaaggccaggacacggtggacgaggacatgttc
gaggccgaggagaagaagaccggcagcaccaggtccaggacgcgttccaggtcccggtcc
aggtcccccaggaaacgacggtcacggtcgcggtcgggttcgcggaagcgcaagcaccgg
aagcgctcgcggtcacggtcccgggagcggaaaagaaagtcgtcgcggtcgtactccagc
gagcggcgggctcgcgagcgcgagaaagagcggcagaagaaagggctgccgcccatccgc
tccaaaactctgagcgtttgcagcactactctctgggtgggacaagtcgacaaaaaggcc
acacagcaagatctcaccaacctctttgaagaatttgggcagattgaatccatcaatatg
atcccccccaggggctgcgcctacatcggcatggtgcacagacaggacgcctaccgcgcc
cggcagaagctcagcagcggctccttcaagatcggctccaaagtcatcaagattgcctgg
gccctgaatattggggtgaagcaggagtacaagcagttctgggacgtggacttgggggtg
acctacataccctgggagaaggtcaagctggacgacctggctggttttgttgaggggggc
atgatcgaccaggagacggtcaacagtgagtgggaagctgcgcggaatgctgagccgccc
aaagagacgccggcccagccggccagcgcagagcccagcagccttggcagcgcccagacg
gaggccttcacccagcccgtcaccatgatgcccgtacagatcccggtggcacagggtgtc
ccggccgtggggctcatcccgccctctttcccggtcaccatggcgatgccgccgcccggt
ttcggccctccgccgcctttcctgcgggccggtttcaacacctcccagccccctcccggt
ttcatgccaccttctgtagttcctcagacgtccgtgggatctggcgtcccctcagtacca
acatccctgatgcagtcctccatgtcgggggcgcaggaggccccgaaaagctcgcccttc
ggagccatgatcccccccgtcagcaccatccctgggagctacatcccccagggcgtcttc
aatcccgtgggaacccagccccagctgcctgccgacaataaggcgggccagcccgcggaa
agcctggacgccgccgcggaattaacactacaaggcatgcagaacgccgtgcggagcggt
atgggcctgctgggcatgcacccttcggcgtccctcacccacccgctgcaccaccccaac
ctcggcggccagaggatgccgggcctgctgcccgtggaggcccgtcccagcctgctgcag
ggggccggcggccgcttccccctcctcatgcccaatagactgctgcaccccaacaacagc
ctggcccccaaccccgccctcaaccccgcccagcccgctcccccccgcgcccctgcccct
tccccctactccgagccggaccagttcggcagggctcagggggtgttcgggcagcccccc
gcccagccttccgacggccccgcccagcccgaagcccggtcccccgggaggagcgacggc
gtcccgcaggagagggaccaggactaccgcttcccgccgcccgagaagcaggggacgggg
ctgctgccgaccccgcccccggagaacagacagatgagggagggtccccagggcgatggc
ggggagagccagggcaggaaggagccgctcgccagcttcaaacacgagagccgctggggc
ccgcccaggggggatttcgacgagcgggacctgaggggcgtgcccgcggggggccccaag
ggctttcaagaggagcggccaggtcccagaccaaacttcactaatcgttttgagaatcga
ggaggaggaggtggaggtggtggtggaggaggaggaggaggaggaggaggtggaggagga
ggcggcggtggtggtggtggtcctgcctggagtcgcggtggccggcctggggaggcggac
ctgcaccaggactttgatgaccggcggcggccctgggaccgccagagggaccgcgacgac
cgggacttcgacttccggagggagatgaacggcagccgccacggacgggacagggagagg
gaccgcgaccgcgggcgcgagagaaaccgcgagcgcgaccgggaacgagattgggaccgc
gacagagaccgcgaaagggatcaggggcgcgaccgcaaccgccaggcctgggctcctccc
gcccctgcccctgccctggcccccgccccctcccctccccaggcgccctccgttccggaa
aagcctgccgacggcccggagcaggagaagccgcagtgtgtcaacggggcggggtctaac
agcgccccggcggccccagaaccgcccgaggccacgcctgccgccgaggagccccggaac
aatctggaaaagcacgcctcccctaaggatgggtacggcccgtga
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