Anguilla anguilla (European eel): 118210006
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Entry
118210006 CDS
T07545
Symbol
supt5h
Name
(RefSeq) transcription elongation factor SPT5 isoform X1
KO
K15172
transcription elongation factor SPT5
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
118210006 (supt5h)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aang03021
]
118210006 (supt5h)
03019 Messenger RNA biogenesis [BR:
aang03019
]
118210006 (supt5h)
Transcription machinery [BR:
aang03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
118210006 (supt5h)
RNA polymerase I system
118210006 (supt5h)
Messenger RNA biogenesis [BR:
aang03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
118210006 (supt5h)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW1_SPT5
KOW4_SPT5
KOW
KOW2_Spt5
KOW5_SPT5
KOW7_SPT5
Spt5-NGN
KOW6_SPT5
KOWx_SPT5
Spt5_N
GPKOW_C
DUF3912
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
118210006
NCBI-ProteinID:
XP_035241691
LinkDB
All DBs
Position
12
Genome browser
AA seq
1085 aa
AA seq
DB search
MSDSEDSDFSDNQSDRSSEAEEVEENEEEEGQGSVAGSDKGDEDADDVEEDEEEYDEEEE
EDDDDRPRKKPRHGGFILDEADVDDEYEDEDSWEEGAEDILEKVNEEAEVSNIDHVVLDE
DHSGSRRLQNLWRDSREEALGEYYMRKYAKSSGGEHFYGGSEELSDDITQQQLLPGVKDP
NLWTVKCKIGEERATAIALMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVESYKQTHVKA
AIEGVGNLRMGFWNQQMVPIKEMTDVLKVVKEVTNLKPKSWVRLKRGLYKDDIAQVDYVE
PSQNTISLKMIPRIDLDRIKARMSLKDWFAKRKKFKRPAQRLFDAEKIRSLGGEVSHDGD
FMIFEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTETSGKERE
HSLQAGDNVEVCEGELINLQGKILSVEGNKITIMPKHEDLKDPLEFPAHELRKYFKMGDH
VKVIAGRYEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDAGGQHEWG
ELVQLDPQTVGVIVRLERETFQVLNMHGKVLTVRHQAVNRRKDNRFAVALDSEQNNIHVK
DIVKVIDGPHSGREGEIRHLFRGFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNF
TVGGFAPMSPRISSPMHPGGGGQQQRGGGGGGMGRGRGRRDNDLIGQTVRISQGPYKGYI
GVVKDATESTARVELHSTCQTISVDRQRLTTVGAKRHGGMTSIHGRTPMYGSQTPMYGTG
SRTPMYGSQTPIHDGSRTPHYGSQTPLHDGSRTPGQSGAWDPNNPNTPSRAEEEFEFGYD
DEPSPSPQGYGGTPNPQTPGYPEVPSPQVNPQYNPQTPGTPAMYNTDQYSPYAAPSPQGS
YQPSPSPQSYHQVAPSPVGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSPG
GYNPHTPGSNIDQTSCDWVTTDILVRVKDTFVDGQVMNQTGVIRSVTGGMCSVFLQDTEK
VVSISSEHLEPVTPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMELDEQLKILNLRFL
GKLEV
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatagtgaggacagcgacttctccgacaatcagagcgatcgcagcagtgaggcg
gaggaggttgaagaaaacgaggaggaggagggccaaggcagtgtcgcaggcagcgacaaa
ggagatgaggatgctgacgatgtagaggaagacgaggaagagtacgatgaagaggaggag
gaggatgacgatgaccggcctaggaagaaaccgaggcacggtggcttcatcctggatgaa
gctgatgtggatgatgaatatgaagatgaagattcatgggaggagggagctgaagatatt
ctggagaaagttaacgaggaagccgaagtgtccaacatcgatcatgtggtccttgatgaa
gaccactcaggctcccgccgactgcagaacctgtggagagattcaagagaagaggctctg
ggtgaatactacatgagaaaatatgcaaagtcttctggaggagaacatttctatggtgga
tcagaggagctctccgatgacatcacccaacagcagctgctccctggtgttaaggatcct
aatttgtggacagtcaaatgtaagataggagaagagcgagcgactgccattgcactgatg
aggaagttcattgcctaccagttcacagacacgccgctccagatcaaatcggtggtggct
cccgaacacgtcaagggctacatctacgtggagtcctacaaacagacgcacgtcaaggct
gccatcgagggcgtgggcaacctgcgcatgggcttctggaaccagcagatggtgcccata
aaggaaatgactgatgtcctcaaggtggtcaaggaggtgaccaacctcaagcccaagtcc
tgggtcaggctcaagcgaggcctgtacaaggatgacatagcacaggtggactacgttgaa
cccagccaaaacactatatcactgaagatgattcctcggatagatctggaccgcatcaag
gcacgcatgagcctgaaagactggtttgccaagaggaagaagttcaaaagacctgctcag
aggctgtttgatgctgagaaaatcaggtcacttggtggagaggtcagtcacgatggagac
ttcatgatattcgaaggcaaccgttacagccgcaaaggattcctcttcaagagctttgcc
atgtccgctgtgatcacagagggggtgaagcccacgctgtccgagctggaaaaatttgag
gaccagccagagggcatcgatctggaagttgtcacagaaacttcagggaaggagcgggag
cacagcctgcaggctggggacaatgtggaggtgtgcgagggggagctgatcaacctgcag
ggcaagatccttagcgtggagggcaacaagatcaccatcatgcccaaacatgaagacctg
aaggaccccctggagttccccgctcacgagctgaggaagtatttcaagatgggcgatcac
gtgaaggtgatcgcgggccgctacgaaggcgacacgggcctcatcgtgcgcgtggaggag
aacttcgtcatcctcttctcggacctcaccatgcatgagctgaaggtcctcccccgcgac
ctccagctgtgctcggagacggcgtcgggcgtggacgccgggggccagcacgagtggggg
gagctggtgcagctggacccccagaccgtgggcgtcatcgtgcggctggagagggagacc
ttccaggtgctcaacatgcacgggaaggtgctgacggtgcgccaccaggccgtgaaccgc
cggaaggacaaccgcttcgccgtggccctcgactcggagcagaacaacatccacgtcaag
gacattgtcaaggtcatcgacgggccccactcggggcgtgaaggggagatccgtcacctc
ttccggggattcgccttcttgcactgtaagaagctggtggagaacgggggcatgttcgtc
tgcaagacgcgtcacctggtcctggccgggggctccaagccccgggacgtgaccaacttc
acggttggcggcttcgcgcccatgagcccccgcattagcagccccatgcacccaggaggc
ggcggtcaacagcaaagaggtggaggaggaggaggcatggggcgtggtcggggaagacga
gacaatgacctcatcgggcagacggtccgcatttcccagggaccatacaaggggtacatt
ggggtggtgaaggatgccacggagtccactgctcgagtggagctgcactccacctgccag
accatctctgtggatcgccagcgtctcaccactgttggcgccaagaggcacggaggaatg
acctccattcatgggaggacccccatgtacgggtcacagacccccatgtatgggacaggc
tcccgtacacccatgtacggctcgcagacgcccatccacgacggaagccgcacccctcat
tacggctcgcagaccccgctgcatgatgggagcaggacgccagggcagagcggggcctgg
gaccccaacaaccccaacacaccgtcccgggccgaggaggagttcgagttcggctacgac
gacgagccctccccttcgccacagggctacgggggcacccccaacccacaaaccccaggg
taccccgaggtgccctctccacaggtcaacccgcagtacaacccccagacccccggtacc
ccagccatgtacaatacggaccagtactccccttatgccgccccctccccccaaggctcc
taccagcccagcccaagtccacagagctaccaccaggtggcgcccagcccggtgggctac
cagaacacacattctccagccagctaccaccctaccccctcgcccatggcctaccaggcc
agtccgagccccagcccggtagggtacagccccatgacccctggagccccctctcctgga
ggctataacccccatacccccgggtccaatatcgaccagacctcctgcgactgggtcacc
actgacatcctggtgcgggtgaaagacaccttcgtggacgggcaggttatgaaccagacg
ggggtgattcgcagcgtgacgggtggaatgtgttccgtcttcctccaggacacggagaag
gtggtcagcatctccagtgaacacctggagcccgtgactccaaccaagaacaacaaggta
aaggtgattttgggagaggaccgggaggccaccggggtgctgctgagtattgatggggag
gacggcatcgttaggatggagctggatgaacagctgaagatcctcaacctccgtttcctt
ggaaaacttgaagtgtga
DBGET
integrated database retrieval system
