Anguilla anguilla (European eel): 118210200
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Entry
118210200 CDS
T07545
Symbol
col4a4
Name
(RefSeq) collagen alpha-4(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang04382
Cornified envelope formation
aang04510
Focal adhesion
aang04512
ECM-receptor interaction
aang04518
Integrin signaling
aang04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118210200 (col4a4)
04518 Integrin signaling
118210200 (col4a4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118210200 (col4a4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118210200 (col4a4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
118210200 (col4a4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aang04147
]
118210200 (col4a4)
00536 Glycosaminoglycan binding proteins [BR:
aang00536
]
118210200 (col4a4)
Exosome [BR:
aang04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
118210200 (col4a4)
Glycosaminoglycan binding proteins [BR:
aang00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118210200 (col4a4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
118210200
NCBI-ProteinID:
XP_035242077
LinkDB
All DBs
Position
12
Genome browser
AA seq
1670 aa
AA seq
DB search
MKHFSCLVPLTEIYLWWMVMVYLSGNSVKAGELLEPCGGRDCSVCQCFPAKGSMGTPGRP
GSQGPRGPTGFPGPQGAPGEKGQHGDNGFPGTSGMKGDMGRMGLPGFSGIDGLPGHPGPG
GHPGLPGLDGCNGSRGEPGFPGLPGRDGPPGISGIPGRKGSKGEPVHYFNMLPGLPGDPG
PAGRAGQPGPPGTAGSMGPMGRIGFNGFEGPPGVPGPRGEPGDMGRPLKGDKGEEGDPGP
KGEPGPFETVQPPEDHHKRGEKGLKGYKGLCGVSGRDGRDTPPGPKGEKGIVGFPGERGP
PGYSGSPGLPGERGSGGTFGLPGLIGNPGPKGIRGDPGEKGRQMFQQNDCTGNSGDPGPP
GPMGAQGSRGEMGMHGVPGSPGVTIVGPKGQPGAPGPTGPKGMKGDPGRFYVNGPTPGEP
GKQGPKGPKGAIGQPGNPGFGGYYCVPGLTGDPGEDGDKGPPGPSGDSGMKGDNGDCECG
GPMNLIGNTGPMGPRGPPGYRGPPGSTGRKGNVGELGDPGERGTQGFSGFPGHRGEKGQK
GDLFIVDIKGPKGDQGPPGPPGPLGFFGRPGEEGKHGEIGSRGPEGDSSPGFPGDRGYTG
NPGEKGPPGLVGPPGIGIMGPVGKRGPQGEEGPLGLTGPPGPKGVQGDSQPCMPSDPGPS
GPKGLPGTPGNRGAPGSEGYRGYPGLDGPKGERGQPGPCCVSGPKGMPGWVGDVGDPGSE
GLSYDGFPGERGEPGPPGFQGPTGDSLNGASGPMGPKGIHGFSGPKGVPGPPGPTGEAGA
QGSPGLPGRKGPQGDIGEEGEPGPQGPTPPCNMGGPGTPGSNGLEGDRGPTGYQGDKGDL
GDTGPPGYGRKGRPGQPGRPGQPGCPGQQGPAGPTGDPGLQGTPGQKGFRGVPGGDGPPG
GPGQIGPPGSLGQKGERGFKGRDGWCGDDGPKGEKGRKGDPGPPAPPRISRIKGCTGGPG
SRGPQGFTGRRGDKGWPGDIGDPGYPGWDGPPGFEVGPRGPPGKSGRNGGPGPPGPTGPR
GLTGFPGDAGDQGDPGRSGFPGNPGPPGANGIKGDRGDSLGAPGPPGDRGPPGDNGQRAP
SGEPGDDGDPGMPGAPGCRGHPGPKGHTGPPGPPGACGPPGPCGETGAEGPMGQPGYPGP
SGNPGYPGIRGPPGPPGLHGLDGLKGVKGEKGVRGPGIPGPPGSRGYLGEKGPCGSPGLP
GPSQPGPKGSQGQLGCSGAPGPRGPTGPPGNDCVDARRGPYGEMGFPGPDGPPGPMGEIG
APGPSVPIPGDQGDPGGQGCKGAKGIAGPIGSPGPPGIPGLSGPKGERGSPGLIGYPGPP
GLPGTPGAPGCKGQKGFTGQPGPMGPKGEVVPPPPPPHPLGIPGPPGPPGPLGIPGKPGP
PGREGHRGLKGSVGWLGFPGLEGLPGPPGPVGDAGLPGELGRPGQQGPPGPMGDRGYPGP
TGRSRAAFLLVMHSQSDAIPQCPADMITLWSGYSLLYLEGQERAHTQDLGHAGSCLKVFG
TMPFASCSMASCDYASRNDKSYWLSTTAPAPATPVSGPQIQRHVSRCVVCEAPSPAVAVH
SQDTSVPACPNNWRSLWMGYSFLMHTGSGDEGGGQSLTSSGSCLKDFRRQPFIECQGPRG
TCHYFASAYSFWLTHVGMAEQFSPAPPMSTLKEEWEQRQRTSRCNVCMRE
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgaagcacttttcctgcttggtccccttgactgaaatttatctctggtggatggtgatg
gtgtatctttctgggaacagtgtgaaagcgggagaactgctggagccctgtggtggaaga
gactgctctgtgtgtcagtgtttcccagccaagggatcaatgggaaccccaggaagaccg
ggatcacaggggccccggggccccactggtttccccggccctcagggggccccgggagaa
aagggacagcacggggacaatggcttccccgggacatcaggaatgaaaggggacatgggt
aggatgggtttgcctggattttctgggatcgacggtttgccgggtcatcctgggccaggg
gggcacccaggacttcctggtctagacggctgtaacgggtcgaggggagagcccggtttc
cctggactgcctggacgggatggacctcctgggatatctggcattccagggcggaagggg
tccaagggagagcctgtccattacttcaacatgctccctggtcttcctggtgaccctggg
ccagcagggcgtgccgggcaacctggaccacccggcactgctggctccatgggccccatg
ggacgcatcggtttcaatggattcgaaggcccgcctggtgttcctggaccgagaggtgaa
cctggagacatgggcaggccacttaaaggagacaaaggagaggaaggagacccagggccc
aaaggcgagccaggaccctttgagactgttcagccaccagaggatcatcacaaacgagga
gaaaaggggctgaaaggttataagggattgtgtggtgtcagcggcagagatggaagagac
acccccccaggaccgaaaggagaaaagggcattgtgggatttcctggagagcggggcccg
cctggatatagtgggtctcctggactacctggagaaaggggttcaggtgggacttttgga
cttccaggtctgatcggcaacccagggcccaagggcatcagaggagaccccggggagaaa
ggacgccaaatgttccaacaaaacgattgcacagggaacagcggtgaccctggcccccct
gggccaatgggtgcccaagggagcaggggggagatggggatgcatggggtgcctgggtct
cctggtgtgacaattgtggggcccaagggccagccaggagctccaggccccactggaccc
aaagggatgaaaggagaccctgggaggttctatgtgaatgggccaacacccggagagcct
gggaaacaggggcccaaaggaccaaaaggggccataggccaacctggaaatccaggcttt
ggagggtattactgtgtgcctggcctgacgggagaccctggtgaagatggagataaaggt
ccacctggaccttccggggacagtggcatgaaaggtgacaacggagactgtgaatgtggg
ggtcccatgaatttgattggaaacactgggcctatgggtccacggggcccaccaggttac
cgaggcccccctggaagtacagggaggaagggcaatgtaggcgagctgggggaccctgga
gaaagggggacacaaggcttctcgggatttccagggcatcgaggtgaaaagggtcagaaa
ggtgacctcttcatcgttgacattaaaggtccgaaaggtgaccaagggccccctggcccc
cctggccctttgggattttttggcagacctggggaggaagggaagcatggtgaaattggg
agccgtggccctgagggtgatagttccccggggtttcctggtgacagagggtatacgggt
aatcctggggaaaagggaccccctggtctagtgggcccccctggcattggtatcatgggc
cctgtgggcaagcgaggaccgcaaggagaggagggccccctaggacttacaggaccccct
ggacccaaaggtgtccaaggtgactcacagccctgcatgcccagcgatcctggtccttct
ggcccgaagggtctgcccggtaccccagggaacagaggggcaccaggaagtgaggggtac
cgcgggtatcctgggctagacgggcccaagggggaaaggggacagcctgggccttgttgt
gtgagcggtccgaaaggaatgcccggatgggtaggagatgtgggagacccaggctctgaa
gggctgagctatgatggctttccgggagagcggggcgagcctggtccaccagggttccag
ggcccgacaggagactctttaaacggtgcatccgggcctatggggcccaaaggaatacat
ggcttttctggtcccaaaggagttccggggcctccaggtccaactggagaagcaggtgcc
caagggtcccccggcctgcctgggagaaaggggccacagggggacataggggaggagggt
gagccaggcccccaaggcccaacacctccatgtaacatgggagggccaggaaccccaggc
tctaatggattagaaggtgatcgaggccctacaggttatcagggtgataaaggtgatctg
ggagacacagggccccccgggtatggtaggaaaggacgccctgggcaaccgggccgcccg
gggcagcctgggtgccctggacagcagggccccgcaggacctacaggggaccctggactc
cagggcacgccgggacagaagggctttcgtggagtccctggtggagacgggccgcctggt
ggccctggacagatagggccacctggaagtctgggacaaaaaggggagagagggttcaaa
ggccgtgatggctggtgtggggatgatggaccgaaaggagaaaagggccgcaaaggggat
ccgggccctcctgcacccccgcgaatcagcaggattaagggctgcacaggcggccctgga
agccgtggccctcagggcttcactggaagaagaggtgataagggctggcctggagatatt
ggtgaccctgggtatcccggttgggacggcccaccaggttttgaggtgggcccacgagga
ccacctgggaagagtgggcgtaatggtggccctggcccacctgggcccactggtcctagg
ggactcactggtttccctggagacgccggtgaccagggtgatcctgggcgcagtggattt
cctggtaatccaggcccccccggagccaatggcattaaaggagacagaggggactctttg
ggtgctcccggtccacctggcgacagaggaccgcctggtgataatggacaacgtgctcca
tcaggtgaaccaggtgatgatggtgacccaggaatgcctggtgccccagggtgcaggggc
catcctggtccgaaaggacacacgggccctccagggcccccaggtgcttgcgggcctcca
gggccttgtggagaaacaggggctgaagggccaatgggccagcctggatatccggggccc
agtggaaacccaggataccctggaatcagaggccctcctggaccccctgggttacacggt
ctagatggtctgaagggggtgaaaggggagaagggggtcagaggaccaggtatcccaggg
cccccaggatccagaggctacctaggggaaaagggcccttgtggttccccgggccttcct
gggccctcccaaccaggcccaaagggttcccagggtcagctggggtgttctggtgcccct
ggaccacgtggacctactggtccaccaggcaatgactgtgtagatgccagacgagggcct
tatggagagatgggcttccctggaccagatggtccaccagggccaatgggtgaaatcggg
gcccctggtccatctgtaccgatcccgggagaccagggggaccctggtggacaaggatgc
aaaggggccaaaggaatagcaggccctataggctccccaggacctcctgggattccagga
ctgtcaggccccaaaggtgagagaggatctcctgggttaatagggtatccaggaccccct
ggcctccctggcacacctggtgcccctgggtgcaagggacaaaaagggttcacaggacaa
ccgggccccatgggtcctaaaggcgaggttgtgcccccaccacctccacctcacccactt
gggattccagggccccctggcccgccggggcctttgggtattcctggcaaacctggcccc
ccagggagagaagggcatagaggattaaagggatcggtagggtggcttgggttcccggga
ttagaggggcttccaggaccacctggacctgtaggagatgcaggcttgcctggagagctg
ggacgccctggccagcaaggtccccctggtcccatgggggatcgcggatatccaggccca
accgggaggtctcgcgccgccttccttttggtgatgcacagccagtcagacgccattccc
cagtgtccggcggacatgatcacgctgtggagtggctacagtctgctgtacctggaggga
caggagagagcgcacacgcaagacctgggccacgccgggtcgtgcctgaaggtcttcggc
acgatgccgttcgcttcctgcagcatggcgtcctgcgactacgccagcaggaatgacaag
tcgtactggctgtcgaccacagcgccggcgccggccacgcccgtgtcggggccgcagatc
cagcggcacgtgagccgctgcgtggtgtgcgaggccccctcccccgccgtggccgtgcac
agccaggacaccagcgtccccgcctgccccaacaactggaggagcctgtggatgggctac
tccttcctcatgcacacggggtcaggtgacgaggggggcgggcagtcgctgacgtcttcg
gggagctgcctgaaggacttccgccggcagcccttcatcgagtgccagggcccgcgcggc
acctgccactacttcgccagcgcctacagcttctggctgacgcacgtgggcatggccgag
cagttcagccccgcccccccgatgagcacgctgaaggaggagtgggagcagcgccagcgc
accagccgctgcaacgtctgcatgagggagtga
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