Anguilla anguilla (European eel): 118210201
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Entry
118210201 CDS
T07545
Symbol
col4a3
Name
(RefSeq) collagen alpha-3(IV) chain
KO
K06237
collagen type IV alpha
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang04382
Cornified envelope formation
aang04510
Focal adhesion
aang04512
ECM-receptor interaction
aang04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118210201 (col4a3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118210201 (col4a3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118210201 (col4a3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
118210201 (col4a3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aang04147
]
118210201 (col4a3)
00536 Glycosaminoglycan binding proteins [BR:
aang00536
]
118210201 (col4a3)
Exosome [BR:
aang04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
118210201 (col4a3)
Glycosaminoglycan binding proteins [BR:
aang00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118210201 (col4a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
118210201
NCBI-ProteinID:
XP_035242081
LinkDB
All DBs
Position
12:complement(16457748..16495806)
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AA seq
1666 aa
AA seq
DB search
MIRAVHSPVAFSVFLLGLWCCGIPATVRSENECICNRASRCHCDGVKGNKGEMGYPGFDG
PPGESGFPGIEGRPGPVGPKGDIGFPGPPGPKGSQGRDGSPGFFGAPGLPGSPGNAGPMG
LPGIPGCNGTKGDSGSPGFPGVPGPVGLPGLNGETGPKGDTSYMPHYVDVKGERGPPGPN
GVKGPHGTPGLHGPPGPMGPHGNPGFPGLRGVPGEKGREGLRSVPAPRGLKGNRGDRGLP
GEKGVKLYLLGQNELKGMPGDPGEKGCAGIPGRPGRHTRDPEKGDQGEPGPEGKPGKTGN
PGYLGIKGEKGESGNSGPPGIEGSTGDKGDTGPVGPPGEVQYRDVFIKGQQGLPGPPGPP
GPKGYPGVSGFPGQTGPPGLPIPGLQGSPGYPGSSGLKGDTGDPGPYVRGSPGPSGTPGP
VGSPGDPGPPGRPDVAKGRPGPPGVRGPKGSGGPPGMQGNFGSRGEKGDCCRLCPLTEAE
PGPPGPPGVHGMPGCDGEPGDPGPEGYKGSKGLRGPVGPPGPYGEPGRKGFPGPKGDKGF
SDEIGQKGEIGFAGLHGFPGSSGVDGPPGYPGPKGWQGPKGNPGLPGPKGDIGPLGLSGP
PGCQGQLGGPGPIEMGPEGFPGPKGDRGVQGLYGRPGDPGEKGSQGTTVPSPGDPGPRGE
RGVSGNPGPPGDPGPTGFRGLPGTFGSKGDMGSFEHGPPGDPGVKGDKGQPGKPGEASVG
PPGRRGPNGASGNPGPKGDISFGPPGPTGRQGSPGEEGALGPSGNMGPQGPPGCAGTPGS
EGPAGEQGPPGYTGMPGLPGPAGICSPGCEGSQGPAGQKGYRGPTGQTGRKGRTGDPGDP
GEGFEGMVGGFGPPGINGTQGSVGPAGLKGFRGQDGFPGASGPRGDPGSPGTFGQPGLVG
PKGHEGRPGPKGLMGTDGAKGAKGCKGVVGAKGHQGPGGPPNDIVVKGPPGDPGPAGLQG
RTGTKGDPGDPGPGGPCGKNGPPGSPGPQGPPGDPGVDGNPGGPGFSGSPGFPGKDGLLG
LKGQKGVGGAAGEPGSRGTPGSNGRKGDKGQPSLPGPGPKGLQGEKGVPGFPGHKGNKGH
RGISGNMGPEGSRGPPGPQGDPGFPANPGSPGPPGDKGNYGLSGLPGAPGPNGPPGVTGN
AGDPGRQGNKGNQGLDGIPGPVGEKGDMGVVGIGNPGETGPKGPTGLKGDPGVPGPFGPP
GPRGPLGETGPCGPPGPPGSTGRLGQDGMCFSGTKGERGPIGAVGGPGSRGSCGPPGPPG
PGFKGDKGDPGAPGQEGLPGERGDVGLPGRNGGDGKNGLRGPKGESGTLGPTGPSGVTGD
SRARGLPGPQGNEGPPGPPGPKGEVVFIDAIFFPGDQGDPGPEGLYGEQGPPGEPGPVGF
PGRPGPKGATGPGGVSGLPGPQGPKGDRGPPGQSGLQGFLGFPGHKGIRGQPGDHFSGPG
QDSFLFTRHSQRQQEPQCPDGSNFIYSGYSLIYINGNSRGHGQDLGTLGSCLLRFSTMPF
LYCNPDSTCHYASRNDYSYWLSTDEQAPTDAPLIPAESVERYISRCSVCETSASLIPVHS
QTNEIPECPRGWRSLWTGYSFLMQTGAGAEGSSQPLASPGSCLEKFTKVPSLECHGRGTC
NYYRDSYSYWLASLDPNNMFSQPVPWTVREDAPGSLISRCRVCMKL
NT seq
5001 nt
NT seq
+upstream
nt +downstream
nt
atgatccgtgcagtccactcaccggtcgcatttagcgtttttctgctggggctttggtgt
tgtgggattccagcaacagtgcgctcggagaatgagtgtatctgtaacagggcatccagg
tgtcattgtgatggagtgaaaggcaacaagggagagatgggatacccagggtttgatggt
cctccaggagaatctggtttcccagggattgaaggtcgtcctggaccagtaggcccaaag
ggagacattggctttcctggacctccaggacctaaaggctcacaggggcgtgatgggagt
ccaggattctttggagcaccagggctgccaggctcccctggaaatgcaggacctatgggg
ctccctggaatcccaggatgcaacgggacaaaaggtgacagcggatctcctgggttccct
ggagtgcctggaccagttggactgccaggtttaaatggagaaactggacccaagggggac
accagctatatgccacattatgtggatgtgaaaggagaacgtggtccaccagggccgaat
ggtgtgaagggcccccacgggacaccaggcctgcatggccctccggggcccatgggaccc
catggtaatccggggttcccagggttacgcggtgtgccaggtgagaagggtagagagggg
ttgaggagtgtcccagcgccacgaggtctgaagggaaacagaggcgatcgtggactacct
ggtgaaaaaggagtaaagttatatctgcttggacaaaatgaactgaaggggatgccaggt
gacccaggagagaagggctgtgctgggatacctggtcgtcctggaagacacacgcgtgac
ccggagaaaggcgaccaaggagagcctggccctgagggaaaacctgggaagactggtaat
ccagggtaccttggcattaagggggaaaaaggagaaagtggcaactctggccctccagga
atcgagggttcaacgggcgataaaggagacacaggtcctgttgggccaccaggggaagtg
cagtacagggacgttttcatcaaagggcagcagggattacctggccctccaggacccccg
ggcccgaaaggttacccaggtgtgagtggtttccctggacaaactggcccaccagggtta
cctatccctggccttcaggggtcgcccggttaccctggctcttctggcctgaaaggggac
acaggcgacccgggcccttatgtcaggggctcccctggaccgagtggaactcctggaccg
gttggttccccgggagatcctgggcctcctggaaggccagatgttgcaaagggccgccca
ggaccccccggagtacggggccccaaaggcagtggaggccccccaggaatgcagggcaat
ttcggaagtcgcggtgagaagggtgattgctgcagactctgtccgcttacagaagccgaa
cctggaccgcccggcccaccaggggtccacggcatgcctggatgtgatggtgaaccagga
gatccagggcctgaaggatataaaggaagcaaaggtctgaggggtccggttggtcctccg
ggaccctatggtgagccaggacgaaaaggttttccaggacccaagggtgacaaaggcttc
agtgatgagattggacagaagggggagattggatttgcaggccttcatggatttccagga
tcgagtggtgtggatgggccccctgggtacccaggaccaaagggttggcagggtccaaag
ggaaatccgggattacctgggccgaaaggagacattggcccccttgggctctctgggccc
ccaggatgtcaagggcagttggggggaccgggccccattgaaatggggcctgaagggttt
cccggaccgaagggagatagaggggttcaaggcctttacgggagacctggagacccagga
gagaaagggtcgcaaggcacaacagtgccaagcccaggtgatccgggtccgaggggtgag
aggggcgtctcaggcaatcccggaccaccaggtgatcctggccccacaggattcagaggt
ctgcctggcacttttggcagcaagggtgacatgggttccttcgagcatggtccccctgga
gaccccggggtcaaaggtgacaaaggccagccagggaagccaggtgaagccagtgtgggg
cccccaggaagaagagggccaaacggagcctctgggaatccagggccaaagggtgacatt
agttttgggccccccggcccaacaggcagacaagggtccccaggggaagaaggtgctctt
gggccttcaggtaatatggggccacagggtccacctggatgtgctggaacacctgggtca
gaaggccccgctggggaacaaggtcccccgggttatactggtatgccaggattgccaggt
cctgctgggatctgctcacctggatgtgaggggtcacagggtccagcgggtcagaaaggc
tacagaggccccactggtcaaacaggacggaaaggaaggacgggggacccaggtgaccca
ggggagggctttgaaggcatggtaggcggctttggccctccagggattaacggaacacag
ggatcagtgggacctgcggggctgaagggtttcagaggacaagatggcttccctggagct
tcaggccccaggggtgatccaggaagcccagggacctttgggcagcctggactagttggc
cccaagggacatgagggccgacctggccccaaagggctcatgggcactgatggagcgaag
ggtgcgaaggggtgtaagggagtcgtgggggccaaaggacaccaaggacctggaggaccc
cctaatgacattgttgtcaaagggccccctggggatcctggaccagcggggctacagggg
cgcacaggcactaaaggggatccaggagacccgggacccggtgggccttgtgggaaaaat
gggcccccaggaagtcctggtccacaagggcctcctggtgatccaggtgttgacgggaac
cctggaggtccgggtttctctggtagccctggtttcccgggcaaggatggcttacttggt
ctgaaaggtcagaagggggttggtggggctgctggagagcctgggtcacgtgggacacca
ggttcaaatggacgtaaaggggacaaaggtcaaccaagcctacctgggcctggtcccaaa
ggactgcaaggagaaaagggtgtaccaggcttcccaggtcataaaggaaacaaggggcac
agaggcatttcgggtaacatggggcctgagggctcccgtggtcctccaggaccccaagga
gacccgggcttcccagcaaatccaggatccccagggccgccaggggacaaagggaattat
ggactttcaggacttcctggcgctcctggtcccaatggccctccaggagtcacagggaac
gctggagatcctggtcggcaaggcaacaaaggcaaccagggcctcgatggaatcccaggc
cccgtgggagagaagggcgacatgggtgttgttggaataggaaacccaggtgaaacaggc
ccaaagggtccaacaggcctgaaaggagatcctggagttcctggcccctttgggccccct
ggtcccagaggccccctcggtgaaactgggccctgtggcccccctggcccccctggcagc
actggccgcctcgggcaggacggaatgtgttttagtgggacgaagggcgagcgagggcct
ataggcgctgtggggggaccagggtcgcggggctcctgtgggcctccaggacctccaggg
ccagggtttaaaggagacaagggggatccgggggccccggggcaagagggtctgcctggg
gaaagaggggacgttgggttgcctgggagaaatgggggagatggtaaaaatggtttgcga
gggccgaaaggtgaatctgggacattaggaccaacaggaccaagtggtgtgacaggagac
tccagggcgcggggtctgcctgggccccaaggaaatgaggggcccccggggccaccagga
ccgaagggcgaagttgttttcatagatgcaatattcttcccgggggaccaaggtgatccc
gggcctgaaggactgtatggggaacagggaccgccaggagagccaggcccagtaggattt
ccaggacgccccggtcctaaaggtgccactggcccaggaggggtttctgggctcccaggg
ccccaaggaccaaagggtgacagagggcccccaggacagtcagggctgcaggggtttctg
ggcttcccgggccataagggtatccgtgggcagccaggagaccatttctcaggcccaggg
caggacagcttcctgttcactcggcacagccagaggcagcaagagccacagtgtcccgac
gggagcaacttcatctactccggctactccctcatctacatcaacggcaacagcagagga
cacggccaagacctaggcactctgggaagctgtctgctccggttctccaccatgcccttt
ctgtactgcaacccagacagtacctgtcactacgcttcccgcaacgactactcctattgg
ctgtccactgacgaacaggcgcccactgacgcgccactcatcccggctgaatcggtggag
agatacatcagcaggtgttcggtgtgtgagaccagtgccagtttaatccccgttcacagc
cagaccaatgagattccagaatgcccccgtggatggcgctctctgtggacaggctactcc
ttccttatgcaaacaggcgcaggagctgagggctctagccagccgctggcttcgccaggg
tcctgtctggagaagttcactaaagtcccttccctggagtgccacgggcgtggaacctgc
aactactacagggactcctacagttactggctggcctctctcgaccccaacaacatgttc
agccagccggttccttggacggtgagggaggacgccccagggagcctgatcagccgctgc
cgcgtgtgcatgaagctgtga
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integrated database retrieval system