Anguilla anguilla (European eel): 118210510
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Entry
118210510 CDS
T07545
Symbol
pdzrn3b
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3-B isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
aang
Anguilla anguilla (European eel)
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aang04121
]
118210510 (pdzrn3b)
Enzymes [BR:
aang01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118210510 (pdzrn3b)
Ubiquitin system [BR:
aang04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
118210510 (pdzrn3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
Sina_ZnF
Prok-RING_4
zf-TRAF
PDZ_Tricorn
U-box
TRAF3_RING
zf-RING_6
TRAF2_zf
Motif
Other DBs
NCBI-GeneID:
118210510
NCBI-ProteinID:
XP_035242620
LinkDB
All DBs
Position
13:complement(27998374..28087394)
Genome browser
AA seq
1042 aa
AA seq
DB search
MGFELDRFKGAVDPDFKCNLCNKVLEDPLTTPCGHVFCAGCVLPWVVQQSSCPVKCQRIS
TKELNHVLPLKNLILKLDIKCDNYARGCEKVVKLQHLAEHAEMCDYSPAKCRNKGCNEVL
NLKDMDAHMRETCDYRPVGICESGCGLMLIHKEHKLGSHCCLKALKTHNSALQAKVLGLD
KEFKKQSLKSSKREKSLLAQLSAVHNELQMTALKYQKKFTEYSARIDSLTKTLAPPCKGG
ETKNIKVVLHRESGSLGFNIVGGRPCGENEDGSSNEGIFVSKIVENGPADKEGGLQIHDR
IMEVNGKDLSKATHDQAVEAFRTAKEPIVVQVLRRTPRPKAVSPASDAQVVDISTQTEIT
FQHIMALTKLPAAATPVDVLEQYLLPEEHSPGHEYFDPSDFLEGMQQDMEREELEYEEVD
LYRVNIQDKLGLTVCYRTDDEDETGIYVSEIDPNSIAAKDGRIREGDRIIQINGIEVQNR
EEAVALLTSEESKNVCLLVARPEIQLDEGWMDDDRNDFLDDLHMDMLEQQHHQAMQFTAS
MLQQKKREEDGGTTDTATLLSNHLEKDSGVGRTDESTRNDESSEQENLGDDQTTSSNTLG
SRRKLAYSQDTLGSADLPFSSESFISADCADADFLGIPADECERFRELLELKCQVQSAGP
HGPYCPGAEGDGEGVDKELELLNEELRSIELECLNIVRAHRMQQLREQYRESWMLHNSGF
RNYNTSIDARRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLELSPDNSLRRGDEGG
AEGAAAGARLPKPLLSPVQEASPTRPRPKEAEPCLPPDGKEGQSGEAGTAGKSSVLPQPR
SPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVSMCRDAVSPGDLEPKMEWKVKI
RSDGTRYITKRPVRDKLLKERALRIREERSGMTTDDDAASELKMGRYWSKEERKQHVVRA
KEQRQRREFMKQSRIDCLKEQSAATDDKKELNIIELSHKKMMKKRNKKIFDNWMTIQELL
THGTKSPDGTRVYNSLLSVTTV
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgggatttgagctggatcgttttaagggggccgtggacccagattttaaatgcaacttg
tgtaataaagttttggaagatccgcttacaactccgtgtggtcacgtattttgtgctggc
tgtgtgctgccttgggttgtccagcagagcagctgccccgtcaagtgccaaagaatctca
acgaaagagctgaaccacgttctccctctgaaaaaccttattctgaaactggacataaag
tgtgacaactatgcaaggggctgtgaaaaagtagtgaagctacaacatcttgcggaacac
gccgagatgtgcgattactcgccagcgaaatgtaggaataagggatgcaatgaagtactg
aatctgaaggacatggatgcccacatgcgcgagacctgtgattacagaccggtcgggatt
tgtgaaagtggatgtggattgatgctcatccacaaagagcataaattaggcagccactgc
tgtttgaaagctctgaaaactcacaacagcgcgctgcaagcaaaagtgctcggcttggat
aaggagttcaagaagcagtctctgaagtctagcaaacgagagaaatcacttctggctcaa
ctctctgcggttcacaacgagcttcaaatgacagcactgaagtatcagaagaaattcacc
gaatacagcgcgaggatcgattcgctcacgaagaccctcgcgcctccgtgcaagggcggg
gagactaagaacatcaaagtggtgctccaccgagaatccggatctctgggatttaacatc
gttggtggcagaccgtgcggggaaaatgaggatggctcatccaatgaggggatctttgtg
tccaaaatagtggagaacggaccagcggacaaggagggcggacttcagatccacgacagg
ataatggaggtgaacgggaaggacctgtccaaggccacccatgaccaagcggtggaggcc
ttccgtacggctaaggagccaatcgtggtccaggtgctccgccggacgccccgccccaaa
gccgtgagccccgcctccgatgcccaggtggtggacatcagcacgcagaccgaaatcacc
ttccagcacatcatggcactcaccaagctgcccgctgccgccacgcccgttgacgtgctg
gagcagtacctgctgccggaggaacactccccgggccatgaatacttcgaccccagtgac
ttcctggagggcatgcagcaggacatggagagagaggagctggaatatgaggaagtggat
ttatacagagtaaatatccaggacaagctgggactgacagtttgttacaggactgacgat
gaagatgagactgggatttatgtgagcgagattgatccaaacagcattgctgcaaaggac
ggccggattagggaaggtgaccgcatcatccagatcaatgggatcgaggtgcagaatcgg
gaggaggcagtggcattgctgaccagcgaagagagcaagaacgtctgcctgctcgtggct
cgaccggagatacagctggatgagggatggatggacgatgacaggaacgactttctggat
gacctccacatggacatgctggagcagcagcatcaccaggccatgcagttcactgctagc
atgctgcagcagaagaagcgggaagaagacggcgggaccacagacacggccaccctcctg
tccaatcacctggagaaggacagcggggtgggccggacggacgagagcacgcgcaacgac
gagagctccgagcaggagaacctgggcgacgaccagaccacgtcctccaacacgctgggc
agccgcaggaagctggcgtacagccaggacacgctgggcagcgccgacctgcccttcagc
agcgagtccttcatctccgccgactgcgccgacgccgacttcctgggcatccccgccgac
gagtgcgagcgcttccgcgagctcctggagctcaagtgccaggtgcagagcgcggggccg
cacggcccgtactgcccgggcgccgagggcgacggcgagggcgtggacaaggagctggag
ctgctgaacgaggagctgcgcagcatcgagctggagtgcctgaacatcgtgcgggcgcac
cgcatgcagcagctgcgcgagcagtaccgcgagtcctggatgctgcacaacagcggcttc
cgcaactacaacaccagcatcgacgcgcggcgccacgagctctccgacatcaccgagctg
cccgagaagtcggacaaggacagctccagcgcctacaacacgggcgagagctgccggagc
acgccgctcacgctcgagctgtcccccgacaactccctgcgccgcggcgacgagggcggg
gccgagggggccgccgccggcgcccggctccccaagcccctgctgtccccggtgcaggag
gccagccccacgcggccgcgccccaaagaggcggagccctgcctgccgccggacgggaag
gagggccagtcgggcgaggccggcacggcggggaagagctccgtgctgccccagccccgc
tcaccctacaagcacgcccacatccccgcccacgcccagcactaccagagctacatgcag
ctcatccagcagaagtcggcggtggagtacgcccagagccagatgagcctggtgagcatg
tgcagggacgccgtctcccccggcgacctggagcccaagatggagtggaaggtgaagatc
cgcagcgacgggacgcgctacatcaccaagcgcccggtccgggacaagctgctgaaggag
cgcgccctgcgaatccgcgaggagcgcagcggcatgaccacggacgacgacgccgccagc
gagctgaagatgggccgctactggagcaaggaggagcgcaagcagcacgtggtgcgggcc
aaggagcagcggcagcggcgggagttcatgaagcagagccgcatcgactgcctgaaggag
cagagcgccgccaccgacgacaagaaggagctcaacatcatcgaactcagccacaaaaag
atgatgaagaagaggaacaagaagatcttcgacaactggatgaccatccaggaactgctg
acgcacggcaccaagtcgcccgacggaacgcgagtgtacaactccctcctgtccgtcacc
accgtgtag
DBGET
integrated database retrieval system
