Anguilla anguilla (European eel): 118210991
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Entry
118210991 CDS
T07545
Symbol
rbm39a
Name
(RefSeq) RNA-binding protein 39a isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
aang
Anguilla anguilla (European eel)
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aang03041
]
118210991 (rbm39a)
Spliceosome [BR:
aang03041
]
Common components
Common spliceosomal components
General mRNP proteins
118210991 (rbm39a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_MUD2_C
RRM_occluded
DUF8400
RRM_5
PRP38_assoc
RBD_DEAH11
RRM_7
RSRP
Motif
Other DBs
NCBI-GeneID:
118210991
NCBI-ProteinID:
XP_035243477
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All DBs
Position
13:10432752..10445607
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AA seq
542 aa
AA seq
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MADDFDIEAMLEAPFKKDELRSSSANGHEERSKKKKRSKSRSKSRDRRRSKSRDRKKGRD
TKRSKSREKKRSRSKERRRSRSRSRERGGRYRVRKSPFSGPKFNGGPRGKIGPPPAIKLS
RRRSRSRSPFKKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSAVGKVRD
VRMISDRNSRRSKGIAYIEFVEATSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAMANN
LQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFADA
ECAKKALEQLNGFELAGRPMKVGHVTERTDASTASSFLDSDELERTGIDLGTTGRLQLMA
RLAEGTGLQIPPAAQQALQMSGSIPFGAMAAVTDLQARLTQPPEAAAMNPALNLNLNMNM
NVNTPLNLPTQPIATHCFQLSNMFNPQSEDGPGWDIEIQDDVMEECNKHGGVVHIYVDKN
SAQGNVYVKCPTIPAAMAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSVTATQLLMPN
RR
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgactttgatatagaagctatgcttgaggctcctttcaaaaaggatgagctc
aggtccagtagtgccaacggacacgaggagcgtagtaagaagaaaaagaggagtaaaagt
cgtagcaagagccgcgacaggcgcaggagcaaaagtcgggaccgcaaaaagggtcgggac
acgaagaggagcaagagccgcgagaagaagcgcagccgcagcaaagagcggcgccgcagc
cgctcgcgcagccgggagcgcggcggccgctaccgagtccgcaagagccccttttctggg
ccgaaatttaacggtggtcccagggggaagattggcccaccaccagccatcaaactaagc
cggaggaggtctagaagccgcagcccgttcaagaaagacaagagcccagtcagggagccc
atcgataacctgaccccggaggagcgggacgcccgcaccgtcttctgcatgcagctggcc
gcccgcatccgcccccgcgacctggaggagttcttctcagccgtgggaaaggtgagagac
gtgaggatgatttcggacagaaactcccggaggtcaaagggcatcgcctacatcgagttt
gtggaggcgacctccgttcccctggccatcggcctcacgggccagagactcctgggcgtg
cccatcatcgtccaggcctcgcaggcggagaagaacagggccgccgccatggccaacaac
ctgcagaagggcagcgccgggcccatgaggctgtacgtgggctccctgcacttcaacatc
accgaggacatgctgcgcgggatcttcgagccgttcgggaggatcgaaagcattcagctg
atgatggacagcgaaacggggcggtccaaaggatacggtttcatcacgttcgcagacgcc
gagtgcgccaagaaggccctggagcagctgaacgggttcgagctggccgggcggcccatg
aaggtgggccacgtgacggagcgcacggacgcgtccaccgccagctccttcctggacagc
gacgagctggagaggaccggcatcgacctgggcaccaccggccggctgcagctcatggcc
cggctggccgaaggcacgggcttgcagatcccccctgcagcacagcaggctctgcagatg
agcgggtccatacctttcggagccatggcagctgtgacggatttacaagccaggttgact
cagccccctgaagctgctgctatgaacccagcgttgaacttaaacctgaacatgaacatg
aatgtgaacactcccttgaatctgcccacccagcccatcgccacacactgctttcagctc
tcaaatatgttcaaccctcagtcggaagatggtcctggctgggacattgaaattcaagat
gatgtcatggaagaatgcaacaaacacggcggggttgtgcacatatacgtcgacaagaat
tctgcacaaggaaacgtgtacgtgaaatgtccgaccatccccgccgccatggccgccgtg
aacgcgctgcacggacggtggttcgcagggaagatgatcacggccgcgtacgtccccctc
cccacgtaccacaacctgttccccgactccgtgaccgccactcagctgctgatgcccaac
cggcgatga
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