Anguilla anguilla (European eel): 118212089
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Entry
118212089 CDS
T07545
Symbol
ddx54
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
aang
Anguilla anguilla (European eel)
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aang03009
]
118212089 (ddx54)
Enzymes [BR:
aang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118212089 (ddx54)
Ribosome biogenesis [BR:
aang03009
]
Eukaryotic type
Pre-60S particles
Helicases
118212089 (ddx54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
DNA_pol3_chi
Motif
Other DBs
NCBI-GeneID:
118212089
NCBI-ProteinID:
XP_035245567
LinkDB
All DBs
Position
14:complement(23664753..23678245)
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AA seq
866 aa
AA seq
DB search
MAQRKKKFTKKKRHMGSKLKEPDLDSDGGEFELAAQMQDDTPERKTLRFPAASECLSDVE
PDTRELVRAQNKKKKKSGGFQSMGLSYPVFKGVMKKGYKVPTPIQRKTVPLIMDGKDVVA
MARTGSGKTAAFLIPMFERLKAPQAQTGARALILTPTRELALQTMKFTKELGKFTGLKTA
LILGGDSMDDQFAALHENPDIIIGTPGRLMHVVMQMNLKLHGVEYVVFDEADRLFEMGFA
EQLQEIIRRLPDSRQTLLFSATLPKLLVEFARAGLTEPVLLRLDVDTKLSDQLQLAFFHL
RMDEKPALLLHLLRNVVKPQEQTVVFVATKHHVEYLKELLMSEGVDCAYIYSALDQTARK
INIGRFVHRKAMVLLVTDVAARGIDIPLLDNVINYNFPSKAKLFLHRVGRVARAGRSGTA
YSLVCTDEVPFVYDLHLFLGRPLQLALPEHPQDADGVFGRVPQSVLDDEEAQLITAHQNS
LDLQNLRRIAENAYKQYLKSRPSPSPESFKRVKNTELSGMAVHPLLGSGLESMELDRLKM
VDSIKTYKSKATIFEINSSSKTAASEVMRAKRSRDTRLVDKFQRAREDRAAKGLMKCPAP
PRPAPADPGHSESEEEDIQGVFSRVVGGKRRKNLEEVEEEVEGDAAGPKTKKTKTRGPVC
DEEFYIPYRPKDFNSERGLSLGGEGSAFELQASSAVLDLMGDEGEQLNQHKSMMKWDRKK
KRFVRETGKEDKKKKVRTESGQVVSSKKKKSFYEEWKKKYKMDDGGSDSEGETGGKGRRP
GGGRRGRRGPQQQQQQAEQKGGARARSELRSREQILKNRKRQQKQQFLQSGALKKLRGRS
RQRLGEVKKSGFGRGATKKGKLRKRL
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaaggaagaaaaaattcacgaagaaaaaacgacatatggggagtaaattaaaa
gaacccgatttggattcggacggtggcgaatttgaactggctgcccagatgcaagatgac
acgcctgagaggaagaccctccgcttccccgccgcatcggagtgcctctccgacgtggag
ccggacaccagggaactggtcagggcgcagaacaagaagaagaaaaagtctggaggtttc
cagtcaatggggctcagctatccagtgttcaaaggggtcatgaagaagggctacaaagtc
cctactcctattcagagaaagaccgttcccctgatcatggacgggaaggacgtggtcgcc
atggcgcggacgggcagcgggaagacagcggcgttcctgatcccgatgttcgagcgcctg
aaggccccgcaggcgcagacgggcgcccgcgccctgatcctgacgcccacgcgtgagctg
gcgctgcagaccatgaagttcaccaaagagcttggcaagttcaccggccttaagacagca
ctgatcctgggaggagacagcatggacgatcaattcgctgctctgcatgaaaacccagat
atcatcattggcacccccggccgtctgatgcacgtcgtcatgcagatgaacctgaagctg
cacggcgtggagtacgtggtttttgacgaggctgacaggctgtttgagatgggcttcgcg
gagcagctccaggagatcatccgccgcctcccggactcccggcagaccctgctcttctcc
gccacgctgcccaagctgctggtggagttcgcccgggccggactgacggaacctgtgctc
ttgcggctggatgtggacaccaagctgagcgatcagttacagctggccttcttccacctg
cgcatggacgagaagccggccctcctcctgcacctcctgcggaacgtggtcaagccccag
gagcagaccgtggtgttcgtcgctaccaagcaccacgtggagtatctgaaggagctgctg
atgtcagagggcgtggactgcgcctacatctacagcgctctggaccagacggcccgcaag
atcaacatcggccgcttcgtccaccgcaaggccatggtgctgctggtgacggacgtagcg
gcgcgcggtatcgacatccccctgctggacaatgtcatcaactacaacttcccctccaag
gccaagctcttcctgcacagagtcggtcgagtggcccgtgcggggaggagcggcacagcc
tacagcctggtgtgcaccgacgaggtcccgttcgtctacgacctccatctcttcctggga
cgtcccttacagctcgccctgcccgaacacccccaagatgccgacggggtgtttgggcgg
gtcccccagagcgtgctggacgacgaggaggcccagctcatcacggcccaccagaactcc
ctggacctgcagaacctgcgtcgcatcgcagagaacgcctacaagcagtacctcaagtcc
cggcccagcccctcccccgagtcattcaagcgggtcaagaacacggaactctccggaatg
gccgtgcacccgctgctcggctcggggttggagagcatggaacttgaccggctgaagatg
gtagacagcatcaagacctacaagtctaaagccacgatattcgagatcaactccagcagc
aagacggcggccagcgaggtcatgagggccaagaggagccgggacacgcgattggtggac
aagttccagcgggcgcgcgaggaccgggccgccaagggtctgatgaagtgccccgccccg
cccagacccgcccccgccgacccgggacacagcgagagcgaggaggaggacatccagggg
gtgttttccagagtggtgggggggaagaggaggaaaaacttggaggaggtggaggaagag
gtggagggggacgccgccgggccgaagacgaagaagacgaagaccaggggacctgtttgt
gatgaagagttctacatcccctacagacccaaagacttcaactcagagagagggctcagt
ttgggaggggaggggagcgcgtttgagctccaggcctcctccgctgtgctggacctgatg
ggggacgagggcgagcagctcaaccagcacaagagcatgatgaagtgggaccggaagaag
aagcggtttgtgcgggagaccggaaaagaggacaagaagaagaaagtgaggacggagagc
gggcaggtggtcagctcgaagaagaagaagagcttctatgaggagtggaagaagaagtac
aagatggacgacggaggctctgactctgagggagagacaggaggaaaggggaggaggccc
ggtggaggccgcagaggacggcggggcccccagcagcagcagcagcaggcggagcagaag
ggcggggcgcgggcgcggtcggagctgcgcagccgggagcagatcctgaagaacaggaag
cggcagcagaagcagcagttcctgcagagcggcgccctgaagaagctgcgcggtcgctcc
cggcaacggctcggagaggtcaagaagtcgggcttcggccgcggcgccacgaagaagggc
aagctgaggaagaggctgtga
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