Anguilla anguilla (European eel): 118212421
Help
Entry
118212421 CDS
T07545
Symbol
nup188
Name
(RefSeq) nucleoporin NUP188 homolog
KO
K14311
nuclear pore complex protein Nup188
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118212421 (nup188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aang03019
]
118212421 (nup188)
Messenger RNA biogenesis [BR:
aang03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118212421 (nup188)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup188_SH3-like
Motif
Other DBs
NCBI-GeneID:
118212421
NCBI-ProteinID:
XP_035246168
LinkDB
All DBs
Position
14:17561429..17579744
Genome browser
AA seq
1759 aa
AA seq
DB search
MTKVRALTGHVEGGKMAASKMCGRSSRELWTILLGRSALREPAQIEAELDRNWERLHLGL
CYYKTPSTLSADKLKADKNVTQPMKDFGLRISKLLGLDEQQSVQILECYLQEDYRGTRNT
MKSVLQDERQSQTLLLKIADYYYEERICLLRCVLLLLTFFQDERHPFRTEYSNCVSKLEK
DLVIKYQQQFETLFKAEAPTWETHGNLMTERQASRWFLQCLREQSLLLEILFVYYAYFEM
APADLLSLTKIFKEQGFGQRQTNRHLVDKSMDVLVDRIGYLSSLILVEGMDIDFLHKCAL
EDRTEQHQFSNCPDICKEMDQILLTFGDIPHHAPVLLAWVLLRHTLSPDESSAVVRRIGN
TSLQLAVFQYLTTMLQALGSSATNCTASTARMCVYGLISFVITSFEEETLGSQQHLINVA
CEVLAAPNLAELFWETKPTAGLGMILDSAVGMFPHKIGPLLQLLTALLSDKPTAKKVYSF
LDKMIFYTEVYKHKPSDIMSREDETLWRRQTPKLLYPLGLGQTNLRMPQGSLGQVVPGEQ
GYMVRWDYSYSSWTLFTCEIEMLLHVVSTADVIMHCERVKPILDLVHKVISTDWTVSDCL
LPITSRIYMLLQRLTSVINPPVDVIASCVSCLIVLAARMPGKVWSSLHHTGFLPFASTPL
TNMAQSISAEGMKAGNYGNLLVLIEQPRGEYAVTIAFLRLVTTLVKGQLGSTQNKGLVPC
VLLVLKEMLPTYHKWRYNTYGVRERIGYLILELIHAILNLSPEGESQGSTPSLQSLCIYS
LANTDAGQAVVNIMGIGVDTIDVVLAAQPSSGGSEGPGQILIQTVKLAFSVTNNVIRLKP
PSDVVSPLEQALTQHGGHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYAC
LGSDAAAIRDAFLIRLQSKTEDVRIKVMTLEFLTVAVETQPGLIELFLNLEVKDGPEGSK
EFLLGEWSCLQVVLDLIDSRQQGKYWCPPLLHRAAVAFLHALWQDRRESAISVLRTKEKF
WENLTTTLFGTLPPPSDTTEPCILETCAFVMKIIGLEIYYVVSGSLEQSLKDTLKRFSVG
KRYEYWSQYVKCLVCHMAETEEDEVRSFSECQMLISAWRMLLILSTSHSDVMLLTDDSTR
LKLFMDVLDGTKSALLVPMSVHCLRLGSMMATLLLILLKHWKSVVASAPDVLLPLSLILE
SIVQEDQQQMERTKAKVFSALISVLQIQGLSGGEISQLPQLLLCVCETVQDEALALMDST
RHVALAGDVPEDKDSMETDVAPRSLHQDQRDGVCVLALHLAKELCRVDEDGEHWPLVLRK
LPVLPSVLSALELSLRLKQNLYFTEAALHLLLTLARTAQGAVAVAGAGVIQSICLPLLSV
YEITGNGASQSSGFSRKSQDTPSWPGVYRLCMSLMESLLKTLRYNFVNEALDFVGVHQER
ILQCLNAVRTVQSLACLDEADHTVGFLLQLSSFCKEWQFHLPQLLQDVQVNLCYLCQTCT
YLLHSKKMLHHYLQTKNGDSLPPGPLSRAQRGSQTPSKQPAGAGVGERDEAEQKALLAVQ
CSLLKILSKTLATLQHFTPDCCQILLDQSLDLAEYRTLFVLSFTTPAFESDVAPSFGTLL
ATINVALSMLGEIEKKKEPASLSVGSLASSEETQALKSLLVFTMENCFYVLISQAVRYLK
DPTVHLRDKQRMKQELSSELSTLLSSLSRYFRRGSPSSPASGLLPSPQSKPSTPGSKGGP
EGQEPFIQLVQAFVRHVQR
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaggtgcgcgcattgacgggtcacgtggagggggggaagatggcggcctcgaag
atgtgtggaaggagcagtcgagagctatggaccatcctgctgggaagatcagcattgaga
gaaccggcccaaatcgaagcagaactggaccgaaattgggagcgcttgcacttgggattg
tgttactacaaaacacccagtacattgtcagctgacaagttgaaggctgataagaatgtt
acccaaccaatgaaagactttggcttgagaatcagtaaactcctgggtctggatgaacag
cagagtgtacagatattggaatgttacttgcaggaggattacagagggactcgcaatacc
atgaagtctgtcctacaggatgaaaggcagagtcaaaccctgctgttgaagattgctgac
tattactatgaggagcggatctgtctgttgcgctgtgtgctgctcctcctgaccttcttc
caggatgagaggcatccattcaggacggagtactccaactgtgtgagcaagttggagaag
gaccttgtgatcaagtaccaacagcagtttgagaccctgttcaaagctgaggcaccaaca
tgggagacccatggaaacctcatgacggagaggcaggcgtctcgctggttcctgcagtgt
cttcgggagcagtccctccttttggaaatcctctttgtgtactatgcctacttcgagatg
gcaccagcagacctgctctcccttaccaagatcttcaaggaacaaggttttggacaaagg
cagacaaacagacatctggtagacaagagtatggatgtgctggttgatcggattgggtac
ctaagttctctgatcctggtggaggggatggacattgatttcctgcacaagtgtgctctt
gaggatcgcacagagcagcaccagttttcaaattgtcctgacatctgcaaagagatggac
cagattctgctgactttcggagacatcccgcaccacgccccggttctgttggcttgggtt
ctgctgcggcacaccctcagcccagatgaatccagtgctgttgtgcgtcggatcggcaac
acttccctgcagctcgctgtgttccagtacctgaccaccatgctccaggcgctgggtagc
agtgccaccaattgcacggccagtacggcgcgcatgtgtgtttacggactcatctccttc
gtcatcacctcctttgaagaggaaacccttggaagccagcagcacctgataaacgtggcg
tgtgaagtcctcgctgctcctaacctggctgagctcttctgggagactaagccgacggcg
ggactggggatgatcctggacagcgctgtggggatgttccctcacaagatcggcccgctt
ctgcagctgctgaccgcactgctgtctgacaagcccaccgccaagaaggtctacagcttt
ctggacaagatgatcttctacacggaggtgtacaaacacaagcccagtgacatcatgtcc
cgggaggacgagaccctgtggcgcaggcagacccccaagctcctctacccgctcggtctg
ggccagaccaatctgcgcatgcctcagggctccctgggtcaggtggtccctggggagcag
ggctacatggtgcgctgggattactcctacagctcctggacgctgttcacctgcgagatc
gaaatgctgctgcacgtggtctccactgcggacgtgatcatgcactgcgagagggtgaag
cccatcctggacctggtgcacaaggtgatcagcaccgactggaccgtgtctgactgcctc
ctgcccatcacctcccgcatctacatgctgctgcagagactgacctcggtgataaacccc
cctgtggatgtgatagcctcctgtgtgagctgcctgattgtgctggctgcacggatgcct
gggaaggtttggtccagcttacaccacactggcttccttccattcgcctccacccccctc
accaacatggcgcagtccatcagtgctgagggcatgaaggccggtaactatggcaacctg
ctggtgctgatcgagcagcctcggggcgagtacgcggtgaccattgctttcctgcgcctc
gtcaccaccctcgtcaagggccagctgggaagcacccagaacaaaggcctggtcccctgt
gtgctgctggtgctgaaggagatgctgcccacctaccacaagtggcgctacaacacctat
ggagtgagagagaggataggctacctgatcctggagctcatccatgccattcttaacctg
agtcctgaaggagagtcgcagggaagcacccccagtctgcagtccctctgtatctacagc
ctggccaacactgacgcaggccaggcagtggtgaacatcatgggaatcggggtggacacc
atcgatgtggtgctggcagcccagcccagcagcggtgggtctgagggtccaggccagatc
ctcatccagacggtgaaactggccttctccgtcaccaacaacgtgatccggctgaagcct
ccgtctgacgtggtgtcgccgctggagcaggctctgacacagcacggtggccatggcaac
aacctgattgcagtcctggcgaagtacatctaccataaacacgacccagctctgccgcgg
ctcgccatacagctgctgaagagactcgccacggtggcccccatgtcagtgtacgcgtgc
ctgggcagtgacgcggcagcgatccgagacgctttcctgatcaggctgcagagcaagacc
gaggatgtgcgcatcaaggtcatgaccctggagtttttgactgttgctgtggaaacgcag
cctggcctaattgagcttttcctcaacctggaagtaaaagacgggcctgaggggtcaaag
gagttcctgctgggggagtggagctgtctgcaggtggtgctggacctgatcgactccagg
cagcaggggaagtactggtgccccccgctgctgcaccgggctgcagtggccttcctccac
gccctgtggcaggaccggcgagagagcgccatctcagtgctgcggaccaaagagaagttt
tgggaaaatctgacgacgactctttttggaactcttcctcccccttcagacacaacagag
ccttgcattcttgaaacatgtgcctttgtcatgaaaatcattggcctggaaatctactac
gtggtcagtggctccctggagcagtctctgaaggacacgctgaagaggttctctgtgggg
aagcgttatgagtactggtcccagtacgtcaaatgcctggtgtgccacatggcggagacc
gaggaggatgaggtccgctccttctccgagtgccagatgctcatttccgcttggagaatg
ctgctcatcctctccaccagccactcggatgtgatgctgctgacagacgactccacccgg
ctaaagctcttcatggacgtgttggacggcaccaaatctgctctgctggtgcccatgtca
gtgcactgcctgcgcctgggctccatgatggccacactgctgcttatcctgctcaaacac
tggaagagcgtggtggcgtcggcccctgatgtgctgctgccgctctctctgatcctggag
agcattgtgcaggaggaccagcagcagatggagaggaccaaggccaaagtgttctccgct
ctcatctccgtcctgcagatccagggcctcagcggtggcgagatttcccagctgccccag
ctcctgctgtgcgtgtgcgagacggtgcaggacgaggccctggccttgatggacagcacg
cgtcacgtggctctggcgggggacgtccctgaggacaaagacagcatggagacggacgtg
gctccgcggagcctgcatcaggaccagagagacggggtgtgtgtgctggcgctgcacctg
gcgaaggagctgtgcagggtggatgaggacggggagcactggccgctggtgctgcgcaag
ctgccggtcctgccctcggtgctgagcgccctggagctgagcctgcggctcaaacagaac
ctgtacttcactgaggctgcgctgcacctgctgctcacgctcgcacgtaccgcacagggc
gcagtggcggtggcgggtgctggtgtgattcagagcatctgcctgcccctgctgagcgtg
tacgagatcaccggcaacggagcctcgcagagctccggcttctcccggaagtcccaggac
acgccctcctggcccggggtgtaccggctctgcatgtccctgatggagagcctgctcaag
acgctgcgctacaactttgtgaacgaggcgctggactttgtgggcgtccatcaggagcgc
atcctgcagtgtttgaatgcggtgcggaccgtgcagagcctggcctgtctggatgaagcg
gaccacaccgtgggcttcctgctgcagctgtccagcttctgtaaggagtggcagttccac
ttaccgcagctcctgcaagatgttcaggtgaatctgtgttacctgtgccagacctgtaca
taccttctgcacagcaagaagatgctgcatcactatctccagacgaagaacggtgactca
ttaccccccggacccctgtcccgggcccagcgggggtcccagaccccctccaagcagccg
gcgggggcgggggttggggagcgcgacgaggcggagcagaaggccctgttggccgtgcag
tgcagcctcctgaagatcctcagcaagacgctggccaccctgcagcacttcacccccgac
tgctgccagatcctgctggaccagtctctggacctggcggaataccgcaccctgtttgtg
ctgagcttcaccacgccggcctttgaatcagacgttgccccttcgtttggaactctcctg
gccaccatcaatgtggccctgagcatgctgggagagattgagaagaagaaagagccagcg
tccctaagtgttgggtctttggcctcatctgaagaaactcaagctctgaaatcactgctg
gtttttaccatggagaactgcttctacgtgttgatctctcaggcggtgcgatacctgaag
gaccccacagtgcacctgagagacaaacagaggatgaagcaggaactcagctcagagctg
agcacgctcctgtccagtctgtcccgttacttccgccgtgggtctccctcatctccagcc
agtgggctgctcccctccccccagagcaagccgtctaccccaggctctaaagggggtccc
gagggccaggagcccttcatccagctggtgcaggccttcgtccggcacgtccagagatag
DBGET
integrated database retrieval system