Anguilla anguilla (European eel): 118212527
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Entry
118212527 CDS
T07545
Symbol
prpf4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118212527 (prpf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aang03041
]
118212527 (prpf4)
Spliceosome [BR:
aang03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
118212527 (prpf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
PRP4
Beta-prop_EML
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
WD40_like
WD_LRWD1
Beta-prop_WDR11_1st
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
118212527
NCBI-ProteinID:
XP_035246358
LinkDB
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Position
14:24571183..24580330
Genome browser
AA seq
507 aa
AA seq
DB search
MSDDEDVPVAKKTRIFYGSLEEKERERLAREGSASSGREAVKAGIEAGNINISSGECMEM
EERVSERQAEVLAEFERRKRARQITVSTDDAEVKACLRALGEPITLFGEGPAERRERLRN
ILSVVGPDALKKSKKEDEKGKRSQEECQQTWYHEGPTSLKEARLWLARYSLPRAVKRLDA
ARAQKEIPESSRTVRQQELHKTLRGLNNFCSQIGDERPISSCQFSPNSKLLVTASWSGLC
KLWAVPDCSLVRTLRGHNTNVGAISFHPQATLSLDAADVNMASCATDGSVKLWSLDSDEP
VADIEGHSMRVARVAWHPSGRFLGTTCYDNSWRLWDLEAQEEILHQEGHSKGVHDLHFHP
DGSLAGTGGLDSFGRIWDLRTGRCVMFLEGHLKEIYAIDFSPNGFHVATGSGDNTCKVWD
LRQRKCIYTIPAHQNLLSSVKFQPTDGHYLLTGAYDNTAKVWTHPGWSPLKTLAGHEGKV
MGLDVSADGQLIATCSYDRTFKLWVSE
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgacgaggatgtccccgtggcgaagaaaacccggattttctatggcagcctg
gaggagaaggagcgggagcggctggcccgcgagggttcggccagctccggcagggaggcg
gtgaaggcggggattgaggccggcaacatcaacatctccagcggcgaatgcatggagatg
gaggagcgtgtcagcgagcggcaggcggaggtgctggctgagtttgagcgcaggaagcgg
gcgcggcagatcaccgtctccaccgacgacgccgaggtgaaagcctgcctgcgggctctg
ggagagccaatcacgctcttcggggaggggcctgctgagagacgagagaggttgaggaac
atcttgtctgtggtgggaccagatgccctgaagaaatccaaaaaggaagacgagaaaggg
aagcgctctcaagaagagtgccagcagacctggtaccatgaaggccccacctctttaaag
gaagctcgtctgtggttggctcgctactctctgcccagggccgtgaagaggctggatgca
gctcgcgctcagaaggagatccccgagtcttcccggaccgtgcgtcagcaggagctccac
aagacgctgaggggcctgaataacttctgcagtcagattggggacgagagacccatctcc
tcctgccagttcagccccaactccaaactgctggtgacggcgtcctggagtggtctctgt
aagctctgggcagtccctgattgcagcctcgtccgcactttaaggggacacaacaccaac
gtgggggccatcagtttccacccccaggccacactgtctctggacgccgccgatgtcaac
atggcctcttgtgcgactgacggatcagtcaagctctggagtctggacagcgatgagccg
gtggccgatatcgaggggcactcgatgcgggtggcacgcgtggcctggcacccctccggg
cgcttcctgggcaccacctgttatgataactcctggaggctgtgggatctggaggcgcag
gaggagatcctccaccaggagggccacagcaagggggtgcacgacctgcacttccacccc
gacggctcccttgcagggaccgggggtctggactcgttcggccggatctgggacctgcgg
acggggcgctgcgtcatgttcctggagggccacctcaaagagatctacgccatcgacttc
tcgcccaacggctttcacgtggcgacaggaagtggagataacacctgcaaggtctgggac
ctccggcagaggaagtgcatctacaccatccccgctcaccagaaccttctgtcctcagtg
aagttccagcccactgacggtcactacctgctgacgggagcgtacgacaacacggccaag
gtgtggacgcaccccggctggtccccgctcaagacgctggcggggcacgaggggaaggtg
atggggctggacgtgtcggccgacggacagctcatcgccacctgctcgtacgaccgcacc
ttcaaactctgggtctccgagtga
DBGET
integrated database retrieval system
