Anguilla anguilla (European eel): 118212561
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Entry
118212561 CDS
T07545
Symbol
nup54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118212561 (nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aang03019
]
118212561 (nup54)
Messenger RNA biogenesis [BR:
aang03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118212561 (nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
LPP
Motif
Other DBs
NCBI-GeneID:
118212561
NCBI-ProteinID:
XP_035246429
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All DBs
Position
14:complement(20930079..20944555)
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AA seq
622 aa
AA seq
DB search
MAFNFGGGATNTASSSGFSFGSFAAKTTASTGFGFGTTTTTASSGFGSLAAPGFGATTTT
APSTGFGFGSTTTGFGGLGAGSTTAGGFSFGGFGLNSNAASVSFNVGNFGAATTAATVFS
FGNSLGSAGAFGGFGTATTSAAPGSTFSFAAPSNTGGLFGNTQNKGFGFSGLGAGTTAGT
GFGTGLGTGLGTGLGAGLGTGLGFGGFNIQPQQQQGGLFGQQAQASAQSNQLINTASALS
APTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIAPVEFTQENPFCRFKAVGYSCAPGSK
DEDGLVVLALNKKEVDVRSQQQQLVESLHKLLGGHQTLTVNVEGVKALPDDQTEVVIYVV
ERSPNGTSKRIPATTLFSYVEQANIKPQLQQLGVVMSVTRTELSPAQLKQLLQNPPAGVD
PIIWEQAKVDNPDPEKLIPVPMVGFKELLRRLKIQDQMTKQHQTRVDIISNDVSELQKNQ
ATTVAKIAQYKRKLMDLSHRVLQVLIKQEIQRKSGYAIQVDEEHLRVQLDTIQSELNAPT
QFKGRLNELMSQIRMQNHFGAVRSEERYSVDAELLREIKQHLKQQQEGLSHLISVIKDDV
EDIKLIEHGLHDSVHMRGGMLS
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcaactttggcggtggtgctaccaatactgcgagctcttcaggattttcattt
ggttcatttgctgccaaaacaacagcctctactggttttggctttggcaccaccaccacc
actgcctcatctggatttggtagtcttgccgccccagggttcggggccaccaccacaacg
gctccttccactggctttggtttcggttccacaactacaggatttggggggctgggagcc
ggcagcaccaccgccggtgggtttagttttgggggtttcggattaaattcgaacgcggca
tcggtcagctttaatgtggggaattttggtgcagccaccactgcagctacagttttcagt
tttggcaatagcctgggtagcgcaggtgcatttggaggctttgggacggccactacttct
gccgcaccggggtctactttcagtttcgctgctccctcaaacacagggggtctgtttgga
aacacccagaataagggctttggcttctcggggctgggggccggtaccactgccgggact
ggtttcggcactggcctcggaaccggcctcggtaccggtctcggagccggccttggaacc
ggtctcgggtttgggggcttcaacatccagccacagcaacagcaggggggattatttggc
cagcaggcccaggcgtctgcccagtccaaccagctgatcaacacagccagcgccctgtcc
gcgcccacgctgctgggggacgagcgcgatgccatcctggccaagtggaaccagctccag
gccttctggggcactggcaagggctatttcaacaacaacatcgcacctgtcgagttcaca
caggagaaccccttctgcaggttcaaggcagtgggctacagctgcgctccaggcagtaag
gatgaggacggcctggtggtcctggctctgaataagaaggaggtggacgtgcgcagtcag
cagcagcagctggtggagtcgctacataagttgctgggaggacaccagaccctcactgtc
aacgtggagggggtcaaagcactgcccgacgaccagacggaggtggtcatatacgtggtg
gagcgctctccgaacggcacctccaagaggatcccggccaccacgctcttcagctacgtg
gagcaggccaacatcaaaccgcagctgcagcagctgggcgtggtcatgtccgttacgcgc
acagagctgtcgcctgcgcagctgaagcagctgctgcagaacccgccagccggtgtggat
ccaattatatgggaacaggcgaaggttgacaaccctgatcctgaaaagttgattccagtt
ccgatggttggtttcaaagaactacttcgcagactcaagatccaggaccagatgacaaag
cagcaccaaactcgtgttgatataatctccaacgacgtaagtgagttacagaagaatcag
gctacgacagtggcgaagatcgcacagtacaagaggaagctgatggacctttctcacaga
gtactacaggtcttgattaagcaggagattcagaggaagagtggctatgccatccaggtg
gatgaggaacatctgcgggtgcagctggacaccattcagtctgaactcaatgcccccact
cagtttaagggccggctgaacgagctcatgtctcagatccggatgcagaaccacttcggt
gcggtgcggtccgaggagcgctacagcgtggacgccgagctgctgcgcgagatcaagcag
cacctgaaacagcagcaggagggcctgagccacctcatcagcgtcatcaaggatgacgtg
gaggacataaagctgatcgaacacggtctccacgacagcgtgcacatgaggggcggcatg
ctcagctga
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