Anguilla anguilla (European eel): 118213261
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Entry
118213261 CDS
T07545
Symbol
chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
aang
Anguilla anguilla (European eel)
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aang03021
]
118213261 (chd1)
03036 Chromosome and associated proteins [BR:
aang03036
]
118213261 (chd1)
Transcription machinery [BR:
aang03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
118213261 (chd1)
Chromosome and associated proteins [BR:
aang03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
118213261 (chd1)
SLIK complex
118213261 (chd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
HDA2-3
DEAD
CHDCT2
Motif
Other DBs
NCBI-GeneID:
118213261
NCBI-ProteinID:
XP_035247988
LinkDB
All DBs
Position
14:3373887..3411537
Genome browser
AA seq
1846 aa
AA seq
DB search
MDGRSEEDSVSNSSAESSNSDDESGSGSGSGSGSGSSSSSSSSSSQSGSSDSGSGSDSGS
QSDSDSEKSKEKSQPENKPAKIDGAEFWKSNPSILAVQRSAMLRKQQLQQQQQQQQQPQN
QQQSSSDSGSDEDSSSSDDSDDDSSNQTKRKRKHKGSDSGSDSGSGSGSDSSSGSGSGSD
SSDEAENSDETVSDYEPSHKVKSRKPTNKASVRNGKKGKAQRKKTSGSGSGSSSDEDEFD
KAKLSGPRRQATVNVSYKEDEEMKTDSDDLVEVCGEDVPQPEEDEFETLEKVMEMRTGRR
GATGGTTTVYAVEADGDPNGNFNPAKEPGEHQYLIKWKGWSHIHNTWETEETLKLQNVKG
MKKLENFKKKEQEKRKWIKAASPEDVEYYNCQQELMDDLHSQYQIVERIIAHSNQKSAAG
YPDYLCKWQGLSYSECSWEDGALLSRKFQRCIDDYMCRNQSKTIPSRDCKVLKQRPRFVP
MKKHPTYIGGEGLELRDYQQDSLNWMAHSWCKGNSCILADEMGLGKTIQTICFLSYLFNE
HQLYGPFLLVVPLSTLTSWQREIQLWAPHMNVVVYLGDISSRSMIRTHEWMHPQNKRLKF
NILLTTYEILLKDKSFLGNVNWAFIGVDEAHRLKNDDSLLYKTMMEFKSNHRLLITGTPL
QNSLKELWSLLHFIMPEKFHSWELFEQDHGKGRDSGYTSLHKELEPFLLRRVKKDVEKSL
PAKVEQILRVEMSAIQKQYYKWILTRNYKALSKGTKGSTSGFLNIMMELKKCCNHCYLIK
PPEDNEFYNKAEALQHLIRSSGKLILLDKLLLRLKDRGHRVLIFSQMVRMLDILAEYLKS
RQFLFQRLDGSIKGEMRKQALDHFNAENSEDFCFLLSTRAGGLGINLASADTVVIFDSDW
NPQNDLQAQARAHRIGQKRQVNIYRLVTKGSVEEDIIERAKKKMVLDHLVIQRMDTTGKT
VLHTGSAPSSSTPFNKEELSAILKFGAEELFKEQEGEEQEPQEMDIDEILKRAETRENDP
GPSTVGEELLSQFKVANFSMMEEEEMDMDSDRNHRGWEHIIPEEQRRRLEEEERQKELEE
IYLLPRMRNCAKQVNFNGNEGRRSRNRRYSGSDSDSVSDRKRPKKRGRPRTIPRENIKGF
SDAEIRRFIKSYKKFGGPLERLDAIARDAELVDKSEYDLKRLAETVHNGCIKTLRENPCG
PEKTSGGRRGKVKGPTFRISGVQVNAKLVISHEEELAPLHKSIPADPEERKRYTIPCHSK
AAHFDIDWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLNLTHKLLPDDPDKKPQAKQLQTR
ADYLIKLLSRDLAKKEAQRQAGTANSRKRKPRNKKNKVVKPKVEEVVKSDSSPTPSEKSS
EEEEEEEEEEEEEKEEEKEVLPLKTSSRRAKVERVAKEPEEDPVPEVVPKKEPEEKEIKE
KEIKKEGKKEKKEEVRETKDKKEAKKKEEKEAKPVEPAYRKEDIKEEKITEVKVEIRESK
SKKAADTPVHITASGETVPASEESEELDQKTFSVCKERMRPVKAALKQLDRPEKGLSERE
QLEHTRQCLIKIGDHITECLKEYSNPDLIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIK
KRQENAQAADHNTSTVNTTHSFKHTDVERLKDNSQHDDSSRDSYSSDRHHSSRYAEHGKD
RHAPDPYRKGSDSRDSRKRPYPSFSNGKDHRERDRDRDRDRDHYRSERPDSRYYSDKHRK
MDDLRSGRDHRLEGGAKERSHGDRRSHSSDRRSGSDYAHHKSSRDYRYHSDWQMDHRASG
SGPRSPRDQRSPYESRSPPGHRSRSPFEYSSDHKSTPEQVWCGRKT
NT seq
5541 nt
NT seq
+upstream
nt +downstream
nt
atggatgggcgtagcgaggaggacagtgtgagcaacagcagtgcagaatcaagtaactct
gacgacgagtccgggtccgggtcggggtctgggtccgggtcggggtccagctccagcagc
agcagcagcagcagccaatcgggaagcagcgactcggggagcgggtcggactccggcagc
cagtcggactccgactcggagaagtccaaggagaagagccagccggagaacaagcccgcc
aagatcgatggggcggagttctggaagtcgaaccccagtatcctggctgtacagcggtcg
gccatgctcaggaaacagcagctccagcagcagcagcagcagcagcaacagccacagaac
caacagcagagctcttctgacagtggctcagatgaggattcgtccagcagcgatgactcg
gacgatgactcctccaatcagacgaagaggaaaagaaagcacaagggatcggactcgggg
tctgattccggttccgggtccggttctgactccagctcggggtccgggtccggctcggac
tcctcggacgaagccgagaactcggacgagaccgtctctgactacgagccgagccacaaa
gtcaagagcaggaagcccactaacaaggccagcgtccgaaacggaaagaagggcaaagcc
cagcggaaaaagacctcgggttcgggctcggggtcgtcctccgacgaggacgagttcgac
aaggccaagctgtcgggcccccgtcgccaggcgaccgtcaacgtgagctacaaggaggac
gaggagatgaagacggactcggacgacctggtggaggtgtgcggggaggacgtcccgcag
cccgaggaggacgagttcgagaccctggagaaggtgatggagatgaggaccgggaggaga
ggagccacggggggcaccaccacggtctacgcggtggaggcggacggggaccccaacggg
aacttcaacccggccaaggagccgggcgagcaccagtacctgatcaagtggaaggggtgg
tcccacatccacaacacctgggagaccgaggagaccctcaagctgcagaacgtcaagggc
atgaagaagctggagaacttcaagaagaaggagcaggagaagaggaaatggataaaagca
gcttccccggaggatgtggaatactacaactgtcaacaggagctaatggatgacctgcac
tcgcagtaccaaatcgtggaaagaataatcgctcattcgaaccagaagtctgccgcgggt
tacccggactacctgtgcaagtggcagggcctgtcctactcggagtgcagctgggaggac
ggggcgctcctttccagaaagttccagaggtgcatcgacgactacatgtgcaggaaccag
tccaagaccatcccgtcccgggactgcaaggtgctgaagcagaggccgcggttcgtgccc
atgaagaagcatccgacctacatcggcggagagggcctggagctgagggactaccagcag
gacagcttgaactggatggcccactcctggtgcaagggaaacagctgcatcctggcggac
gaaatgggcctgggcaagaccatccagaccatctgcttcctcagctacctgttcaacgag
caccagctgtacgggcccttcctgctggtggtgcccctgtccaccctcacctcctggcag
agggagatccagctgtgggccccccatatgaacgtggtggtgtacctgggcgacatcagc
agccgcagcatgatcagaacgcacgaatggatgcacccacagaacaagcgactgaagttc
aacatactgctaaccacgtatgaaatcctgctcaaagacaagtcattcctgggaaatgtg
aactgggccttcatcggagtggacgaggcccatcggctgaagaacgacgactccctcctg
tacaagaccatgatggagttcaagtccaaccaccgcctgctcatcaccggcacgccgctg
cagaactcgctgaaggagctctggtccctcctgcacttcatcatgcccgagaagttccac
tcctgggagctgtttgagcaggaccacggaaaggggcgggactcgggctacaccagcctc
cacaaggagctggagcccttcctcctgcgcagggtgaagaaggacgtggagaagtctctc
cccgccaaggtggagcagattctcagggtggagatgagcgccattcagaagcagtactac
aagtggatcttgacccggaactacaaggccctgagcaaaggcaccaaagggagcacgtcg
ggcttcctcaacatcatgatggagctgaagaagtgctgcaaccactgctacctcatcaag
ccgcccgaagacaacgagttctacaacaaggccgaggccctgcagcacctgatccgcagc
agcgggaagctgatcctgctggacaagctgctgctccggctgaaggaccggggtcaccgc
gtgctcatcttctcccagatggtccgcatgctggacatcctggccgagtacctgaagagc
aggcagttcctcttccagagactggatggctctataaaaggagagatgaggaaacaagcc
ttggatcatttcaatgcggagaactctgaagatttctgcttcctgctctccacgcgcgcc
gggggtctggggatcaacctggcctccgccgacaccgttgtcatcttcgactccgactgg
aacccccagaacgacctgcaggcccaggcccgggcccacaggatcgggcagaagagacag
gtgaacatctacaggctggtgaccaagggatcggtggaggaggacatcattgagagggcg
aagaagaagatggtgctggaccacctggtcatccagcgaatggacacgaccgggaagacc
gtcctccacactggctccgccccctccagttccaccccattcaacaaggaggagctgtct
gccatcctcaagtttggtgccgaagagctgttcaaagagcaagaaggagaggagcaggaa
cctcaggaaatggacatcgatgagatcctgaagcgagcagaaaccagggagaatgacccg
ggcccctctactgtaggggaggagctgctctctcagtttaaggtggccaacttctccatg
atggaggaggaggagatggacatggactcggaccgtaaccaccggggctgggagcacatc
atcccggaggagcagaggaggaggctggaggaggaggagcggcagaaggagctggaggag
atctacctcctgccccgcatgaggaactgtgccaaacaggtgaacttcaacgggaacgag
ggcaggcggagcaggaaccggcggtattcggggtcggacagcgactccgtctccgaccgc
aagcgccccaaaaagcgggggcggccgcggaccatcccgcgcgagaacatcaaagggttc
agcgacgccgagatccgcagatttatcaagagctataagaagtttggcggcccactggaa
aggctggacgcgatcgctcgcgacgcggagctggtggataagtctgagtacgacctgaag
aggctggcagagactgtgcacaacggctgcatcaaaacgctgagagagaacccctgtggg
cccgagaagacctcaggaggccggcgggggaaagtcaagggccccactttccggatttcg
ggggtccaggtgaacgccaagctggtgatctcgcacgaggaggagctggcgcctcttcac
aagtccattcctgctgaccccgaggagaggaagaggtacaccatcccgtgccattcgaag
gcggctcatttcgacatcgactgggggaaggaggacgactcgaacctgctgataggaatc
tacgagtacggctacggaagctgggagatgatcaagatggaccccgacctcaacctcact
cataagctcctgccggacgaccctgataagaagcctcaggccaagcagctgcagacccga
gcggactacctcattaagttattgagcagggatctggccaagaaggaggcgcagagacag
gcgggaacggccaactcccgcaagaggaaacccaggaacaagaagaacaaggtggtgaag
ccgaaggtggaggaggtggtgaagagcgactcctcaccaacgccgtcggaaaagagctcg
gaagaagaggaggaggaggaggaggaagaggaagaggagaaggaagaagagaaggaggtg
ctgccgctgaagacctccagcaggagggccaaggtggagcgggtggccaaggagccggag
gaggacccggtgcccgaggtggtgcccaagaaggagcccgaggagaaggagatcaaagag
aaggagatcaaaaaggagggcaagaaggagaagaaggaggaggtccgcgagacgaaggac
aagaaggaagcgaagaagaaggaggagaaggaggccaagcccgtggaacctgcctacagg
aaggaggacatcaaagaggagaagataaccgaggtgaaggtggagatccgggagtcgaag
tcgaaaaaggcggcggacactccggtgcacatcacggccagcggggagaccgtccccgcc
tctgaggagtccgaggagctcgaccagaagaccttcagcgtgtgtaaggagcgcatgcgt
ccggtgaaggccgccctgaagcagctggaccggccggagaagggcctgtcggagcgggag
cagctggagcacacgcgccagtgcctcatcaagatcggggaccacatcaccgagtgtctg
aaggagtactccaaccccgacctgatcaagcagtggaggaagaatctgtggatatttgtg
tcaaagtttaccgaatttgacgccaggaagttgcacaagctgtacaagcacgcgattaag
aaacgacaggaaaacgctcaggcagcggaccataacactagtactgtaaatacaacccac
agctttaaacacacagacgtagagcggttaaaggacaactcgcagcacgacgacagcagc
agggacagctacagctccgacagacaccactcgtcccgctacgcggagcacgggaaggac
cggcacgcccccgacccgtaccggaagggcagcgactcgcgagactcccgaaagaggccg
tacccctccttcagcaacggcaaggaccaccgggaacgggaccgggaccgggaccgagat
cgggatcactaccggtccgagaggcccgacagcaggtattacagcgacaagcacaggaag
atggacgacctccggtccggccgcgaccaccggctggagggcggcgcgaaggagcgctcg
cacggcgaccgccgctcgcactcctccgaccgccggtccggctccgactacgcgcaccac
aagtcctcccgcgactaccgctaccactcggactggcagatggaccaccgggcgtcgggc
agcggcccgcgctcgccccgggaccagcggtcgccgtacgagtcccgctcgccgccgggc
caccgctcgcggtcgccgttcgagtactcgtccgaccacaagagcacccccgagcaggtg
tggtgcggccgcaagacataa
DBGET
integrated database retrieval system
