Anguilla anguilla (European eel): 118213282
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Entry
118213282 CDS
T07545
Name
(RefSeq) syndecan-1-like
KO
K06257
syndecan 1
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang04512
ECM-receptor interaction
aang04514
Cell adhesion molecule (CAM) interaction
aang04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118213282
04514 Cell adhesion molecule (CAM) interaction
118213282
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118213282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aang04131
]
118213282
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
aang04090
]
118213282
00535 Proteoglycans [BR:
aang00535
]
118213282
Membrane trafficking [BR:
aang04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
118213282
CD molecules [BR:
aang04090
]
Proteins
118213282
Proteoglycans [BR:
aang00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
118213282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
Romo1
Motif
Other DBs
NCBI-GeneID:
118213282
NCBI-ProteinID:
XP_035248034
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All DBs
Position
1:complement(79845551..79854260)
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AA seq
444 aa
AA seq
DB search
MRMQVTALLLVCLGAWIRTAESGLTEEFDASTAYPEDQDGSGDDLEISGSGAGDEGPNVP
DFSTTAAPATNETEQVAVVTENEGVPDEVAGETTTTATTTITTMTSEAPPTEGTPATAVP
AVDVGATDVGATDATTTTAATTTTTQAPVDPDVAVDPFDTTHAPADPAVATTAAPTETPT
TTAAPEQSAAPGFPWELPEDPLRETTQAAPVTTEAADTPPRVMGTSVPEATEAGPAETAQ
PAILTTQSSPTTAAPPVAVDTGVEVSTETPVLPEEEEEEEEEEEEEETPPAPTEKTDLLP
ASTPALGTELDSSQDEMASGDDATDSPLATESAGPPGAPNGVDEEVIVPQSRGNVNKEIP
DDSDMTFVSEPEGAFSENQSLLERKEVLGGVIAGGVVGLAFAIMLVSLMVYRMKKKDEGS
YSLDEHKHPNGGYQKARREEEFLA
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgcaagtaactgccttactacttgtctgcctgggcgcttggattcgtacagct
gaatcggggctgaccgaggagtttgatgccagtaccgcgtaccccgaggaccaggatggg
tccggagacgacctggagatctcgggatcgggggccggagacgaaggacccaacgtgcca
gacttctccactaccgcggctccggcgaccaacgagaccgagcaggtcgccgtggtgacc
gagaacgaaggcgttccggacgaggtcgccggggagacgacgacgacggcgacgacaaca
ataacaacaatgacctctgaggccccccccaccgagggcacacccgccaccgctgtgccc
gccgtcgacgtgggtgccaccgacgtgggtgccaccgacgcgaccaccaccaccgccgcc
accaccaccaccacccaggcacccgtcgaccccgacgtggccgtcgacccctttgacacc
acccacgcgcccgccgaccccgcggtggccaccactgcagccccgaccgaaacccccacc
accactgccgcgcccgagcagtccgccgcgcccgggtttccctgggagctgcccgaggac
cccctgcgggagaccacccaggccgcccccgtcaccaccgaggcggcggacacgccccct
cgcgtgatgggcacctccgttcccgaggcgaccgaggccggccccgcggagaccgcgcag
cccgccatcctcaccacccagagttcccccacgaccgcggcgccccccgtcgccgtggac
accggcgtcgaggtttccaccgagacccccgtcctgcctgaggaagaggaagaggaagaa
gaggaggaggaggaggaggaaaccccccccgcccccaccgagaagaccgacctgctcccg
gcctccacccccgccctcgggaccgagctggacagctctcaggacgaaatggcgtccggc
gatgacgccaccgattcgccgctggccacggagtccgcgggaccccccggcgccccgaac
ggcgtagacgaggaggtcatcgtcccacaatccagaggcaacgtgaataaggaaatcccc
gacgactctgacatgaccttcgtatctgagcccgagggggcattctcggagaaccagagc
ctcctggagaggaaggaggtgctcggaggtgtgatcgccgggggggtggtgggcctggcc
tttgccatcatgctggtgtcgctcatggtgtaccggatgaagaagaaggacgaaggcagc
tactcgctggacgaacacaaacaccccaacgggggctaccagaaagcccggagagaggag
gagtttctggcgtag
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