Anguilla anguilla (European eel): 118213909
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Entry
118213909 CDS
T07545
Name
(RefSeq) collagen alpha-3(VI) chain-like isoform X1
KO
K06238
collagen type VI alpha
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang04510
Focal adhesion
aang04512
ECM-receptor interaction
aang04518
Integrin signaling
aang04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118213909
04518 Integrin signaling
118213909
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118213909
09142 Cell motility
04820 Cytoskeleton in muscle cells
118213909
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aang04147
]
118213909
00536 Glycosaminoglycan binding proteins [BR:
aang00536
]
118213909
Exosome [BR:
aang04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118213909
Glycosaminoglycan binding proteins [BR:
aang00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118213909
Hyaluronan
Extracellular matrix or blood plasma proteins
118213909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
Kunitz_BPTI
VWA_3
fn3
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
118213909
NCBI-ProteinID:
XP_035249029
LinkDB
All DBs
Position
15:23502327..23621841
Genome browser
AA seq
3159 aa
AA seq
DB search
MRKRWFLSFCALLCVAISGLVPDTHAQDDGRPALAADIYFLVDSSWSIGQENFQYVRQFL
FSAVKTLSEWSDGFRFALVQYSGSPKTEFRLNTYQAPQDVLAHIRSLAYRGGGTRTGRGL
DFLIKNHLTVASGSRAAEGVQQVVVVLTDGRSQDDVAPPSSVLKMAGVDVFAVGVQDAAM
WELREMASAPLDMHVYNVDSFTALSNIVQDLVVNLGAAAGFPVAAEATGIIQDVTAQESA
DLVFLIDGSENVGAANFPQVRDLALSIVERLDVGRDAIRVAVILYSADPEVQFYLNSYDS
KTAVMDAIKGLSFTGGEEANLGAALQEVADTLLTPQAGGRSEDGVPQAVVVISAGASSDD
LSLGDRALKQASVFVFGVAAGDESTVQLEGIATDRSFVLSAPSVNTVATLGDQLLPYING
VAQRTIVLHTEVIEDVAVERRDIIFLIDGSQNMGGTHFNAIREFIKKFVDIMPIGPDQVQ
VGVAQFTNTPKLEMDLNTHSTKESLSTAVGKMRIKGGTQEVNIGAALDFVRTQMLRADKG
SRIGQRVPQLVLLFSAKKASDTVAQQATDLHRMGVLTMAAGSKNADEEELKTIAFDKSLV
FMLKDFRGLARNPTMLISPLSTISGVVVTERPTESIEITTVETQRIIRDIVFLVDGSDYV
GEAGFAHVRDFISRIVNQLDVRPERVQIALMQFAREQRTEFYLSTYNNKKDVLDAVARIR
PMGGDVIYTGAALEFALENLFQPSAGSRRRQGVPQAVVLITGGPPQDEVKRVADKVAVEG
VLTYTVGAGQVDENILKTVAFVPTLAYYVSRFDDLTSVVENIMTPLITVVGDTDTIITEV
ETTEGKRDVAFLIDGSDAVGSDFQYIKDFILNVIEPLNVGIDNVRVAVVQHSESPSPNFY
LDTYKTKEDVSLAINTMGLAGGRTLNTGGALQFMKDTVFSAERGSRAAQNVPQFLIVLTA
GKSRDNVRGPAGALKTEGVLPFGVGVRDADQSQIAAISHNPSFAFTVKEFSQLNRVQKQL
GSFVTLSEENLKTVIEQGDSQGPKKDVVFLVDGSDATRQQFTAIQEFIRRVVENLNVGEN
KIRIGVVQYSDAASGDIYLNSHTTKEGVLNAIKGLRHRGGRQRNLGRAIEFVSRDVLVPT
RGGRRPDGVPQFVIAVSGGRSSDDVTGPATKLKQSGVVPFSIGTRDVGSQELQMVSYVPQ
YAYTIDNFPGLFTIQDGLISTLTELSDEEIRILQPHYPTVSQPGDKRDVVFLIDGSTTVR
SEFPNIRDMIGRVVDKLDVGLDKVRVSVVQYSEEPKVEFLLNEHSTPEELRGAVRKIRNK
GGNRLNTGRALDWVSKNIYQRSAGSRIEEGVPQFLVLVTGGKSSDDVSGPANQLKLSPIA
PLAIGSRNANADELRLISLKPEYAFTVTDFQELPNIEQRLLAPVKTLTTTDIISIRTPVD
VGNISLGKKDIVFLIDGSDSVGSSGIAHIRDFILKVLQQLDISSDQVRVGVVQYSDSQQT
QFSLNSFDKKPDVLAAVKRLRLMGGRSANLAEAIDYVLQNELKQSAGVRPSEASQHLVVL
TGGRSPSDVSPYGPLLKERQVNCIGVGAGAADSRQLSQIATSPADVLQIPSFPGLAGIQE
RFVARLSSKGPTGDIEPTDFDDTGLSPKVADIVFLVDGSINLGRDNFKEVMEFIMNLVDL
FFTERDNLQIGLAHYAADVTDVFYLNTYKNKNDIVDAITRTEYRGGQRLNTGAAIKYVQG
THFTKEKGSRKDEGVPQILMLIKGGKSNDDGKSAALGLQKAGVRIYAVGVGDIEDELSSL
GSEATTVHRARTFQELSELNEQILQTLDDDVKGQKHCTAEQEPTRVCKVEVLVGFDVSAQ
NIFSAQRSLESKMGAILQRIMQMQAISCTSGQAPSVQVGILAMDSASEPVQLDFTGDHAQ
LFDSFKALRTRGPYVLNAKTIDAYTARFRNRATDVVRVVIHLTDGLDGQFAQMKERIEAL
RVSGVNSFILVGLERVPRFEDAVLLEFGRGFRYTKPLRVNLLDLDYELMEELDNIAEREC
CSVPCKCTGQRGDRGAVGASGPKGGPGGEGYRGHPGDEGGPGERGPPGVNGTQGFQGCPG
QRGVKGSRGYSGEKGEFGEIGLDGINGEEGTSGVAGPPGDRGNPGNRGPKGAKGQAGDQG
ETGLRGDPGVTGEDNKKRGPKGDPGDVGPVGEAGSNGEQGGPGEPGRRGADGRRGPPGQP
GPAGKPGADGVEGEPGIGGSRGPPGPMGTPGTRGEDGNPGPRGAGGPSGGPGEKGRRGSV
GRKGEPGDPGPKGVAGPLGPRGEPGDDGRDGFGIPGPKGRSGDEGFPGFPGPKGAAGDPG
PQGGPGPRGNRGQRGVAGNPGDPGQKGDVGYPGPHGLKGPRGPGVVQCELVKKIRDNCPC
CYGAQECPLYPTELAFALDVSDGTAGPAFNNMREAVLKLLGGITISESNCPRGARVALTL
YNQEVTTEVRFADALKKSSLLQRIEGLQPLQTRKPRSLENAMNFLAQNTFKRVRSGFLMR
KVAVFFVNGAVKTSPAFSAAALRLYDAGIASVFITNREDRSLSQALKVNNTVLAQVIALP
APSNAQYNSAIEKIMSCHICLDFCSPSPVCDFIPPSSTRDRRSFTTDLDIDVAFVMDSSQ
STWPAVFMEMKRYIAHIIDQLQIASDPKTSVNHARVAVVQHAPYEFSANGTGAPVRVDID
LTDHGSKEDIMDFLQDKVTQLEGSLSLGNAIEYTIENVFEKAPHHRDLKLIVLMVTGPVW
PQDEEKLVRLSTEAKCKGYFLVILGVGEHLGVTDARILARMASEPASVFFKRINGATQFY
DPHIQRFGLLLPKYISMEHAFYMSPEVSKNCQWYLSDQPWKFPFKHAQKKEEHQKHHVNQ
VVHPAKSKEVDTEELHVANVTSSSLRLRWSSSDSKGMARYEVTVMRLSDHSLALQKNVTG
TELLLEGLESAQNYQVVVVVYAQGKPVHTHKGIVSTKAAEKKTVAPAEVTATLSTAPLDK
PELANENADPCALDFDFGMPCKDYKAKWFFDKKHGICTQFWYGGCGGNANRFETEAQCMR
RCLKTSPEPQAGEQQEETSDPPAPAALFGVNICQLPKEEGSCAKFVLKWHYDFPSKSCTR
FWYGGCEGNQNRFDTQEECLKTCGTAVPGKQKIMAAMKT
NT seq
9480 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaacgctggttcttgtcgttttgcgctcttctttgcgtggcgatctcaggcctg
gtccccgacacccatgctcaggatgatggcagaccagcgctggctgcagatatatacttt
ctagtggattcatcgtggagcattggacaagagaattttcagtacgtcagacagtttctg
ttcagtgcggtaaagactctgagcgagtggagcgatgggttccgcttcgccctggtgcag
tacagcggctcccccaaaacggagttccggttaaacacgtaccaggccccgcaggacgtc
ctggcccacattaggagcctggcgtaccgggggggaggcacccgaacggggcggggcctg
gatttcctgataaagaaccacctgaccgtggcgtccggcagccgggccgcagaaggggtc
cagcaggtggtggtggtccttacggatgggcgttcccaggacgacgtggccccgccctct
tccgtgctgaaaatggccggcgtggacgtgtttgcggtgggggtgcaggacgcggcgatg
tgggagctcagggagatggctagcgcgcccctggacatgcacgtgtacaacgtagacagt
tttactgccctatcgaacatagtccaagacttagtggtcaatctgggtgcggctgcaggt
tttccagtggcagctgaagccactgggataatacaagatgtgacagcacaagagtcagct
gatcttgtattcttaattgatggatcagagaacgttggggccgccaacttcccacaagtc
cgggatttggcactcagcatcgttgagaggcttgatgtgggaagggacgccatccgtgtg
gccgtcattctgtatagtgcggaccctgaggttcagttctatcttaatagttacgacagc
aaaacggctgtcatggacgccatcaaggggcttagcttcacgggcggagaggaggccaac
ttgggggcagctctccaggaggtcgccgataccctcctgaccccccaagcggggggtagg
tcggaagacggggttccgcaagctgtcgtggtaatcagcgctggagcatccagcgacgat
ctcagtttgggtgacagggccctaaagcaagcgagtgtttttgtttttggcgtggccgct
ggcgatgaaagcaccgtgcagctggaaggtattgccacggacaggagctttgtgttgtcg
gcgcccagtgtcaatactgtggccactctgggggaccagctgctgccatacattaatggg
gtggcgcaacgcaccattgtcttacacaccgaagtgatcgaagacgtggctgttgagagg
agggacatcattttccttatagatgggagccagaatatgggtggcacccacttcaatgcc
atccgtgaattcatcaaaaagtttgtcgatatcatgcccattggacctgatcaggtacag
gtgggtgtagcccagttcaccaacacccccaagctggagatggacctgaacacgcacagt
accaaagagtcccttagcactgcagtcgggaagatgcgcataaagggcggcactcaggag
gtcaacattggggctgccctggatttcgtcaggacccagatgctgcgggctgataaaggg
agccgcatcggccagagggtgccccagctggtgctgctcttctcagccaagaaggccagc
gacaccgtcgcccagcaggccacggacctccaccgaatgggcgtcctgaccatggctgct
ggctccaagaatgcagacgaggaggaactgaagacgatcgctttcgacaagagcctggtc
ttcatgctgaaggacttccgtggactggcccgcaaccccacgatgctcatctctccgctc
tccacaatctccggagttgtcgtgactgagcgaccaacagagtcaattgaaataacaacg
gtggagacccaacgcatcatcagagatattgtcttcttggtggacgggtctgactacgtt
ggagaggccggtttcgctcatgtgcgtgacttcatctcccgcatagtgaaccagctggat
gtgcgcccagagagggtgcagattgccctgatgcagtttgcaagggaacagcgcacagag
ttctacctgagtacttacaacaacaagaaggatgttctggatgccgtggctcggatcagg
ccaatgggaggagatgttatttacacaggggcagccctagagtttgccttggaaaacctc
tttcagccatcagctgggtccaggagaagacaaggggtcccgcaggcagtagttctcatc
actggaggcccacctcaagatgaagtcaaacgggttgccgataaggtagcagtggaggga
gttctgacctacacagttggtgctggccaggtggatgaaaatatcttgaaaactgttgcc
tttgtgcccaccttggcttattatgtgagcagattcgatgacctgacaagtgttgttgaa
aacatcatgacacctttaatcacagtggtgggagacacagacactattatcaccgaagta
gaaactactgaaggcaagagggacgtggcatttctcattgatggctctgatgctgtcgga
agtgatttccagtacatcaaggacttcattctgaatgttatcgaacctctcaacgttgga
attgataatgtgcgggttgctgtggttcagcacagtgagagcccctcacccaatttttac
ctggacacttacaaaaccaaagaggatgtgtctttggccatcaacaccatgggactggct
ggcggtcgaactctgaacacagggggagctctgcaattcatgaaggacacggtcttttct
gcagaacggggcagcagagcagctcagaatgttccccagttcctgattgttctgactgca
ggaaaatcaagggacaatgtgagaggacctgctggggcactgaagacagaaggagtcttg
cccttcggagtgggggtgagggatgcagaccagagtcagattgcagcaatctcccacaat
ccttcctttgcattcacggtgaaggaattcagccagcttaacagggttcagaagcaactg
gggagtttcgtcaccctttccgaagagaacttgaagacggtgatagagcaaggtgacagc
cagggtccaaagaaggatgtcgtctttctggttgatggttccgatgccaccaggcagcaa
ttcacagccatccaggaattcatccgcagggtcgtggaaaatctcaacgttggagagaac
aaaatccggattggtgtggtgcagtacagtgatgctgcaagtggggatatctacctgaac
tcccatacgaccaaggaaggcgtcttaaatgccataaaaggcctgagacacagagggggt
aggcagcgtaatttggggagggctatagagtttgtcagccgggatgtattagtccccaca
cgtggaggcagaagaccagacggcgtcccacagtttgtgattgcagtctcagggggcaga
tcttcagatgatgttacaggtccagccacaaaattaaaacagtcaggggtggtgccattc
agtattggaaccagagatgtaggttcccaggagcttcaaatggtttcctatgttccacaa
tacgcttacactattgataatttccctggcctatttaccattcaggacggactcatctcc
actctgacagaactgtcagatgaagaaattaggattttgcaaccccattacccaacagtt
tcacagcctggagacaagagggatgtggtcttccttattgatggatccactacagtgcgt
agtgaattcccaaacatccgggatatgatcgggagggttgtagacaagctggatgtaggc
ctggacaaggtgagggtctctgtggtccaatacagtgaagaacccaaggtggagttcctc
ctcaatgaacattccactccggaggaattgcgaggagcagtgcggaagataaggaacaag
ggaggaaacagactgaacacaggccgagctttggactgggtgtccaaaaacatctaccag
aggtcagctggcagcaggatcgaagagggggtcccgcagttcctcgtactggtcaccggg
ggcaagtcctcagacgacgtctcgggtccagccaatcagctgaagttaagcccgattgct
cctcttgccattggaagcaggaatgccaacgctgatgagctgcggctcatatctttgaaa
cctgaatacgccttcacagttacagattttcaagaactccccaatattgagcaacgcctg
ctagcaccagtgaaaaccttgacaacaacagatataatttccattcgtactccagtggac
gtgggtaatatctcgcttggaaaaaaggacattgttttcctcattgacggatcagacagt
gtgggctccagtggtattgcccacatccgggacttcatactgaaagtgctccagcaactg
gatattagttctgaccaggtccgcgtgggcgttgttcagtacagcgacagccagcagacg
cagttctctctcaactcctttgacaagaagcctgacgttctggcggcggtgaagaggctc
cgcctcatgggtgggcggtctgccaacctggccgaagccatcgattacgtgttacaaaac
gagctcaagcaatcggcgggtgtcaggccatctgaggcctcccagcacttggtggtgctc
accgggggtcggtccccatcagacgtctcgccttatggcccgctgctcaaggaaaggcag
gttaattgcataggagttggtgccggtgcggctgactccaggcagctgtctcagattgcc
acctccccagcggatgtacttcagattcccagtttcccagggctggccggtattcaggag
aggttcgttgccaggcttagtagcaagggacctacaggtgacattgaacccacagatttt
gatgacacaggtttatcccctaaagtagccgacattgtatttttggtggacggttcaata
aaccttggcagagacaatttcaaagaagttatggagttcatcatgaaccttgttgaccta
tttttcacggagagagacaacctgcagattggcctggctcattatgctgcagacgtgact
gacgtgttttaccttaacacctacaagaacaagaatgacatcgttgatgccatcaccagg
acggagtacagaggaggtcagaggctcaacaccggtgccgccattaagtacgttcagggg
actcatttcaccaaggagaagggaagcaggaaagatgagggcgtgccccagatcctgatg
ctcattaagggcgggaagtctaatgacgacgggaagtcggctgccctgggtctccaaaag
gctggtgttcggatctacgccgtcggggtgggcgacattgaggacgagctttccagcctg
gggagtgaggcaaccactgtgcacagagccagaactttccaggagctctctgaacttaac
gaacagatcttgcagactctggacgatgacgtgaagggccagaaacactgcacagcggag
caagagcccacaagggtctgcaaggttgaggtgctggtgggttttgacgtgtcagcacag
aacatctttagtgcccaaaggtctctggaatccaaaatgggtgccatcctccagaggatt
atgcagatgcaagccatcagctgcacatctggacaggctccctctgtgcaggtcggcatc
ctggccatggactccgcctccgaacccgtccaattggacttcacaggagaccacgcccag
ctttttgactccttcaaagccctccgcacccgcggcccttacgtcctcaatgccaagacc
attgatgcctacaccgccagattccgcaacagagccacagatgttgttagagttgtgata
cacctgacagatggtctggatggacagtttgcgcagatgaaggagcgtattgaggctctc
cgtgtttcaggtgtgaacagtttcatcctggttggcctggagagagttccccggtttgaa
gatgctgtgctgctggagttcggccggggcttccgctataccaaacctctgcgtgtcaac
ctgctggacctggactacgagcttatggaggaactggacaacattgcagaaagagaatgc
tgctcggtgccatgcaagtgcactggacagaggggggatcgaggagctgttggagcttct
ggacctaagggtggacctggaggggagggctacagaggacatcctggagatgaaggcggc
cctggtgagagaggtcccccaggtgtgaatggaacccagggattccagggctgtccagga
cagaggggcgtcaagggctctcggggatactccggagaaaagggagaatttggagaaatc
ggtctggatggaatcaatggggaggagggaacaagtggagtggcaggacctccaggagac
agaggaaacccaggaaataggggtcctaaaggtgctaaaggccaggctggagatcaagga
gagactggccttagaggagacccaggtgtaactggagaagacaacaaaaagagaggacca
aagggtgacccaggcgatgtcggaccagtgggagaagcaggatcgaatggagagcaaggt
ggccctggtgaaccaggcaggaggggtgctgatgggaggagaggtccccctggacaacct
gggcctgctgggaaaccaggagctgatggtgtggagggagagccaggcattggagggtct
cggggcccgcctggaccaatgggaactccaggaaccagaggggaggatgggaaccctgga
cccaggggtgctggaggaccttcaggaggtcctggtgaaaagggtagaagaggatctgtt
ggccgcaagggtgaaccaggagatcctggtcctaaaggtgtggctggacccctgggacct
cgcggagagcctggtgatgacggcagagatggctttggaatccctggacctaaaggaaga
agtggtgacgaaggattcccagggttccctggtccgaagggtgcagcgggtgacccaggc
cctcagggaggcccaggtccaagaggaaaccgtggacagcggggtgttgctggtaatcct
ggtgatcctggtcagaaaggggatgttggataccctggacctcatggcctgaaaggacca
agaggacctggcgtggtgcaatgtgaattggtgaagaagatcagagataactgcccttgc
tgctatggcgctcaggagtgcccgctgtaccccactgagctggcattcgccctggacgtg
tcggacggcacagccggcccagccttcaacaacatgagggaagcggtgctcaagctgctg
ggcggcatcaccatctccgagagcaactgcccccggggggcgcgggtggccctgaccctg
tacaaccaggaggtgaccacggaggtgcgcttcgccgacgcgctgaagaagagcagcctg
ctgcagcgcatcgaaggcttgcagccccttcagacccgcaagccgcgcagcctggagaac
gccatgaacttcctggcccagaacaccttcaagcgcgtgcgcagcggcttcctcatgcgc
aaggtggccgtcttcttcgtcaatggtgctgtcaagacctccccggccttcagcgccgcc
gccctccgcctatacgatgccggcatcgcctccgtcttcatcacaaaccgcgaggaccgc
tcgctctcccaggccctgaaggtcaacaacactgtgctggctcaggtcattgctctcccc
gctcctagcaatgcacagtataactcagccatcgagaagatcatgagctgccatatctgt
ctggacttctgctcacccagcccggtctgtgacttcatccccccttcatcgacgagagac
agacgctccttcaccactgacttggacattgatgtggccttcgtgatggacagctctcag
agcacctggcccgcggtattcatggagatgaagcgctacatcgcccacatcatcgaccag
cttcagatcgcctccgaccccaagacctcggtaaaccacgcccgtgtggcggtggtccag
cacgccccctacgagttcagtgccaatggcaccggtgcccccgtacgggtggacatagac
ctgaccgaccacggctccaaggaggacatcatggacttcctgcaggacaaggtgacccag
ctggagggctctctgtcgctgggcaatgccatagagtacaccatcgagaacgtgtttgag
aaggccccgcaccaccgcgacctgaagctcatcgtgctgatggtgacgggtcctgtctgg
ccacaggatgaggagaagctggtgcgcctgtccactgaggccaagtgcaagggctacttc
ctggtaatccttggtgtgggcgagcacctgggtgtcactgacgcccgcatcctcgctcgc
atggccagcgagcccgccagtgtcttcttcaagaggataaatggcgccacccagttctac
gacccgcacattcagcgctttgggctcctccttcccaaatacatcagcatggagcacgcc
ttctatatgtctcctgaagtttccaagaactgtcagtggtacctgagtgaccagccctgg
aaatttcccttcaaacacgcccaaaagaaagaggagcatcagaagcaccatgtgaaccag
gttgtgcatccagctaagagcaaagaagtggatacggaggaactacacgtggccaacgtg
acgtccagcagccttaggctccgctggtccagctccgacagcaagggcatggcccgctac
gaggtgaccgtgatgcggctgagcgaccactccctggccctgcagaagaacgtgacggga
acggagctcctgctggagggcctggagagcgcgcagaattaccaagtggtggtggtcgtg
tacgcgcagggcaagcctgtgcacacgcacaagggcatcgtcagtaccaaagcagctgag
aaaaagacagtggctcctgccgaagtgactgctactctttccactgctccactggacaaa
ccagagctagctaatgaaaatgcagacccgtgcgcacttgattttgacttcggaatgcca
tgcaaagactataaggctaagtggttctttgacaaaaagcacgggatctgtacccagttc
tggtatggtggttgtggagggaatgccaataggttcgagactgaagcccagtgcatgaga
cgctgcttgaaaacatcaccagaaccccaggccggtgagcagcaggaagagacctcagac
ccacctgccccagctgcccttttcggggtgaacatctgccagctccccaaggaagagggt
tcatgtgcaaagtttgtcctcaagtggcactacgacttccccagcaagagctgcacccgc
ttctggtatggaggctgcgaaggcaaccagaaccgcttcgacacccaggaggagtgcctg
aagacctgcgggacagcagtgcctggcaagcaaaaaatcatggcagcaatgaaaacatag
DBGET
integrated database retrieval system
