Anguilla anguilla (European eel): 118213940
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Entry
118213940 CDS
T07545
Symbol
prpf40a
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118213940 (prpf40a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aang03041
]
118213940 (prpf40a)
Spliceosome [BR:
aang03041
]
Complex A
U1 snRNP components
U1 related factors
118213940 (prpf40a)
Complex B
118213940 (prpf40a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
WW_TCERG1
CEP164_N
DTW
DUF4936
Motif
Other DBs
NCBI-GeneID:
118213940
NCBI-ProteinID:
XP_035249097
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All DBs
Position
15
Genome browser
AA seq
923 aa
AA seq
DB search
MSSTDGSNGPNQAAPFPVVPPSGMPPPFMGPPGMPPHFPPMGMPPMGQRPPNMAPMPPAM
IPPMMPPMGGPPMGQMPGMMPPMMPGMMMPPRMPAGPMQPTGPPGVSPVDTSATVAPGTM
LSTPTGGSPQDDQPKKKSVWTEHKSLEGKTYYYNTETKQSTWEKPDDLKSPAEQLLSKCP
WKEYKSDTGKPYYYNSQTKESRWTKPKELEDLEAMIKAEESGTPDPAAAAVAAAAAAAAA
AAASAAAAAAVATATTVTAAPTAQPEAVVAMTTASEAETAVPAVAEEQLTQAPIQVAEVT
ADTPVNSAEDTPSTEAPPGEAPKKEERPELVKKVYKWNTKEEAKQAFKELLKEKGVSSNA
SWEQAMKMIINDPRYSALPKLSEKKQAFNAYKVQTEKEEKEEARIKYKESKETYQRFLEN
HEKMTSTTRYKKAEQMFGELEVWSIVPERDRLEIYEDVLFYLAKKEKEQAKQLRKRNWEA
LKNILDNMANVTYRTTWSEAQQYLLDNPTFAEDEELQNMDKEDALICFEEHIRTLEKEEE
DEKQKSLLRERRRHRKNREAFQKFLDELHDHGQLHSMSAWMEMYPTISSDIRFANMLGQA
VYADSSIGSTPLDLFKFYVEDLKARYHDEKRIIKDILKDKGLTVEVNTAFEEFGTAISSD
KRATTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKEAAFKSMLKQATPPLEPEST
WEGVRERFLKESAFEDVTLESERKRIFKDFIHVLEHECQHHHSKNKKHSKKSKKHHRKRS
RSRSGSESEDDDYHSKKKKRSQSKSPSERSSSGESERSYKKSKKHKKKAKKRRHKSASPE
SEGERDKKGRDRDREREREKEKEREKEKENDRSRGKPRSESKQKSPKRKPGKEEDGWDTS
GSELSEGELEKRRRTLLEQLDAP
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgacagatggtagcaatggcccgaaccaagctgctcctttcccagttgtccca
ccttcagggatgccaccaccctttatgggaccgccaggaatgccacctcatttcccgccc
atggggatgccgccgatgggacagaggcctccgaacatggcccccatgccgccggccatg
atcccgcccatgatgccgccgatgggcgggcctccgatgggacagatgccaggcatgatg
ccaccgatgatgcccgggatgatgatgccaccccgcatgccagctgggccgatgcagccg
acgggaccgcctggtgtaagcccagtggacacttctgccacggtggcaccgggaacaatg
ctcagcactccgactggcggctcccctcaggatgaccagcctaagaagaagtcggtgtgg
acggagcacaagtcattggaggggaagacgtactactacaacacagagaccaagcagtcc
acctgggagaagccggacgacctgaagtccccagcagagcaactgctgtcaaaatgtccc
tggaaggaatataaatcggacacgggaaagccgtactactacaactctcaaaccaaggag
tcccgctggaccaaacctaaagagctggaagatctagaagctatgataaaggctgaagag
tctgggacacctgatccagctgcagctgctgttgctgcggcggcggctgctgctgccgcc
gccgccgcctctgctgctgctgctgccgccgttgccacggccaccacggtcaccgccgca
cccaccgcgcagccggaggccgtcgtcgccatgacgacggcgtccgaggctgagacagcc
gtcccggccgtcgccgaggagcagctgacccaagcgcccatccaggtggccgaggtcacg
gcggacacgcccgtcaactccgccgaggacacgcccagcacggaggccccgcccggggag
gcccctaagaaggaggagcggccggagctggtgaagaaggtctacaagtggaacaccaag
gaggaggccaagcaggccttcaaggagctcctgaaggagaagggcgtgtcatccaatgcc
tcgtgggaacaggccatgaaaatgatcatcaatgacccacgctacagcgcgctacctaaa
ctgagcgagaagaagcaggccttcaacgcatacaaggtccagacggaaaaggaagagaag
gaggaggccaggattaagtacaaggagtccaaagagacctatcagcgcttcctggagaac
cacgagaagatgacctccaccaccagatacaagaaagcagagcagatgttcggcgagctg
gaggtgtggagcatcgttcctgagcgggaccgtctggagatctacgaggacgtcttgttt
tacctggccaagaaggagaaggaacaagccaagcagctgaggaagaggaactgggaagcg
ctgaagaacattctggacaacatggccaacgtgacgtaccgcaccacctggtccgaggcg
cagcagtacctgctggacaaccccaccttcgccgaggatgaggagttacagaatatggac
aaggaggacgcgctgatctgcttcgaggagcacatccgcaccctggagaaggaggaggag
gacgagaagcagaagtccctcctgcgggagaggcgcaggcatcgcaagaaccgggaggcc
ttccagaaattcctggacgagcttcacgaccacgggcagctccattccatgtcggcctgg
atggagatgtaccccaccatcagctctgacatccgcttcgccaacatgctgggccaggcg
gtttatgccgactcttctataggctccacccctctggacctgtttaagttctacgtggag
gacctgaaggcgcgctaccacgacgagaagagaatcatcaaggacatcctgaaggataag
ggcctcactgtggaggtgaacaccgcttttgaggagtttggcaccgcgatcagctccgat
aaaagagccacaacgctggacgccggcaacatcaagctggccttcaacagcttactggag
aaagccgaggcgcgggagagagagcgagagaaggaggaggccaggaagatgaagaggaaa
gaggctgccttcaagagcatgctgaagcaggccaccccgcccctcgaacccgaatccacc
tgggagggagtgcgggagagattcctgaaggaatcggcctttgaggacgtcactctggag
tcggaaaggaagaggatcttcaaggacttcattcatgttttggagcacgagtgccaacac
catcattctaagaacaagaagcattcaaagaaatccaagaagcatcacagaaagaggtcc
cgatctcgctcgggctccgagtctgaagacgacgactaccactcaaagaagaagaagcgg
tcgcagtccaagtccccgtcagagcgctcctccagtggtgaatccgagagaagctacaag
aaatcaaagaagcacaagaagaaggccaagaaaaggcgacacaagtcggcctcccccgag
tccgagggcgagagggacaagaagggcagggaccgcgacagagagcgggagagggagaag
gagaaggagcgggagaaggagaaagagaacgaccggtccagggggaaacctcgctccgag
tccaagcagaagtctcccaagagaaagccggggaaggaggaggacggctgggacacctcg
gggagcgagctgagcgagggggagctggagaagaggaggaggaccctgctggagcagctg
gacgcgccctga
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