Anguilla anguilla (European eel): 118213953
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Entry
118213953 CDS
T07545
Symbol
upf3a
Name
(RefSeq) regulator of nonsense transcripts 3A
KO
K14328
regulator of nonsense transcripts 3
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang03013
Nucleocytoplasmic transport
aang03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118213953 (upf3a)
03015 mRNA surveillance pathway
118213953 (upf3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aang03019
]
118213953 (upf3a)
Messenger RNA biogenesis [BR:
aang03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
118213953 (upf3a)
mRNA cycle factors
P-body specific factors
118213953 (upf3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
118213953
NCBI-ProteinID:
XP_035249125
LinkDB
All DBs
Position
15:complement(34881613..34888850)
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AA seq
464 aa
AA seq
DB search
MRAEKEFMTESGERKNVDIHFRDLPRDQDSVTTNSKPKEEKREVFTKVVLRRLPPSLSKD
QLEEQISPLPAFDYFEFFSADQSLYPHLFSRAYINFKNPEDIVLFRDRFDGYVFIDNKGQ
EYPAIVEFAPFQKVSKKKLKKKDTKAGSIEEDPEYRRFLENYCCDEEKVTANPETLLGEI
EAKTRELIAKRTTPLLEYIKNKKLEKQRIREEKREERRRRELEKKRQREEEKRKRREEER
RKRKEAEKQKKLAEKEIKFKLLKKCDRDEDGDSDRLKDRADGGESDRSKLDKPSGHLKTK
HLDKEAKDKGQAESDREQREQGRRPREKEAGGERHRGREEARRRHRHHYELDKFTRRKEE
TKWGKGYCQDRAKKDGHPHHGYGHCPSAGDKAGKDGREDAGSRKERIRNKDRPTMQLYQP
GVRSRSGAGSGGAGPDCFGTSPEWGAEPRFEIAMGTGSEKSGDE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgagggcggaaaaggagtttatgaccgaaagtggggaaagaaagaacgtcgacatacac
ttcagggaccttccaagggaccaagacagcgtcacaaccaattctaaacccaaagaagag
aaaagagaagtttttacaaaggtagttcttcggcgattgccacccagtctgtcaaaggac
cagttggaagaacaaatcagtcctttacctgctttcgactatttcgaattcttctcagcc
gatcaaagcctttatccacacctcttctcaagagcatacattaatttcaaaaaccccgaa
gatattgttctcttcagagaccgtttcgatggctatgtgttcatagataacaaaggtcag
gaatatcctgccattgtagaatttgcgccatttcagaaagtttctaagaagaagctgaag
aagaaagacacaaaggccggaagcattgaggaagatccggagtacaggcggtttttggaa
aactactgctgtgatgaggagaaggtgacggcaaaccctgaaacactgctgggagagatc
gaggccaagaccagggagctcatagccaagaggacaacgccgcttctagagtacatcaag
aacaagaagcttgagaagcagagaatccgggaggagaaacgggaggagaggaggcgcagg
gagctggagaagaagcgacagagagaggaggagaagaggaagcgcagggaggaggagaga
agaaagcgcaaggaggccgagaagcagaagaaactggcagaaaaggaaattaagttcaag
ctcctgaagaagtgtgaccgagacgaagatggggattcggacagactgaaggacagagcg
gacggtggagagtcggacagaagcaaactggacaaaccctctgggcatctgaagacaaaa
cacctggacaaggaagcgaaagacaaaggccaggcggagagtgacagagagcagagggag
caggggcggcggccgcgggagaaggaggcgggcggggagcggcaccgcgggcgcgaggag
gcgcggcggcgccaccggcaccactacgagctggacaagttcacgcgccgcaaggaggag
accaagtggggcaaagggtactgccaggaccgggccaagaaggacgggcacccgcaccac
ggctacgggcactgccccagcgcgggcgacaaggcgggcaaggacgggcgcgaagacgcg
ggcagcaggaaggagcgcatccgcaacaaggaccgtcccacgatgcagctgtaccagccg
ggggtgcgcagccgctccggcgcggggtcggggggcgcaggccccgactgcttcggcacc
tcccctgagtggggggcggaacccaggttcgagatcgccatgggaaccggctcggagaag
agcggggacgagtag
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