Anguilla anguilla (European eel): 118214147
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Entry
118214147 CDS
T07545
Name
(RefSeq) collagen alpha-1(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang04382
Cornified envelope formation
aang04510
Focal adhesion
aang04512
ECM-receptor interaction
aang04518
Integrin signaling
aang04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118214147
04518 Integrin signaling
118214147
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118214147
09142 Cell motility
04820 Cytoskeleton in muscle cells
118214147
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
118214147
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aang04147
]
118214147
00536 Glycosaminoglycan binding proteins [BR:
aang00536
]
118214147
Exosome [BR:
aang04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
118214147
Glycosaminoglycan binding proteins [BR:
aang00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118214147
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
118214147
NCBI-ProteinID:
XP_035249676
LinkDB
All DBs
Position
15:30727103..30782488
Genome browser
AA seq
1639 aa
AA seq
DB search
MLLLNCVLLLLFSFDIRPTGAEGCSGTGCGKCDCSGVKGEKGERGFPGLQGNMGFPGMQG
HEGPPGPVGPKGDFGDSGVPGLKGTRGPPGLPGFPGNPGLPGIPGQDGPPGAAGIPGCNG
TKGDRGNDGLPGFPGPSGPPGIPGLTGDKGDAGGIIGGFIPKKGEKGFSGMPGQQGAQGG
PGIPGQNGPVGPPGPRGNPGPPGPKGEQGDKLSFQGEKGDKGDRGHRGPPGPTSPPHEQE
KPPITIAVPGPQGETGERGGKGEKGYCLPYQTGVKGEPGSPGPRGKPGKDGENGSKGEKG
FSGGPGYPGQPGEKGERGRPGYGDSAPGPAGQPGPQGPKGDKGFPGLQGVRGLPGNVIEG
PPGEKGFPGEIGQKGDRGIDGLSLLGPKGINGAPGPPGPPGPPGDGDCNINHGPPGPPGP
PGLGGEEGQKGDQGETCLHCVAHGLPGLPGPPGPEGKQGFPGPGGSKGEQGLSGPPGRQG
DPGSTGSPGLIGAPGAHGPPGDIYAAPELKGDKGFPGTPGSRGLPGVDGLPGRDGIPGHT
GVKGEPATVGIKGDRGRDGDPGSIGTPGERGPPGIPGFGLPGEPGEKGDQGVPGRPGAPG
FAGPKGEAGKGVGSPGPQGVPGPRGDMGRPGRQGDQGPRGDTGMPGFPGQKGDPGLPGIG
LPGLPGPKGFSGIPGASGIPGAPGAAGQDGFPGKTGSPGQKGEPGRGLPGAKGSMGPQGV
SGFPGEKGSSGLPGIPGREGQTGPPGAQGIKGDSGPPGLHGIEGPPGPPGPGEPGPPGPM
GQAGLPGPFGNVGVKGEKGYPGLPGLDMPGPQGEKGSEGLPGIVGSKGFPGRAGPAGRDG
FPGQPGPKGEMGVIGTPGTPGYQGVPGGPGAPGPRGDTGVTGGKGEFGEPGPKGERGERG
QKGPPGSMSEVDMVLMKGDKGDAGDRGGPGRAGEKGYQGQPGVPGMPGKDGEPGSPGQPG
QKGDIGKPGEPGSVGSPGHKGSIGEMGMPGSLGSKGAKGTIGTPGHPGLPGSGGERGDKG
DAGQPGVGVPGPPGEKGQIGLPGFPGTSGEKGQKGVMGVPGMPGSPGQKGDVGLEGRQGS
PGTPGAKGISGFPGRPGDPGVPGRPGEPGLQGPSGPSGEKGEPGVDGIPGSSGEKGDPGV
PGRGLPGSPGQSGTKGDKGDAGVPGFPGSPGIPGIKGIKGTVGEQGQPGWPGERGLPGPS
TEGPKGEKGVLGAQGEPGAPGAAGHPGIPGSVGSKGERGDEGSPGPPGRQGEKGDRGHPG
FPGQTGLPGVNGYKGDVGQQGVPGFQGSKGDTGVIGLKGELGDRGSSGEKGSVGPPGPPG
PHTLVKGDIGFPGIQGPQGPKGQPGFPGLKGLQGVTGQQGDKGDDGVPGYHGRPGSKGEP
GPLGPSGPRGYPGPPGPDGLPGQVGPPGPSSMDHGFLVTRHSQTVEVPGCPEGTSLIYDG
YSLLYVQGNERSHGQDLGTAGSCLRKFSPMPFLFCNINNVCNFASRNDYSYWLTSPEPMP
MSMAPVTGQSIKPFISRCAVCEAPAMVIAVHSQTIMIPPCPTGWDSMWIGYSFVMHTSAG
AEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATIEESEMFKKPVPTTL
KAGDLRTHISRCQVCMKRT
NT seq
4920 nt
NT seq
+upstream
nt +downstream
nt
atgctgctcctcaattgcgttctgttgcttctgttcagctttgacataagacctacgggg
gctgagggatgctccggcacgggatgtgggaagtgcgactgctctggggtcaaaggtgaa
aagggtgagagggggtttccaggactgcaaggcaacatgggatttcctggaatgcaagga
catgaggggcccccagggccagttggccccaagggagacttcggagactcaggagtgccc
gggctgaaaggaacacgtggtcctccaggtttgccggggtttccgggaaacccaggtctc
ccaggaatcccagggcaagatggccccccaggtgcagcaggcatcccgggttgtaatggg
acgaagggggaccggggcaatgatggcttgccaggatttcctggaccaagcggccctcct
ggtatccccggattgacaggagacaagggggatgccggcggcatcatcggcggcttcatc
ccaaagaaaggagagaagggtttcagcggaatgcccggtcagcagggagcgcagggaggt
cccggaattccaggccaaaatggacccgtaggacctccaggaccccgggggaatcctggc
ccccctggccccaaaggagagcagggtgacaagctgtctttccaaggtgaaaaaggtgat
aagggagaccgaggacaccggggtcctcctgggcccacgtctcccccccatgaacaggag
aaacctcctattacaattgctgtacctggaccgcagggtgaaacaggggaacgtggtgga
aaaggagagaaaggttactgtttaccctaccagactggtgtcaaaggggaacctggctct
cctggcccaaggggtaaaccaggcaaggacggagagaatgggagtaaaggcgagaaaggg
ttttctggaggccccgggtaccctggacagccgggtgaaaagggagagcgaggacgtcca
ggatatggtgatagtgctcctggcccagcaggtcaacccggtcctcaaggtccaaaagga
gacaagggtttccctgggcttcaaggagtccggggtcttcctggcaatgtgattgagggc
cccccaggggagaaaggattcccaggagagatcggtcagaaaggggacaggggtatcgat
gggctgtcactgcttggaccaaaaggcataaacggggccccggggccacctggcccacct
ggccctccaggtgatggagactgcaacataaaccacggccccccggggccacccgggccc
cccggactcggtggagaagagggccagaaaggtgaccaaggagagacctgcttgcattgt
gtggcccatggtctccctggccttccgggcccacctggcccagagggaaaacaaggtttc
cctggacctggcggcagcaaaggagagcagggtctatctgggcctcctggtcgtcagggt
gacccaggcagcactggttccccagggctgataggggccccaggagcccatggaccgcca
ggtgacatctatgcagcaccagaactgaagggggacaagggctttcctggcaccccaggg
tcaaggggtctaccgggagtggacgggctccctggccgggatgggatcccgggccatact
ggagtcaaaggagagccagcaactgtgggtatcaaaggagacaggggcagggatggagac
ccgggttcgattgggacaccaggagagcgagggccccctgggatcccagggtttggtctt
cctggggagccgggagagaagggtgatcagggggtgccagggcgcccaggagctccaggc
tttgcaggacccaaaggtgaagctgggaaaggtgttggctcacctgggccacaaggtgtc
cctggacctcgaggggacatgggaagacctggccggcaaggtgatcaaggtcctcgaggg
gacactggcatgccaggtttccctggacagaagggtgacccaggcctcccaggaattgga
ttacctggcctcccaggccctaaaggtttttctggaataccgggtgcatctgggatacct
ggagcaccaggagcagctgggcaggatggtttccccggaaaaactggctcaccagggcaa
aagggggaaccagggcggggtcttcctggggccaaggggtccatggggcctcagggggtc
tctgggttcccaggagagaagggcagttctgggttacctggcatcccaggacgtgaggga
cagacagggcctcctggggctcagggaatcaaaggtgattcaggacccccagggctgcat
gggattgaggggccacctggccccccaggaccaggcgagccaggaccacctgggcccatg
ggccaagcaggcttacctggcccctttggaaacgtgggagtgaagggggaaaaggggtac
cccggcctccctggcctggacatgcccggacctcagggggagaagggtagcgaagggctc
ccgggaatagtgggatccaaaggctttcccggaagagcaggccctgctggaagagacggg
tttccaggccagccaggtcccaagggggagatgggggtgataggaacaccggggaccccc
ggataccagggcgttcctgggggtcccggcgccccaggaccgagaggtgacactggggtc
actggggggaagggagagttcggcgagccgggacccaaaggagagagaggagagcggggt
cagaagggaccccctggcagcatgagcgaagtggacatggtgctcatgaagggagacaag
ggagatgctggggacagaggtggtcccggacgagcgggagaaaaaggataccagggacag
cccggagtaccaggaatgccaggaaaagacggagaaccagggtcaccaggacaaccagga
cagaaaggtgacattggaaaaccaggggagccaggaagtgttggatcacctggacataaa
ggcagcattggggaaatgggcatgccaggctcattaggatcaaaaggtgctaaaggaacg
atcgggacacctggccaccctgggctccccggctctgggggagagaggggggataaaggg
gacgcgggacagccaggtgtcggggttcctggaccccctggagagaagggtcagataggc
ttgcctggttttcctggaacctctggagaaaagggtcagaagggggtgatgggagtcccg
ggaatgccaggatcgccaggccagaagggagacgtgggcttagaaggccggcaaggaagc
cctggaaccccgggagcgaaaggcatcagtggctttccaggtcgcccaggagacccaggt
gtaccaggacggccaggtgagccaggtttgcagggcccatcaggaccctcgggcgagaaa
ggtgagccaggtgtggatgggatacccgggtcctcaggagagaagggagacccaggtgtg
cctggcagaggcttacctgggagccctggccaatccggcaccaaaggtgacaaaggcgac
gcaggtgtcccaggttttcccggaagcccaggtatcccgggaataaagggcatcaagggc
acggtcggtgaacagggccagccaggctggccgggggaacggggcctccccgggccctcc
actgaagggccaaagggagagaaaggagtgctgggggctcagggagagccaggtgcgcct
ggagctgcgggtcatcctggaattccgggaagtgtaggatccaaaggggagaggggagac
gagggttcccctggccccccgggacggcagggtgaaaagggggatagaggtcatccagga
tttcctggacaaactgggctgcctggagtcaatgggtataaaggtgacgttggacaacag
ggagtacctggattccaagggtcgaaaggtgacactggagtgatcgggctcaagggcgag
ctgggagacagaggttcctccggggagaaaggcagtgttgggccccccgggcctcctgga
ccccacaccttagtcaaaggagacattggcttcccagggattcaaggcccccaggggccc
aagggacagcccggatttcccggactgaaggggcttcaaggtgtaacgggacaacagggt
gacaaaggagacgatggggtgcctgggtaccacggacgtcccggctccaagggagagccc
ggccctcttggaccctcaggtccccgagggtatccgggccccccagggcccgacggcctg
cccggccaggtggggcctccgggtccctcgtcgatggaccacgggttcctggtgacccgc
cacagccaaacggtggaggtgccaggctgccccgagggcaccagcctcatctacgacgga
tactccctcctgtacgtccagggcaacgagcgttcgcacggtcaggacctcggaaccgca
gggagctgcttgaggaagtttagccccatgcccttcctcttctgcaacatcaacaacgtc
tgcaactttgcctcccggaacgactactcctattggctgacctcgccggagcccatgccc
atgagcatggcacccgtcaccgggcagagcatcaagcccttcatcagcaggtgtgctgtg
tgtgaggctccagccatggtgatcgcagtccacagccagaccataatgatcccgccctgc
cctaccggatgggactccatgtggattggatactccttcgtcatgcacaccagcgcgggg
gcggaaggttccggtcaggccctggcgtcccccggctcctgcctggaggagttccgctcc
gcccccttcatcgagtgccacgggcggggcacctgcaactactacgccaactcctacagc
ttctggctggccaccatcgaggagagcgagatgtttaagaaacccgtcccaacgacgctg
aaggcgggagacctgcgcacgcacatcagcaggtgccaggtgtgcatgaagaggacgtaa
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