KEGG   Anguilla anguilla (European eel): 118215435
Entry
118215435         CDS       T07545                                 
Symbol
ddb1
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
aang  Anguilla anguilla (European eel)
Pathway
aang03420  Nucleotide excision repair
aang04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:aang00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    118215435 (ddb1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    118215435 (ddb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aang04121]
    118215435 (ddb1)
   03400 DNA repair and recombination proteins [BR:aang03400]
    118215435 (ddb1)
Ubiquitin system [BR:aang04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     118215435 (ddb1)
DNA repair and recombination proteins [BR:aang03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      118215435 (ddb1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      118215435 (ddb1)
SSDB
Motif
Pfam: CPSF_A Beta-prop_RSE1_1st Beta-prop_RSE1_2nd Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 118215435
NCBI-ProteinID: XP_035252127
LinkDB
Position
16:5245625..5274880
AA seq 1139 aa
MSYNYVVTAQKPTAVNACITGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGI
IGIVDPECRMIGLRLYDGLFKVIPLDRENRELKAFNIRLEELQVIDVHFLYGCQVPTVCF
IYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYH
NGDKYLAIAPPTIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEELMDGAVVLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNDQGSYVAVMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSEAGRE
TDDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNQQTFYCGNVTHQQLIQITSGSVRLVM
QETKALVSEWKEPQGRNISVAACNSTQVVLAVGRVLYYLEIHRGELKQISFTEMEHEVAC
LDITPLGEGGESPLCAVGLWTDISARILKLPSFSALHKEMLGGEIIPRSILMTTFEGSHY
LLCALGDGALFYFGLDLQTGVLSERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPTVIYS
SNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESP
RRICYQEMSQCFGVLSSRVEMQDASGATAAVRPSASTQALSSSVSSSKLFPSSTSPHETS
FGEEVEVHSLLVVDQHTFEVLHAHQFLQSEYALSMVSCRLGRDPSVYFVVGTAMVYPEEA
EPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELRT
ECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILD
DDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGVFHLGEFVNVFSHGSLVLQNLGESS
TPTQGSVLFGTVNGMIGLVTSLSEGWYSLLMDLQNRLNKVIKSVGKIEHSFWRSFHTERK
TEQATGFIDGDLIESFLDLGRAKMQEVVSSLQIDDGSGMKREATVDEVIKIVEELTRIH
NT seq 3420 nt   +upstreamnt  +downstreamnt
atgtcttataattacgtggtcaccgcacagaagccgacggccgtcaatgcctgcattact
gggcacttcacctccgcggaggacctcaacctcctcatcgccaagaacacccggctggag
atctacgtggtgacggccgaggggcttcggccggtcaaggaggtggggatgtacggcaag
atcgccgtcatggaactcttccggccgaagggcgagagcaaggacctgctgttcatcctg
acggccaagtacaacgcctgcatcctggagtacaagcagagcggggagagcatcgacatc
atcacccgcgcccacggcaacgtgcaggatcggattggccggccctcagagacggggatc
attggcatcgtggacccggagtgccgcatgattggcctacggctgtacgacggtcttttt
aaggtcatccccctggaccgagagaaccgcgagctcaaggccttcaatatccggctagag
gagcttcaggtcatcgacgtccacttcctctatggctgccaggtccccacagtgtgcttc
atttaccaggatccccagggcaggcacgtgaagacgtacgaagtgtcgctccgcgagaaa
gagttcaacaagggcccctggaagcaggagaacgtggaggccgaggcgtccatggtcatc
ccagtgccagagccatttgggggagccataatcatcgggcaagagtccatcacctaccac
aacggagacaaatatttggccatagcgccccccaccatcaagcaaagcactattgtgtgc
cataaccgcgtggaccctaacggctcgcgctacctgctgggggacatggagggccggctc
ttcatgctgctcctggagaaggaggagctgatggacggagccgtggtgctcaaggacctg
agggtggagctactgggggagacctccattgctgagtgtctcacatacctggacaatggc
gtggttttcgtgggttcccgactcggagactcccagctggtcaagctgaatgtggacagc
aatgatcagggctcgtacgtcgccgtgatggagaccttcactaacctggggcccattgtg
gacatgtgtgtggtggacctggagagacagggccagggacagctggtcacctgctcgggc
gcttttaaggagggctcgctgagaatcatccgcaacggcatcgggatccacgagcacgcc
agcatcgacctgccggggatcaaaggactgtggcccctgcgctcggaggccggacgggag
accgacgacatgctggtgctttccttcgtcggccagacaagggtgctgatgctcagcggt
gaggaagtggaggagacggagctgcctgggtttgtggacaaccagcagaccttctactgt
ggcaatgtgactcaccagcagctcatccagatcacctccggctcggtgcggctggtgatg
caggagaccaaagcgctggtgagcgagtggaaggagccgcaggggaggaacatcagcgtc
gccgcctgcaactccacacaggtggtcctggctgtgggccgcgtgctgtactacctggag
atccaccgaggagagctcaaacagatcagcttcacggagatggagcacgaggtggcctgc
ctggacatcacgcccctcggggagggcggggagtcgcccctgtgcgccgtgggcctgtgg
acggacatctccgcccgcatcctcaaactgccctccttctccgccctgcacaaggagatg
ctgggaggagaaatcatcccccgctccatcctgatgaccacgttcgagggaagccactac
ctgctctgcgccctgggagacggagcgctcttctactttggcctagaccttcagacaggt
gtcctcagcgagcgcaagaaggtcaccctggggacgcagccgacggtcctgcgcacgttc
cgctccctgtccacctccaatgtcttcgcctgctccgaccggcccaccgtcatatactcc
agcaaccacaagctggtcttctccaacgtcaacctcaaggaggtcaactacatgtgcccc
ctcaactccgagggctaccccgacagtctggccctggccaataacagcacactgaccatt
ggaaccatcgatgagatccagaaattgcacattcgcactgtccctctgtacgaatctccc
aggagaatctgttatcaggagatgtcgcagtgtttcggggtgctgtccagccgggtggag
atgcaggacgccagcggagccaccgctgccgtccgtcccagtgcaagcacacaggctctc
tccagcagcgtcagctccagtaagctcttccccagcagcacctccccccacgagacctcc
tttggggaggaggtggaggtccacagcctgctcgtggtggaccagcacaccttcgaagtg
ctccacgctcaccagttcctgcagagcgagtacgctctcagcatggtgtcctgtcgtctg
ggccgggacccctctgtgtacttcgttgttggcacggcgatggtgtaccccgaggaggcg
gagccgaagcagggccgcatcatcgtcttccactacactgatgggaagctgcagacggtg
gctgagaaggaggttaagggagcggtgtactccatggtggagttcaatggcaagctgctg
gctagtatcaacagtactgtgcgcctgtatgagtggacagctgagaaggagctgaggacg
gagtgcaaccactacaacaacatcatggcgctctacctgaagacgaagggagacttcatc
ctggtgggggacctgatgcggtctgtgctgctgctggcctacaagcccatggagggaaac
tttgaggagatcgcacgcgacttcaaccccaactggatgagcgctgtggagatactggac
gacgacaacttcctcggcgcggagaacgccttcaacctgttcgtgtgccagaaagacagc
gcggcgaccacggacgaggagcggcagcacctgcaggaggtgggcgtgttccacctgggg
gagttcgtcaacgtgttctcccacgggtccctcgtcctccagaacctgggggagagctcc
acccccacccagggctccgtgctgtttgggaccgtcaacggcatgatcggtctggtgact
tcgctgtcagagggctggtacagcctgctgatggacctgcagaacagactcaataaagtt
atcaagagcgtgggcaagatcgagcacagcttctggaggtccttccacacggagcggaag
accgagcaggcgacgggcttcatcgacggggacctgatcgagagcttcctggacctgggc
cgggccaagatgcaggaggtggtgagcagtctgcagatcgacgacggcagcgggatgaag
agggaggccaccgtggacgaggtgatcaagatcgtggaggagctgacccggatccactag

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