Anguilla anguilla (European eel): 118215852
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Entry
118215852 CDS
T07545
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9-like isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
aang
Anguilla anguilla (European eel)
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aang03036
]
118215852
Chromosome and associated proteins [BR:
aang03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118215852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
118215852
NCBI-ProteinID:
XP_035252759
LinkDB
All DBs
Position
16:31343018..31426613
Genome browser
AA seq
3016 aa
AA seq
DB search
MTDPMMDFFDDPNLFGGGLEALSDESFASGPVSLVDELNLSAEFEPLQVEPLGMAKHPGL
GPATSQQGLTFEQQISHFEAMKTPHPIGQPFPASEGGAIGGGGGGGVLSQHAQFHSSPAQ
QAPQSNGLFPDSSPMWGNQDQNGNSFHQLPPPPPQQPGQHHQHLNQHHHRPHHLQQQQPP
PHVGPQPQALHPHSKAFPEHHEFDFYQGNLAPKQQLQQQQRQPSPHGLPRSLPLTAGGSL
NGSPFHQGGAANTMAQPPKAYLDAHSHTASFPGGSQQQQQQQQGRMLSCQGAQKFPGPAE
DVTVLPFSRSPALSSCSVTSGAAYPPPQYSFPGQPAMGTGDPRTPAPAPPGPAKASALHA
PTIPDFSGAGDAFSLLPALGQPQEQQGPGGQAGKCPFQALHHPRPAQGTYSSPAIFSPDM
GCYSGAVSQHPSAQQGVCQTAAAPPVTAGNGYPALDENLLQQVGGHGGAFGELEAPDLLG
DDLLPQLEAALSQGTPLDHRDDSNCSWANGDQDEDSSFSVTYEAQQPRKNTNGSSSHPRV
LSPTMKSSSSSSSSSSSSSSSSSSSERRLQRKQLMEPLLEDKQEKANRIISEAIAKARQR
GEQNIPRVMSPESFPSSSERRGRRGNKARQGKGKASKKARIVASKQPKQKPKIGKIVIKL
GKRRKRKNESSEEPSDDEPPPRRSSREDDSKRRSNRQVKRKKYVEDGESRVSDEEARVIV
KAKKPKSAPGRKGPSAQLFVENPSEEDAAVVDKIMASRVLKNEVSPGVVVEVEEFFVKYK
NYSYLHCEWATEQRLVRDKRIQQKIKRFKIKQAQRAHFFADIEEDPFNPDYVEVDRVLEV
SCCEDKDSGEPVVYYLVKWCSLPYEDSTWELKEDVDQLKVEEFEQLQAIRPDLRRVERPP
ASHWKKREHSREYCNGNSLRDYQLEGVNWLLFNWYNRRNCILADEMGLGKTIQSITFLEE
IHRTGVRGPFLIIAPLSTIANWEREFRTWTQPNVIVYHGSGVSRQMLQQYEMYFRDTQGR
PIHGAYKFQAVITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGFKLMSLEHK
VLLTGTPLQNTVEELFSLLHFLEPSRFPSENTFLQEFGDLKTEEQVQKLQAILKPMMLRR
LKEDVEKKLAPKEETIVEVELTNIQKKYYRAILEKNFSFLAKGAGQANVPNLVNTMMELR
KCCNHPYLIKGAEEKILEDFREVYSPSALDFHLQAMVQSAGKLVLIDKLLPKMKAGGHKV
LIFSQMVRCLDILEDFLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAG
GLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQDKAVKVYRLITRNSYEREMFDRAS
LKLGLDKAVLQSMSGRESSTGGQIQQQLSKKEIEDLLRKGAYGAIMDEEDEGSKFCEEDI
DQILQRRTKTITIESEGRGSTFAKASFVSSGNRTDISLDDPNFWDKWAKKAEIDVATVNG
RNSLVIDTPRVRKQTRPFSATKDELAELSEGESDGGGDKPKLRRPHDRLSGYGRTECFRV
EKNLLVYGWGRWKDILLHGRFKRPLSERDVEMICRALLAYCLVHYRGDDKIKSFMWDLIA
PTEDGRTRELQNHLGLSTPVPRGRKGKKMKTQVSSFDIHKAEWIRKHNPEHLLQDDGYKK
HLKHHCNKVLLRVRMLYYLKQEVIGDQCQNVLGGADSREVEVWVPELDHSELPTLWWDAQ
ADKSLLLGVYKHGYEKYNTIRADPALCFLERVGRPDDKAIAAEQRANDFMDGDVDDPEYK
PAPALLKDDMEDDASSPGDLVITDTAGDGGVAMEGDVAYWPPPSALTARLRRLITASQRY
TKSRQIQHIHQTQQAVLPQPCAASPALNHSLSPKMAAKMERQQRWTRREEADFYRVVSTF
GVVFDPELGRFDWTKFRAMARLHKKTDESLRKYLRTFTAMCRRVCRLPPRDGDSVDPSIS
IQPITEERASRTLYRIELLRKVREQVLRHAQLYERLALCQAGPDLPVWWEAGTHDRDLLI
GAAKHGVSRTDYHILRDPELCFMSAQRNYSHAKGAPPRPHPPPPLLQPHHQAALAGSPLA
RQPDARGPPRDEERRTLPKEEPVSDEEELGDGRAQAEGWSPRTGARTPPGPDGRPGPGKG
PSEKRMVAARTKPLTPNSATQKQRKPRKRSRKEARRASDSDGSSSSSSSRSSSSSSSSSS
SSSCSRSGSSSSSSSSSCSSGSSSSSSSSSSEGSDSEGEERKKTATAVPSVKAFDEDSVA
SLSTTQDETQDSYLTENGLPNSHHPFQGGFMLAASYWPKDRVMINRLDSICQAVLKGQWP
GARRAYEPSVVSSFYTTKLRDSPGGPGDAPGPPGPGEEPPASPQMSKVKKHVPDKEFTVK
INNQEGGLKLTFQKQGVPQKRSLEGEEGPLGQPQYLARLQELQSASDAAGLAEFSQPPTP
APAAAVGQGFPGHMRVNGVMDGQPVVKKRRGRRKNVEGMDLLFMNKTRVPVTPEQVPAGW
SGSAKASPAAGPTPGFGQGPGPVDTESRVPVINLKDGTRLAGDDAPKRKDLELWLREHPG
FVADVGAFIPGVSKVPFPEVRPKQKRHRCRNPNKMDVNSLTGEERVQIINRRNARKVGGA
FAPPLKDLCRFLQENPEYGVPPEWADVVKQSGYLPESMFDRILTGPIVPEEVCRRGRRPK
STQAKAAAAAAAAANAGSAPLGLSPLLANGLLSGMDLSSLQALQQNLQSLQSLQLTAGLM
GLPGDAGSLAAMFPMMLSGMAGLPNLLGLSSLLGKAQEPAGGAERKRKGPRGKGGDRSAP
RAPRTPGSAPRAPRTPGSAPRAPRTSGSDPRAPRTPRTPGSDPKGERTEGESAEPRVGDP
PSSSSSSSSSSIPPSASAAASSGSAHPGALNPLLLSSMLYPGMLLQPGLDLPVSPPPQPG
AFDTNAGPAAPPAPRVTQEQGRGEAGRRREKEESGSESADPKGNSGAEGSDKGESSSSES
DSSSSSSSDSDSSDED
NT seq
9051 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccccatgatggacttcttcgacgaccccaacttgtttgggggcgggctcgag
gcgctctcggacgagagcttcgcctcgggccctgtgtccctggtggacgagctgaacctg
agcgcggagttcgagcccctgcaggtggagcccctgggcatggcgaaacaccccggcctg
ggccccgccacctcccagcagggcctgaccttcgagcagcagatcagccatttcgaggcc
atgaagacccctcatccaatcggacagcctttccccgcctccgagggcggggccatcggc
ggcggcggcggcggaggcgtgctgtcccagcatgcccagttccacagctcccctgcccag
caggcgccccagtccaacgggctcttccccgacagcagccccatgtggggcaaccaggac
cagaacggcaattcctttcaccagctgccgccgccgccgccgcagcagcccggccagcac
catcagcaccttaaccagcaccaccaccggccccaccacctgcagcagcagcagcccccg
ccgcacgtgggcccccagccccaggccctgcacccgcacagcaaggcctttccggagcac
cacgagtttgacttttaccaggggaacctggcgcccaagcagcagctccagcagcagcag
cggcagcccagcccccacggcctgccccgttccctgccgctgaccgctggagggagcctc
aatggcagccctttccaccaaggtggagccgctaacaccatggcccagccccccaaggcc
tatctggacgcccacagccacaccgcctcctttccgggtggctcccagcagcagcagcag
cagcagcagggccggatgctgagctgtcagggggctcagaagttccccggtcccgcggag
gacgtgaccgttttgccgttttcccgctccccggcgctgtcctcctgctccgtcacctcc
ggcgccgcctaccctccgccccagtactccttcccgggacagccggcgatgggcaccggc
gacccccgaactccggccccggcgccccccggtcccgccaaggcctccgccctgcacgca
cccaccatcccggacttctcgggggcgggcgacgccttctcgctgctccccgcgttgggc
cagccgcaggagcagcaggggcccgggggccaggcggggaagtgcccgttccaggccctg
caccaccccaggccagctcagggaacctacagcagccccgccatcttctccccggacatg
ggctgctactccggagctgtgagccagcacccctctgcccagcagggcgtctgccagacg
gccgccgctccgccggtaaccgccggcaacggctacccggccctggacgagaacctcctg
cagcaagtgggaggtcacggcggggcgttcggggagctggaggcccccgacctcctgggg
gacgacctgctgcctcagctggaggccgccctgagccaggggacccccctggatcaccgg
gacgactccaactgctcctgggccaacggcgaccaggacgaggacagctccttctctgtg
acctacgaggcacagcagccccgtaagaacactaatggttccagcagccacccacgggtc
ctcagccctaccatgaagagcagctcgtcttcctcctcgtcctcctcctcctcgtcctcc
tcctcctcctcctcagagaggaggctgcagaggaagcagctgatggagccgctgctggag
gacaagcaggagaaggccaaccgcatcatctcggaggccatcgccaaggcgcggcagcgc
ggggagcagaacatcccgcgggtcatgagccccgagagcttccccagctcctccgagcgc
cgcggccgccgcggcaacaaggcccgccaaggcaagggcaaggcctccaagaaggccagg
atcgtggcctccaagcagcccaaacagaagcccaagatcgggaaaatcgtcatcaagctg
ggcaagaggaggaagcggaagaacgagtcttctgaggagccgtcggacgacgagccgccg
cctcgccggtcctccagagaggacgattcgaagagaagatccaaccggcaggtgaagagg
aagaagtacgtggaggatggggagtcccgggtgtcggacgaggaggcgcgggtgatcgtc
aaggcgaagaagcccaagagcgcccccggccgcaagggcccgtccgctcagctgtttgtg
gagaaccccagtgaggaagatgctgccgtcgttgataaaatcatggcgtctcgtgtgctg
aagaacgaggtctctcctggagtcgtggttgaagtggaggagttcttcgtgaaatacaaa
aactactcctacctgcactgtgagtgggccactgagcagcgtctggtgagggacaagagg
atccagcagaagatcaaacgcttcaagatcaaacaggcgcagagggcgcacttcttcgcc
gacatagaggaggatccctttaaccctgattatgtggaggtggacagagttctggaagtg
tcatgctgtgaagacaaggactctggagagccggtggtgtattacctggtgaagtggtgc
tccctgccctacgaggacagcacttgggagctgaaggaggatgtggaccagctgaaggtg
gaggagtttgagcagttgcaggccatccggcccgacctgcgcagagtggagcgaccccca
gccagccactggaagaagagggagcattcccgggaatactgcaacggcaacagcctcagg
gactaccagctggagggagtcaactggctgctcttcaactggtataacagacggaactgc
atcctggctgatgagatgggcctgggaaaaaccatccagtccatcaccttcctggaggag
atccaccggacgggggtccgcgggcccttcctcatcatcgccccgctctccaccatcgcc
aactgggagcgggagttccgcacctggacgcagcccaacgtcatcgtgtaccacggcagc
ggggtcagccgccagatgctgcagcagtacgagatgtacttcagagacacacagggacgc
ccgatccacggcgcctacaagttccaggccgtcatcaccaccttcgagatgatcctgggc
ggctgccccgagctgaacgccatcgagtggcgctgcgtgatcatcgacgaggcgcaccgc
ctcaagaacaagaactgcaagctgctggagggcttcaagctgatgagcctggagcacaag
gtgctgctgacaggcactcccctgcagaacacggtggaggagctcttcagcctgctgcac
ttcctggagccatcccgcttcccctcggagaacaccttcctccaggagtttggggacctg
aagaccgaggagcaggtccagaagctccaggccatactgaagcccatgatgctcaggagg
ctgaaggaggacgtggagaagaagctggcccccaaagaggagactatcgtggaggtggag
ctcaccaacatccagaagaagtactaccgcgccatcctggagaagaacttctccttcctg
gccaagggagcgggccaggccaacgtgcccaacctggtcaacaccatgatggagctgcgc
aagtgctgtaaccacccctacctcatcaaaggggctgaggagaagatcctggaggacttt
cgggaggtgtacagcccgagcgccctggacttccacctgcaggccatggtgcagtccgcg
ggcaagctggtcctcatcgacaagctgctgcccaagatgaaggccgggggccacaaggtg
ctcatcttctcccagatggtgcgctgcctggacatcctggaggacttcctcattcagaga
aggtacctctatgagaggattgacgggcgcgtgcggggcaacctgcgccaggccgccatc
gaccgcttcagcaagccggactcggaccgcttcgtcttcctgctgtgcacgcgggcgggg
gggctgggcatcaacctgaccgccgccgacacctgcatcatcttcgactcggactggaac
ccgcagaacgacctgcaggcccaggctcgctgccaccggattggccaggacaaggcggtg
aaggtgtaccggctgatcacgcggaactcgtacgagcgggagatgttcgaccgcgccagc
ctgaagctgggcctggacaaggccgtgctgcagagcatgagcgggcgggagagcagcacg
ggcgggcagatccagcagcagctctccaagaaggagatcgaggacctgctgcgcaagggg
gcctacggcgccatcatggacgaggaggacgaaggctccaagttctgcgaggaagacatc
gaccagatcctgcagcgccgcaccaagaccatcaccatcgagtccgagggcaggggctcc
accttcgccaaggccagttttgtgtcgtctggaaacaggacggacatctcgctggacgac
cccaacttctgggacaagtgggccaagaaagcagagatcgacgtggcaacagtcaatggc
agaaacagcctggtcatcgacaccccacgggtccgcaagcagacgcgccccttcagcgcc
accaaagacgagctggccgagctgtcggagggcgagagcgacggcggcggggacaagccc
aaactgcgccgcccgcacgatcgcctcagcggctacggacgcaccgagtgcttccgcgtg
gagaagaacctgctggtgtacgggtggggccggtggaaggacatcctgctgcacggccgg
ttcaagcggccgctgagcgagcgcgatgtggagatgatctgccgggccctgctggcctac
tgcctggtgcattaccgtggcgacgacaagatcaagagcttcatgtgggacctgatcgcc
cctacagaggacggccgcacccgggaactgcagaaccacctgggtctgtccaccccagtc
ccccgggggaggaaggggaagaagatgaagactcaggtgagctccttcgacatccacaag
gccgagtggatcaggaagcacaaccctgagcacctccttcaggacgacggctacaagaag
cacctcaaacaccactgcaacaaggtgctgctgcgggtcagaatgctctactacctgaaa
caggaagtgatcggagaccagtgccagaatgttctaggcggtgcggactccagagaggtg
gaggtttgggttcctgagctggaccactccgagctcccgaccctctggtgggacgcacag
gccgacaagagtctcctgctgggagtgtacaagcacggctatgagaagtacaacaccatc
cgcgcggaccccgccctctgcttcctagagcgcgtgggacgtcccgacgacaaggccatc
gcggccgagcagcgagccaacgacttcatggacggggacgtggacgatccagaatacaag
ccggccccggctctgctgaaggatgatatggaggatgacgcctcctctccaggggacctg
gtcataacggacactgctggagacggcggggtggcgatggagggggacgtggcgtactgg
ccccccccctccgccctgacggcgcggctccggcggctgatcaccgcctcgcagcgctac
accaagagccgccagatccagcacatccaccagacccagcaggccgtgctgccgcagccc
tgcgccgcctcgcccgccctcaaccactccctcagccccaagatggccgccaagatggag
cggcagcagaggtggacccggcgagaagaggcggacttctaccgcgtggtgtccacgttc
ggcgtggtgttcgaccccgagctgggccgcttcgactggaccaagttccgcgccatggcc
cggctgcacaagaagacggacgagagtctgcgcaagtacctgcgcacttttaccgccatg
tgcagacgagtctgccgcctgccgcccagagacggggactcggtggacccatccatctcc
atccagccaatcacggaggagcgcgcgtcgcggacgctgtaccgcatcgagctgctgcgg
aaggtgcgggagcaggtgctgcgccacgcccagctgtacgagcggctggcgctgtgccag
gcggggccggacctgcccgtgtggtgggaggcgggcacgcacgaccgggacctgctgatc
ggcgctgccaagcacggcgtgagccgcacggactaccacatcctgcgcgaccccgagctc
tgcttcatgagcgcccagcgcaactacagccacgccaagggggccccgccccgcccgcac
ccgcccccgcccctcctgcagccccaccaccaggccgcgctggcgggctcccccctggcc
cggcagcccgacgccaggggccccccccgggacgaggagcgccggacgctgcccaaagag
gagccggtttcggacgaggaggagctcggggacgggagggcgcaggcggaggggtggagc
cccaggacgggcgccaggaccccgccggggccggacggcagacccggtcccggtaagggc
cccagcgagaagcgcatggtggcggcgcggaccaagccgctcacgccgaactccgccacg
cagaagcagaggaagccccgcaagaggagtcgcaaggaggcgcgcagggcctccgactcc
gacggctcctcctcctcgtcctcctcccgctcgtcctcctcctcctcttcctcctcatcc
tcctcctcctgctcccgctcgggctccagctcctcctcatcttcctcctcctgctcgtcc
ggatcctcgtcctcctcttcctcctcttcgtccgagggcagcgacagcgagggcgaagaa
cgaaagaaaactgcgaccgcggtccccagcgtgaaggccttcgacgaggacagcgtggcc
tccctcagcaccacgcaggacgagacgcaggacagctacctcaccgagaacggcctgccc
aactcgcaccaccccttccagggaggcttcatgctcgctgcctcctactggccaaaggac
cgagtcatgatcaaccggctggacagtatctgtcaggccgtcctgaagggccagtggccg
ggggcgcggcgtgcctacgagcccagtgtggtgtcctccttttacaccaccaagctgcgg
gacagccccggcgggccgggggacgccccgggcccccccggcccgggagaggagccccct
gcctctcctcagatgtcaaaggtgaagaagcatgttccagacaaggagtttacagtgaaa
atcaataaccaggaagggggtttgaagctgactttccagaagcagggcgtcccgcagaag
aggtcgctggagggcgaggagggccccctggggcagccgcagtacctggcccgtctgcag
gagctccagagcgcctcggacgccgccggcctcgccgaattcagccagccccccaccccc
gcccccgccgccgccgtgggccaggggttcccagggcatatgagggtcaacggggtcatg
gacggccagcctgtggtgaagaagagacgggggaggaggaagaacgtggagggcatggac
ctgctgttcatgaacaagacccgagtccctgtgacgccggagcaggtgcccgccgggtgg
agtggcagtgccaaggccagccctgccgcgggccccacgccggggttcggccagggcccg
gggcccgtggacacggagagcagggtccccgtcatcaacctcaaagacgggacgcggctc
gccggagacgacgcccccaagaggaaagacctggaactgtggctgagagagcacccgggc
ttcgtggctgacgttggggccttcatccccggggtcagcaaggtcccgtttccggaagtc
cggcccaagcagaagcggcaccgctgcagaaaccccaacaagatggacgtgaacagcctg
acgggcgaggagagggtgcagatcatcaacaggaggaacgcccggaaggtgggcggtgcc
ttcgcccccccgctgaaggacctgtgccgcttcctgcaggagaacccggagtacggcgtg
ccgccggagtgggccgacgtggtgaagcagtcggggtacctgcccgagagcatgttcgac
cgcatcctgaccggacccatcgtgcccgaggaggtgtgccgacgggggcggcgtcccaag
agcacgcaggccaaggcggcggcggcagcggcggcggcggccaacgcaggctccgccccc
ctgggcctcagccccctgctggccaatgggctgctgtcgggcatggacctgtccagcctg
caggcgctgcagcagaacctgcagagcctccagtccctgcagctgactgccggcctcatg
gggctgcccggggatgccggcagcctggccgccatgtttcccatgatgctctccggcatg
gccggccttcccaacctgctgggcctgagcagcctgctggggaaggcccaggagccggcc
gggggcgccgagcgcaagaggaagggaccccgcggcaaggggggggaccgctcggccccc
agggcccccaggacccccggctcggcccccagggcccccaggacccccggctcggccccc
agggcccccaggacctccggctcggaccccagggcccccaggacccccaggacccccggc
tcggaccccaaaggcgaaaggacagagggcgaaagcgctgagcctcgcgtcggcgacccc
ccctcctcctcctcctcttcctcctcctccagcattccaccaagtgcttctgccgcggcc
tcctcgggctccgcccacccgggggctctcaaccccttgctgctctccagcatgctgtac
ccagggatgctgctgcagcccggcctcgacctgcccgtctccccgccgccgcagcccggc
gcgttcgacacgaacgctggccccgccgccccgcccgccccccgcgtcacgcaggagcag
gggcggggggaggcggggaggaggcgcgagaaggaggagtccgggagcgagtccgcggac
cccaaggggaacagcggcgccgaaggctcggacaaaggggagtcctcttcgtcggagtcg
gacagctcctcttcgtcgtcgtcggactcggactccagcgatgaagactga
DBGET
integrated database retrieval system
