Anguilla anguilla (European eel): 118217201
Help
Entry
118217201 CDS
T07545
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
aang
Anguilla anguilla (European eel)
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aang03019
]
118217201
Messenger RNA biogenesis [BR:
aang03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
118217201
3'-5' decay
Other 3'-5' decay factors
118217201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_30
AAA_19
PhoH
UvrD-helicase
PAM2
zf-CCCH
ResIII
Mov-10_helical
AAA_22
AAA_16
AAA_25
AAA_5
AAA
DEAD
AAA_7
Motif
Other DBs
NCBI-GeneID:
118217201
NCBI-ProteinID:
XP_035254926
LinkDB
All DBs
Position
2:48491422..48524804
Genome browser
AA seq
1622 aa
AA seq
DB search
MGESEPDVVCAQVCEHLSRQEYHLALCCCDEVLAVPPSPTTSSTGTTTLPEDHCVHVLAL
LCRVSAHVQLKKFTAAEEDSKNVMCLQELLGDGTLKDLLVSMLLDGRLTEICQALFNCDS
EEWKENEGNMKYFRQLMLLLTESQVSSSAARVSEEDGREGILVERRWKHRAPPRGVLGID
EYTLCLRFLHGGECPLGELCVSAHSHGELLEWRQRLLFGRLQGQRARRARDPADSYGESL
VEKWMRNPLPHTVVSSSMLGVTVDCVPDLHQAICQKHCSVSWTLRLDCNPPRPLRRVALL
SELHRALFRIAGVAVGGSDGGPQPRPPSQPQQEWSCDGGGRGLAAERVYQVTLLLTAHAF
GSFQQTVVFDFGSEPVLLQTVSAELAPPTDLALEPQPRGAVSSVRWDSGCKQVTVVGFLP
RDEAPLDQSLLQAYQIPAAADQLFTRSVLDRSLTPHNYRSRLHDLLYIEENAQYMELSRL
SLQTSLRLVTAPTVPGLQDGAGPLLPGQLFAQMGLSGTGVRRDTAGGRLVWDTVDSVLVL
PALGQQAGAGAGGRERVYEAQVEERRPECMLLRLSEDCCRDLRLQPDQDLQVELQFQLNR
LPLCEMHFALDSLQDCCTLLFPEPPSAGAPPSFSSVEGMDARLNEQQRAALGVITAPLSL
QLPPVLLCGPPGTGKTFTLLQATVALLGEDINRVLLCSQSEAAADALMNELQIMLGHSTS
EDWLLRLQGCSRPGKYAVAAAQCCSGIAHSTAAEIQQPWREEVNRSRVVVCTVRQAKHLI
QLRLDTGCFTHVLVDEASSAPECETVMALSLAGPSTRVVLAGDPAQLPPLVYSEFARERG
LQRPLLERLSGLYPQDSSCWVKLTEQYRSQQHIVRLVSELFYKGELRAGSKQPVHKDFFP
LSFFVAWGTDKSGCGYLNYAEVLEVAEQVENLCKKWPVSWGKLEEGSVGVLTPYPSQALC
LRSELQRRNLSCAAVQTLVTLPGRYFRVLFLSTVRTRHSLKQQVVGGASGASGARRREAA
QEEEESVEDRELGFLSSPRALRSVLLCAQSLLAVVGDPVALCTMGKCRRIWERFLSACAS
EGSLHGATLPGLLEQVDVVESRCGGVLNPLAPEFVPRGPASPALTRRLPASLPRITVKRS
SSQPFKQPLQRERYGQVGPCVPQGAPPYLLALSSGRPCVYGRSPSPLPRLGPLSRTGLVC
DPYRSRLLVPVPLSLSCSGYANRVPVDPRVVACQAAVAYNFNLLQTPASPASTGLSPRLR
SPPQSYRSPTDSSLDPGRAGADSGRAGEGPGRAGADSGRTGLGTLCLWPESEGREQVAGG
LGFRRSRSPGLPHLEPCSTPTLPSSRPYSSPSPPPFGRDGSPPPFRTSPELGHPYCSRLP
GGGLCHPSMQNGSYGSGRCGDEEPSGYSPWAEQNSLPLSPLLHSAQTSPFPPGDSPLHSP
TTSPGSSLGYGTEDSWASLGSFSSSAQAFQHSPLEQRTRSGPELYCSPRPSPRPSPAECA
EGEWMGGRRLYQRSSSSLCTTGASPPSRADGDPSPPSSFSVWAQERQSTHHEEKAYPASG
PGETGRSGETGGELGGVQSSEVHLQSAWACASQVQPNDPLALLQELGRRGDQEDSAYYSY
FH
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagagcgagcctgatgtcgtatgtgcccaagtgtgcgagcacctcagcaggcaa
gagtaccacctggctctttgttgctgtgatgaggtactggccgtgccacctagtcccacc
acctcctccaccggaaccaccaccttgcctgaagaccactgtgtccatgtgctggcactg
ctgtgccgagtctctgcccatgttcagttgaaaaaattcacagcagctgaagaggacagc
aaaaatgtaatgtgcctgcaggagttgctgggagacgggactctgaaagatctgctggtc
agtatgttactggatggcaggctaacagagatttgccaggctttgttcaactgtgacagt
gaagaatggaaggagaatgaaggtaacatgaagtatttcaggcaattgatgctacttttg
acagaatcacaggtgtccagtagtgctgctagagtttcggaagaggatggcagggaaggg
attctggtggagcgacgctggaagcacagagcccctccccgaggtgtactgggaatcgat
gagtataccttatgtctcaggttccttcacggcggcgagtgcccgctgggcgagctgtgc
gtctcggcccactcccacggcgagctgctggagtggcggcagaggctgctgttcggtcgg
ctgcagggccagcgagctcgccgcgcccgcgatcccgcggacagctacggcgagagcctg
gtggagaagtggatgaggaatccgctcccgcacactgtggtgagctccagcatgctgggg
gtgactgtggactgcgtgccggacctccaccaggctatttgccagaagcactgctctgtc
agctggaccctgcggctggactgcaacccccctcgaccgctgcgtcgcgtggccctgctc
agcgagctgcaccgcgccctgttccgcatcgcgggcgtggccgtcggcggctccgacggc
ggcccgcagccccgccctccgagccagccgcagcaggagtggagctgcgacggcggtggg
cggggcctagcggcggagcgcgtgtaccaggtgaccctgctcctcaccgcgcacgccttc
ggcagcttccagcagaccgtggtgtttgacttcggctcggagcccgtgctgctccagacg
gtctcggccgagttggccccgcccacagacctggcgctggagccgcagccgcggggcgcg
gtgtcgtcggtgcgctgggactccggctgcaagcaggtgacggtggtgggcttcctgccc
cgagacgaggccccgctggaccagtccctgctgcaggcctaccagatccccgccgccgcc
gaccagctcttcacccgctcggtcctggaccggagcctcaccccccacaactaccgctcc
cgcctccacgacctgctctacatcgaggagaacgcgcagtacatggagctcagcaggttg
agcctgcagacgtccctgcgcctggtgaccgctcccacggtgcccgggctccaggacggc
gcggggcccctgctgcccggccagctcttcgcccagatgggtctgagcggcaccggggtg
cggcgggacacggcgggagggcggctggtttgggacacggtggacagcgtcctcgtcctg
cccgcgctgggccagcaggcgggggcgggggcggggggcagggagcgggtgtacgaggcc
caggtggaggagcgccgtccggagtgcatgctgctcaggctctcagaggactgctgccgc
gacctgagactgcagccagaccaagacctgcaggtggagctgcagttccagctgaacagg
ctgccgctgtgtgagatgcactttgctttggactccctgcaggactgctgcaccctgctc
tttccagagcccccctctgctggagcgcccccctctttctccagtgttgaggggatggat
gccaggttgaacgagcagcagagggcagccctgggggtcatcaccgcacccctttccctg
cagctgccccctgtcctgctgtgtggtccccctggcacaggaaaaaccttcactctgctc
caggccacagtggcactgctgggagaggacatcaacagggtgttgttgtgctcacagtcg
gaagcagcggctgacgcgctcatgaatgagctccagattatgctggggcattccacctct
gaagactggctgctcaggctgcaggggtgcagcaggccggggaaatatgccgtggccgca
gcgcagtgctgcagtggaatcgctcacagcaccgccgcagagatccagcagccgtggagg
gaggaggtgaacaggagcagggtggtggtctgcaccgtgcgccaggccaagcatctcatc
cagctcaggctggacacagggtgtttcactcacgttctggtggacgaggcctcgtcggcg
cccgagtgcgagaccgtgatggcgctctccttggccggcccctctacccgcgtggtgctg
gcgggggaccccgcccagctcccaccattggtgtacagtgaatttgcccgtgagcgaggt
ctgcagcgccccctgctggagcggctttctgggctttatcctcaggacagtagctgttgg
gtgaagctcactgagcaataccgctcacagcagcacatcgtcaggctggtctctgagctg
ttctataagggggagctgagggcaggcagcaaacagcccgtccacaaagacttcttcccc
ctctctttcttcgtggcgtgggggacggacaagagcggctgtgggtacctcaactacgca
gaggtgttggaggtggcggagcaggtggagaacctgtgtaagaagtggccggtgtcgtgg
ggcaagctggaagagggcagcgtgggggtgctgacgccctaccccagtcaggccctgtgc
ctgcgctcagaactgcagcgccgcaacctcagctgcgcagctgtgcagacgctcgtcacc
ctgccggggcgctactttcgcgtgctgttcctcagcaccgttcggacgcgccactccctt
aagcagcaggtggtgggcggggcctcgggcgcctccggagcgcggcgcagggaggccgcc
caggaggaggaggagtctgtggaggacagggagctgggcttcctctcctcgccacgggcc
ctgcgctccgtcctgctctgcgctcagtccctgctggccgtggtgggagaccccgtggct
ctttgcaccatggggaagtgcagaaggatctgggagcgcttcctgtccgcgtgcgcctcc
gaggggagcctgcacggggccaccctgcccggcctgctggagcaggtggacgtcgtggag
tccaggtgcggcggcgtcctcaaccccctggcgcctgagtttgtgccccgcgggcccgcc
agccccgccctgacccgccggctgcccgcctcgctgccccgcatcacggtgaagcggtca
tcttcacagcccttcaagcagccgctgcagagggaacgttacggtcaggtgggcccctgc
gtgcctcagggcgccccgccctacctcctggccctgtcctcggggcggccctgtgtgtac
gggaggagccccagccccctgccgcgcctcggccccctcagcaggaccggcctggtgtgc
gacccgtaccgcagccgcctgctcgtgcccgtccccctgtccctctcctgctccggctat
gccaaccgcgtgcccgttgacccgcgggtggtggcgtgccaggccgccgtggcctacaac
ttcaacctgctgcagacgcctgccagcccagcgtccaccggcctcagcccccgccttcgc
tctcccccacagtcctacaggagccccaccgacagcagcctggatcctgggagagcaggt
gcggattctgggagagcaggtgagggtcctgggagagcaggtgcggattctgggagaaca
ggtttggggaccctgtgtctgtggccggagtccgagggaagggagcaggttgcgggaggc
ttgggattccggcggagccgatccccggggctgcctcatttggagccgtgctccaccccc
acgcttcccagctcccggccttactccagcccctcgccccccccgttcggccgcgacggc
tccccccctcccttcagaacgtcccccgagctgggccacccctattgctctcgccttccc
gggggcggcctttgccacccctccatgcagaatggaagctacgggagcgggagatgtgga
gacgaggagccctccgggtactccccgtgggcagagcagaacagcctgccgctgtcccct
ctcctgcacagcgcacaaacatcgccgtttccgccaggggactccccccttcactcgcca
accaccagccccggcagctccctggggtacgggaccgaggacagctgggcctccctggga
agcttctcctcctccgcccaggctttccagcattcgcccctggagcagcgcacgcggagc
gggcccgagctctactgcagccccaggcccagccccaggcccagtcctgccgaatgtgcg
gaaggcgagtggatgggtgggcggaggctgtaccagcggagctcctcctctctctgtacc
acgggggcgtctcccccgtcccgggctgacggagaccccagcccccccagcagcttctcc
gtgtgggcccaggagagacagagcacgcaccacgaggagaaggcttaccccgcatctgga
cctggtgagaccgggcggagcggggagacaggtggagagctgggtggggttcagtccagt
gaggtccacctccagagtgcctgggcgtgtgccagccaggtgcagcccaatgaccccctg
gccctgctgcaggagttgggccgcaggggcgaccaagaggacagtgcatactactcttac
ttccactga
DBGET
integrated database retrieval system
